Humaine - Aix-Marseille Université

 POLE HOSPITALIER
MALADIES INFECTIEUSES
CHEF DE PÔLE :
Professeur Philippe Brouqui
ADRESSE :
Hôpital Nord, Pavillon Frioul
Service des maladies infectieuses et tropicales
Chemin des Bourrely
13915 MARSEILLE
TELEPHONE :
04 91 96 89 35/36 (CHU Nord) – 04 91 32 43 75 (URMITE)
COURRIEL :
[email protected] ou [email protected]
ECOLE DOCTORALE : Sciences de la Vie et de la Santé d'Aix-Marseille Université
RATTACHEMENTS : URMITE /AMU/CNRS/IRD/INSERM/Méditerranée Infection
DISCIPLINES D’APPARTENANCES :
Microbiologie, maladies transmissibles et hygiène
SPECIALITÉS :
Maladies infectieuses et tropicales
Rickettsies - Bactériologie - virologie - hygiène hospitalière
Parasitologie et mycologie
Bioinformatique, Biologie Structurale et Génomique (BBSG)– Pathologie
Humaine
EFFECTIFS
Enseignants-Chercheurs
(PU-PH, MCU-PH, CCA, AHU) :
Personnel Hospitalier (PH, Attaché) :
Personnel Médico-Technique :
Personnel Administratif :
Ingénieurs :
Etudiants et internes :
19
7
107 dont 22 affectés sur l’unité de recherche
31 dont 11 affectés sur l’unité de recherche
20 dont 10 affectés sur l’unité de recherche
35
PERSONNELS RATTACHÉS A UNE EQUIPE DE RECHERCHE
PERSONNEL MEDICAL :
PROF.UNIV-PH
RAOULT DIDIER
BROUQUI PHILIPPE
ROLAIN JEAN-MARC
STEIN ANDREAS
MEGE JEAN-LOUIS
Pôle hospitalier. Maladies Infectieuses
Mise à jour : janvier 2016
1/13 NICOLAS DE LAMBALLERIE XAVIER
PAROLA PHILIPPE
CHARREL REMI
COLSON PHILIPPE
DRANCOURT MICHEL
LA SCOLA BERNARD
FENOLLAR FLORENCE
FOURNIER PIERRE-EDOUARD
Maitre de conférences
GOURIET FREDERIQUE
NINOVE LAETITIA
NOUGAIREDE ANTOINE
EDOUARD SOPHIE
Chef de Clinique assistant
MILLION MATTHIEU
AHU
DUBOURG GREGORY
PH
CASALTA Jean-Paul
GAUTRET Philippe
LEVY Pierre-Yves
TAMALET Catherine
Attachés
ANGELAKIS Emmanouil
SENG PISETH
MOTTE Anne
SOIGNANTS
BOUDJEMA Sophia
FLORA Olga
LEGRAS Isabelle
PERSONNEL NON MEDICAL :
ENCADREMENT
Véronique FILOSA, cadre Médico-technique
Laure GAMBARELLI, cadre administratif
ADMINISTRATIFS

Secrétariat Pr RAOULT
Priscilla BARRACO
Ivana DOMINGO
Marion FERNANDEZ
Marie TUSA
Caroline TOUATI

Secrétariat Pr DRANCOURT
Olga LOUKHNEVA
Sandrine LONGINOTTI

Secteur étudiants
Valérie FILOSA

Secteur bibliothèque
Abdelkrim OUANEZAR
Pôle hospitalier. Maladies Infectieuses
Mise à jour : janvier 2016
2/13 INGENIEURS
BUFFET SYLVAIN, responsable plateforme informatique

Secteur biologie moléculaire
BEDOTTO MARIELLE
PRUDENT Elsa

Secteur bioinformatique
BAPTISTE Emeline
CAPUTO Aurelia
DELERCE Jeremy

Secteur cristallographie
PINAULT Lucile

Secteur spectro de masse
FLAUDROPS CHRISTOPHE
DECLOQUEMENT PHILIPPE
ARMSTRONG NICHOLAS
TECHNICIENS DE LABORATOIRE
AMPHOUX Bernard
COSTAGLIOLA D ABELE Olivier
GROS Thierry
BROSSARD Catherine
BARRASSI Lina
RAYMOND Pascale
JARDOT Priscilla
VIAL Emeline
PERREAL Céline
DUCLOS Nathalie
GRIMALDIER Clio
CAL Céline
LE BIDEAU Marion
MATI Marie-Charlotte
DOUDON Emilie
JUNOY Stéphanie
RODRIGUEZ Julie
N GUYEN Thi Tien
RICHEZ Magali
BERENGER Jean-Michel
ABEILLE Annick
ESTEL Michèle
TANDA Samantha
TOROSSIAN Danielle, Agent de service hospitalier
Pôle hospitalier. Maladies Infectieuses
Mise à jour : janvier 2016
3/13 THESES DE DOCTORAT ANNÉE 2014
Nom Prénom
Sujet
GONZALEZ Daniel
IROUNGOU Berthe
YSSOUF Amina
KEITA Alpha
ROULI Laetitia
HUGON Perrine
DRALI Rezak
PADMANABHAN Babu
Roshan
KA Mignane Biram
KEITA Mamadou Boye
BENKOUITEN Samir
PRASSAD ABNAVE
ESETA Bersissa
HRAIECH Sami
SENGHOR Bruno
SOBHY Haitham
Les protéines DING et les "Nanons"
Syndrome fébrile non bactérien en milieu pédiatrique à
Franceville au Gabon
Identification des Arthropodes vecteurs et des microorganismes associés par MALDI-TOF MS
Microbiote instestinal des gorilles : évaluation de la
diversité bactérienne, détection des pathogène et
description des nouvelles espèces
Etude systématique des génomes bactériens
«Etablissement du répertoire humain des procaryotes et
diversité du microbiote digestif par approches variées »
Poux,Génotype,Classification,Evolution,Résistance aux
insecticides,Différentiation
Date
thèse
23/06/2014
15/09/2014
06/10/2014
31/10/2014
31/10/2014
31/10/2014
15/12/2014
09/12/2014
KA Mignane Biram
céllules immunes, fiévre Q, molecules de cosignalisation,PD-1,endocardite,IL-10
Microbiote intestinal des Gorilles
01/12/2014
31/10/2014
Les infections respiratoires aiguës chez les pèlerins du Hajj
Explorer l'immunité des mammifères contre les bactéries
intracellulaires à partir des planaires
Recherche moléculaire des arthropodes et des bactéries
VECTEUR DE L'ETHIOPIE
Evaluation de stratégies thérapeutiques dans des modèles
murins de pneumonie
Etude de la dynamique de transmission saisonnière de
Schistosoma Haematobium dans les écosystèmes pluviotemporaires de Niakhar
Characterization of proteins involved in the fibers of
Mimivirus
12/11/2014
25/11/2014
02/12/2014
16/12/2014
22/12/2014
26/09/2014
CONTRATS ANNÉE 2014
Eric Chabrière
Philippe Parola
Etude préliminaire de
Décontamination des Agents
Neurotoxiques par Utilisation de
BioEpurateurs
REMEDIER
DGA
2014
AMU
AMIDEX
2014
AMU
BREVETS ANNÉE 2014
Use of an acellular empirical culture medium for
the growth of intracellular bacteria
2014-12-03
Sulfolobal phosphotriesterase-like (pll)
lactonases activity having enhanced properties
and the uses thereof
2014-10-16
Use of an antioxidant compound for cultivating
bacteria sensitive to oxygen tension
2014-05-01
Raoult Didier
Kowalczewska
Malgorzata
Singh Sudhir Kumar
Chabriere Eric Elias Mikael
Hiblot Julien
Raoult Didier
Fondation
Méditerranée
Infection Drancourt Michel La Scola Bernard Raoult Didier Fond Mediterranee
Infection Pôle hospitalier. Maladies Infectieuses
Mise à jour : janvier 2016
CNRS
AMU
4/13 Method for the diagnosis of rosacea
2014-02-13
Aubert Jerome Murillo Nathalia Raoult Didier
Galderma Res & Dev CNRS
AMU
Nucleic acid fragments and specific detection
method by molecular identification of different
bacteria species of the genus Acinetobacter
2014-02-06
La Scola Bernard
Raoult Didier
AMU
CNRS
Marker of pathogenicity in Salmonella
2014-01-09
de la Cruz Villegas
Miguel Angel
Meresse Stephane
Gorvel Jean-Pierre
Raoult Didier
INSERM
CNRS
AMU
PUBLICATIONS ANNÉE 2014
1.
Abrahão JS, Boratto P, Dornas FP, Silva LC, Campos RK, Almeida GM, Kroon EG, La Scola B. Growing
a giant: evaluation of the virological parameters for mimivirus production. J Virol Methods. 2014
Oct;207:6-11
2.
Aherfi S, Boughalmi M, Pagnier I, Fournous G, La Scola B, Raoult D, Colson P. Complete genome
sequence of Tunisvirus, a new member of the proposed family Marseilleviridae. Arch Virol. 2014
Sep;159(9):2349-58.
Aherfi S, La Scola B, Pagnier I, Raoult D, Colson P. The expanding family Marseilleviridae.
Virology. 2014 Oct;466-467:27-37
Aherfi S, Solas C, Motte A, Moreau J, Borentain P, Mokhtari S, Botta-Fridlund D, Dhiver C, Portal I,
Ruiz JM, Ravaux I, Bregigeon S, Poizot-Martin I, Stein A, Gérolami R, Brouqui P, Tamalet C, Colson
P. Hepatitis C virus NS3 protease genotyping and drug concentration determination during triple
therapy with telaprevir or boceprevir for chronic infection with genotype 1 viruses, southeastern
France. J Med Virol. 2014 Nov;86(11):1868-76.
Aherfi S, Borentain P, Raissouni F, Le Goffic A, Guisset M, Renou C, Grimaud JC, Hardwigsen J, Garcia
S, Botta-Fridlund D, Nafati C, Motte A, Le Treut YP, Colson P, Gerolami R. Liver transplantation for
acute liver failure related to autochthonous genotype 3 hepatitis E virus infection. Clin Res Hepatol
Gastroenterol. 2014 Feb;38(1):24-31.
Al Bayssari C, Diene SM, Loucif L, Gupta SK, Dabboussi F, Mallat H, Hamze M, Rolain JM. Emergence
of VIM-2 and IMP-15 carbapenemases and inactivation of oprD gene in carbapenem-resistant
Pseudomonas aeruginosa clinical isolates from Lebanon. Antimicrob Agents Chemother. 2014
Aug;58(8):4966-70.
Alauzet F, Ambrosetti D, Geoffray A, Devred P, Dubus JC, Giovannini-Chami L. Fetal retained lung
fluid: not always bilateral. J Pediatr. 2014 Jun;164(6):1498-1498.e1.
Angelakis E, Mediannikov O, Socolovschi C, Mouffok N, Bassene H, Tall A, Niangaly H, Doumbo O,
Znazen A, Sarih M, Sokhna C, Raoult D. Coxiella burnetii-positive PCR in febrile patients in rural and
urban Africa. Int J Infect Dis. 2014 Nov;28:107-10.
Angelakis E, Million M, Kankoe S, Lagier JC, Armougom F, Giorgi R, Raoult D. Abnormal weight
gain and gut microbiota modifications are side effects of long-term doxycycline and
hydroxychloroquine treatment. Antimicrob Agents Chemother. 2014 Jun;58(6):3342-7.
Angelakis E, Raoult D. Pathogenicity and treatment of Bartonella infections. Int J Antimicrob Agents.
2014 Jul;44(1):16-25
Angelakis E, Yasir M, Azhar EI, Papadioti A, Bibi F, Aburizaiza AS, Metidji S, Memish ZA, Ashshi AM,
Hassan AM, Harakeh S, Gautret P, Raoult D. MALDI-TOF mass spectrometry and identification of new
bacteria species in air samples from Makkah, Saudi Arabia. BMC Res Notes. 2014 Dec 9;7:892.
Angelakis E, Raoult D. Methods for the discovery of emerging pathogens. Microb Pathog. 2014
Dec;77:114-8.
Angelakis E, Edouard S, Lafranchi MA, Pham T, Lafforgue P, Raoult D. Emergence of Q fever
arthritis in France. J Clin Microbiol. 2014 Apr;52(4):1064-7.
Angelakis E, Azhar EI, Bibi F, Yasir M, Al-Ghamdi AK, Ashshi AM, Elshemi AG, Raoult D. Paper
money and coins as potential vectors of transmissible disease. Future Microbiol. 2014;9(2):249-61.
Angelakis E, Bibi F, Ramasamy D, Azhar EI, Jiman-Fatani AA, Aboushoushah SM, Lagier JC, Robert
C, Caputo A, Yasir M, Fournier PE, Raoult D. Non-contiguous finished genome sequence and
description of Clostridium saudii sp. nov. Stand Genomic Sci. 2014 Dec 8;9:8.
Appelt S, Fancello L, Le Bailly M, Raoult D, Drancourt M, Desnues C. Viruses in a 14th-century
coprolite. Appl Environ Microbiol. 2014 May;80(9):2648-55.
Appelt S, Armougom F, Le Bailly M, Robert C, Drancourt M. Polyphasic analysis of a middle ages
coprolite microbiota, Belgium. PLoS One. 2014 Feb 28;9(2):e88376.
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Bakour S, Touati A, Bachiri T, Sahli F, Tiouit D, Naim M, Azouaou M, Rolain JM. First report of 16S
rRNA methylase ArmA-producing Acinetobacter baumannii and rapid spread of metallo-β-lactamase
NDM-1 in Algerian hospitals. J Infect Chemother. 2014 Nov;20(11):696-701.
Belbel Z, Chettibi H, Dekhil M, Ladjama A, Nedjai S, Rolain JM. Outbreak of an armA
methyltransferase-producing ST39 Klebsiella pneumoniae clone in a pediatric Algerian Hospital. Microb
Drug Resist. 2014 Aug;20(4):310-5.
Benamar S, La Scola B, Croce O. Genome Sequence of Afipia felis Strain 76713, Isolated in Hospital
Water Using an Amoeba Co-Culture Procedure. Genome Announc. 2014 Dec 24;2(6).
Bendjama E, Loucif L, Diene SM, Michelle C, Gacemi-Kirane D, Rolain JM. Non-contiguous finished
genome sequence and description of Paucisalibacillus algeriensis sp. nov. Stand Genomic Sci. 2014
Mar 18;9(3):1352-65
Bendjama E, Loucif L, Diene SM, Michelle C, Gacemi-Kirane D, Rolain JM. Non-contiguous finished
genome sequence and description of Bacillus massilioalgeriensis sp. nov. Stand Genomic Sci. 2014 Mar
30;9(3):1046-61.
Benkouiten S, Brouqui P, Gautret P. Non-pharmaceutical interventions for the prevention of
respiratory tract infections during Hajj pilgrimage. Travel Med Infect Dis. 2014 Sep-Oct;12(5):429-42.
Benkouiten S, Minodier P, Raoult D, Brouqui P. Obtaining informed consent in pediatric clinical trials.
J Clin Epidemiol. 2014 Jul;67(7):840-1.
Berrazeg M, Diene S, Medjahed L, Parola P, Drissi M, Raoult D, Rolain J. New Delhi Metallo-betalactamase around the world: an eReview using Google Maps. Euro Surveill. 2014 May 22;19(20). pii:
20809.
Bittar F, Keita MB, Lagier JC, Peeters M, Delaporte E, Raoult D. Gorilla gorilla gorilla gut: a potential
reservoir of pathogenic bacteria as revealed using culturomics and molecular tools. Sci Rep. 2014 Nov
24;4:7174.
Boratto P, Albarnaz JD, Almeida GM, Botelho L, Fontes AC, Costa AO, Santos Dde A, Bonjardim CA, La
Scola B, Kroon EG, Abrahão JS. Acanthamoeba polyphaga mimivirus prevents amoebal encystmentmediating serine proteinase expression and circumvents cell encystment. J Virol. 2015
Mar;89(5):2962-5
Borentain P, Colson P, Dhiver C, Gregoire E, Hardwigsen J, Botta-Fridlund D, Garcia S, Gerolami R.
Successful treatment with sofosbuvir of fibrosing cholestatic hepatitis C after liver transplantation in an
HIV-HCV-coinfected patient. Antivir Ther. 2015;20(3):353-6.
Bouricha M, Castan B, Duchene-Parisi E, Drancourt M. Mycobacterium marinum infection following
contact with reptiles: vivarium granuloma. Int J Infect Dis. 2014 Apr;21:17-8.
Boutellis A, Abi-Rached L, Raoult D. The origin and distribution of human lice in the world. Infect
Genet Evol. 2014 Apr;23:209-17.
Brouqui P, Ippolito G. Ebola and travel--management of imported cases. Travel Med Infect Dis. 2014
Nov-Dec;12(6 Pt A):561-2.
Brouqui P, Jouve E, Romain F, Sambuc R, Raoult D. Are infectious disease doctors better at caring
for infectious diseases than other specialists? Clin Infect Dis. 2014 May;58(10):1486-7.
Brégeon F, Brioude G, De Dominicis F, Atieh T, D'Journo XB, Flaudrops C, Rolain JM, Raoult D,
Thomas PA. MALDI-ToF mass spectrometry for the rapid diagnosis of cancerous lung nodules. PLoS
One. 2014 May 15;9(5):e97511
Cassir N, Hraiech S, Nougairede A, Zandotti C, Fournier PE, Papazian L. Outbreak of adenovirus
type 1 severe pneumonia in a French intensive care unit, September-October 2012. Euro Surveill.
2014 Oct 2;19(39). pii: 20914.
Cassir N, Croce O, Pagnier I, Benamar S, Couderc C, Robert C, Raoult D, La Scola B. Noncontiguous finished genome sequence and description of Bacteroides neonati sp. nov., a new species
of anaerobic bacterium. Stand Genomic Sci. 2014 Apr 4;9(3):794-806.
Cassir N, Rolain JM, Brouqui P. A new strategy to fight antimicrobial resistance: the revival of old
antibiotics. Front Microbiol. 2014 Oct 20;5:551.
Chabrière E, Gonzalez D, Azza S, Durand P, Shiekh FA, Moal V, Baudoin JP, Pagnier I, Raoult D.
Fetuin is the key for nanon self-propagation. Microb Pathog. 2014 Aug;73:25-30.
Chisu V, Masala G, Foxi C, Socolovschi C, Raoult D, Parola P. Rickettsia conorii israelensis in
Rhipicephalus sanguineus ticks, Sardinia, Italy. Ticks Tick Borne Dis. 2014 Jun;5(4):446-8.
Colson P, Ravaux I, Tourrès C, Stein A, Tamalet C. Detection of the newly characterized HIV
CRF56_cpx in Marseille, southeastern France. Int J Infect Dis. 2014 Dec;29:241-3
Colson P, Ravaux I, Tamalet C, Glazunova O, Baptiste E, Chabriere E, Wiedemann A, Lacabaratz C,
Chefrour M, Picard C, Stein A, Levy Y, Raoult D. HIV infection en route to endogenization: two cases.
Clin Microbiol Infect. 2014 Dec;20(12):1280-8
Croce O, Robert C, Raoult D, Drancourt M. Draft Genome Sequence of Mycobacterium vulneris DSM
45247T. Genome Announc. 2014 May 8;2(3). pii: e00370-14.
Croce O, Robert C, Raoult D, Drancourt M. Draft Genome Sequence of Mycobacterium farcinogenes
NCTC 10955. Genome Announc. 2014 May 29;2(3). pii:e00523-14.
Croce O, Robert C, Raoult D, Drancourt M. Draft Genome Sequence of Mycobacterium mageritense
DSM 44476T. Genome Announc. 2014 May 1;2(2). pii:e00354-14.
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Croce O, Hugon P, Lagier JC, Bibi F, Robert C, Azhar EI, Raoult D, Fournier PE. Genome Sequence
of Bacillus simplex Strain P558, Isolated from a Human Fecal Sample. Genome Announc. 2014 Dec
11;2(6). pii: e01241-14.
Croce O, Robert C, Raoult D, Drancourt M. Draft Genome Sequence of Mycobacterium asiaticum
Strain DSM 44297. Genome Announc. 2014 Apr 17;2(2). pii: e00320-14.
Croce O, Robert C, Raoult D, Drancourt M. Draft Genome Sequence of Mycobacterium
austroafricanum DSM 44191. Genome Announc. 2014 Apr 17;2(2). pii: e00317-14.
Croce O, Robert C, Raoult D, Drancourt M. Draft Genome Sequence of Mycobacterium cosmeticum
DSM 44829. Genome Announc. 2014 Apr 10;2(2). pii:e00315-14.
D'Amato F, Robert C, Azhar EI, Fournier PE, Raoult D. Draft Genome Sequence of Coxiella burnetii
Strain Cb196, an Agent of Endocarditis in Saudi Arabia. Genome Announc. 2014 Nov 26;2(6). pii:
e01180-14.
D'amato F, Million M, Edouard S, Delerce J, Robert C, Marrie T, Raoult D. Draft genome sequence
of Coxiella burnetii Dog Utad, a strain isolated from a dog-related outbreak of Q fever. New Microbes
New Infect. 2014 Jul;2(4):136-7.
D'Amato F, Rouli L, Edouard S, Tyczka J, Million M, Robert C, Nguyen TT, Raoult D. The genome of
Coxiella burnetii Z3055, a clone linked to the Netherlands Q fever outbreaks, provides evidence for the
role of drift in the emergence of epidemic clones. Comp Immunol Microbiol Infect Dis. 2014 Dec;37(56):281-8.
De la Cruz MA, Zhao W, Farenc C, Gimenez G, Raoult D, Cambillau C, Gorvel JP, Méresse S. A toxinantitoxin module of Salmonella promotes virulence in mice. PLoS Pathog. 2013;9(12):e1003827.
Delabre S, Parola P, Thiberville D, Brouqui P, Delmont J, Gautret P. Non-ophthalmological
presentation of imported loiasis. Travel Med Infect Dis. 2014 Jul-Aug;12(4):406-9.
Delord M, Socolovschi C, Parola P. Rickettsioses and Q fever in travelers (2004-2013). Travel Med
Infect Dis. 2014 Sep-Oct;12(5):443-58
Desnues C, Raoult D. Reply to Sauvage et al. J Infect Dis. 2014 Dec 15;210(12):2018-9.
Diatta G, Mediannikov O, Sokhna C, Bassene H, Socolovschi C, Ratmanov P, Fenollar F, Raoult D.
Prevalence of Bartonella quintana in patients with fever and head lice from rural areas of Sine-Saloum,
Senegal. Am J Trop Med Hyg. 2014 Aug;91(2):291-3.
Dieme C, Yssouf A, Vega-Rúa A, Berenger JM, Failloux AB, Raoult D, Parola P, Almeras L. Accurate
identification of Culicidae at aquatic developmental stages by MALDI-TOF MS profiling. Parasit Vectors.
2014 Dec 2;7:544.
Diene SM, Rolain JM. Carbapenemase genes and genetic platforms in Gram-negative bacilli:
Enterobacteriaceae, Pseudomonas and Acinetobacter species. Clin Microbiol Infect. 2014
Sep;20(9):831-8.
Diene SM, Fenollar F, Fall B, Sow K, Niang B, Samba Ba P, Wade B, Raoult D, Rolain JM. CTX-M-15producing Morganella morganii from Hôpital Principal de Dakar, Senegal. New Microbes New Infect.
2014 Mar;2(2):46-9.
Dornas FP, Silva LC, de Almeida GM, Campos RK, Boratto PV, Franco-Luiz AP, La Scola B, Ferreira PC,
Kroon EG, Abrahão JS. Acanthamoeba polyphaga mimivirus stability in environmental and clinical
substrates: implications for virus detection and isolation. PLoS One. 2014 Feb 3;9(2):e87811.
Doudier B, Vencatassin H, Aherfi S, Colson P. Fatal fulminant hepatitis E associated with autoimmune
hepatitis and excessive paracetamol intake in Southeastern France. J Clin Microbiol. 2014
Apr;52(4):1294-7.
Drancourt M, Prebet T, Aghnatios R, Edouard S, Cayrou C, Henry M, Blaise D, Raoult D.
Planctomycetes DNA in febrile aplastic patients with leukemia, rash, diarrhea, and micronodular
pneumonia. J Clin Microbiol. 2014 Sep;52(9):3453-5.
Drancourt M, Raoult D. Yersinia pestis and the three plague pandemics. Lancet Infect Dis. 2014
Oct;14(10):918-9.
Drancourt M. Microbe discovery: lessons from the past. Clin Microbiol Infect. 2014;20(3):189-90.
Drancourt M. Looking in amoebae as a source of mycobacteria. Microb Pathog. 2014;77:119-24.
Drancourt M. Multiplex testing of diarrhoea breaks down microbial barriers. Lancet Infect Dis. 2014
Aug;14(8):663-4.
Drissi F, Merhej V, Angelakis E, El Kaoutari A, Carrière F, Henrissat B, Raoult D. Comparative
genomics analysis of Lactobacillus species associated with weight gain or weight protection. Nutr
Diabetes. 2014 Feb 24;4:e109.
Dubourg G, Abat C, Rolain JM, Raoult D. Correlation between sputum and bronchoalveolar lavage
fluid cultures. J Clin Microbiol. 2015 Mar;53(3):994-6.
Dubourg G, Lagier JC, Robert C, Armougom F, Hugon P, Metidji S, Dione N, Dangui NP, Pfleiderer A,
Abrahao J, Musso D, Papazian L, Brouqui P, Bibi F, Yasir M, Vialettes B, Raoult D. Culturomics and
pyrosequencing evidence of the reduction in gut microbiota diversity in patients with broad-spectrum
antibiotics. Int J Antimicrob Agents. 2014 Aug;44(2):117-24.
Dubourg G, Colson P, Tamalet C, Fournier PE, Raoult D. Increase in sexually transmitted infections
during Europride 2013 in Marseille, France. Lancet Infect Dis. 2014 Aug;14(8):677-8.
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Dubourg G, Socolovschi C, Del Giudice P, Fournier PE, Raoult D. Scalp eschar and neck
lymphadenopathy after tick bite: an emerging syndrome with multiple causes. Eur J Clin Microbiol
Infect Dis. 2014 Aug;33(8):1449-56.
Dupouey J, Faucher B, Edouard S, Richet H, de Broucker CA, Marié JL, Kodjo A, Davoust B.
Epidemiological investigation of a human leptospirosis case reported in a suburban area near Marseille.
New Microbes New Infect. 2014 May;2(3):82-3.
Dupouey J, Faucher B, Edouard S, Richet H, Kodjo A, Drancourt M, Davoust B. Human
leptospirosis: an emerging risk in Europe? Comp Immunol Microbiol Infect Dis. 2014 Mar;37(2):77-83.
Edouard S, Mahamat A, Demar M, Abboud P, Djossou F, Raoult D. Comparison between emerging Q
fever in French Guiana and endemic Q fever in Marseille, France. Am J Trop Med Hyg. 2014
May;90(5):915-9.
Edouard S, Bibi F, Dhamodharan R, Lagier JC, Azhar EI, Robert C, Caputo A, Yasir M, Jiman-Fatani
AA, Alawi M, Fournier PE, Raoult D. Non-contiguous finished genome sequence and description of
Corynebacterium jeddahense sp. nov. Stand Genomic Sci. 2014 Apr 29;9(3):987-1002.
Edouard S, Sankar S, Dangui NP, Lagier JC, Michelle C, Raoult D, Fournier PE. Genome sequence
and description of Nesterenkonia massiliensis sp. nov. strain NP1(T.). Stand Genomic Sci. 2014 Apr
1;9(3):866-82.
Edouard S, Michel-Lepage A, Raoult D. Does it make sense to detect Streptococcus pyogenes during
tonsillitis in Europe to prevent acute rheumatic fever? Clin Microbiol Infect. 2014 Dec;20(12):O981-2.
Ehehalt U, Schunk M, Jensenius M, van Genderen PJ, Gkrania-Klotsas E, Chappuis F, Schlagenhauf P,
Castelli F, Lopez-Velez R, Parola P, Burchard GD, Cramer JP. Leishmaniasis acquired by travellers to
endemic regions in Europe: a EuroTravNet multi-centre study. Travel Med Infect Dis. 2014 MarApr;12(2):167-72.
El Houmami N, Dubourg G, Minodier P, Verschuur A, Bouvier C, Jouve JL, Raoult D, Fournier PE.
Kingella kingae DNA in langerhans cell histiocytosis of bone. Pediatr Infect Dis J. 2015 Mar;34(3):3178
El Kaoutari A, Armougom F, Raoult D, Henrissat B. [Gut microbiota and digestion of
polysaccharides]. Med Sci (Paris). 2014 Mar;30(3):259-65.
Elbir H, Abi-Rached L, Pontarotti P, Yoosuf N, Drancourt M. African relapsing Fever borreliae
genomospecies revealed by comparative genomics. Front Public Health. 2014 May 14;2:43.
Eldin C, Mahamat A, Demar M, Abboud P, Djossou F, Raoult D. Q fever in French Guiana. Am J Trop
Med Hyg. 2014 Oct;91(4):771-6
Fancello L, Monteil S, Popgeorgiev N, Rivet R, Gouriet F, Fournier PE, Raoult D, Desnues C. Viral
communities associated with human pericardial fluids in idiopathic pericarditis. PLoS One. 2014 Apr
1;9(4):e93367.
Fenollar F, Lagier JC, Raoult D. Tropheryma whipplei and Whipple's disease. J Infect. 2014
Aug;69(2):103-12.
Fenollar F, Perreal C, Raoult D. Tropheryma whipplei natural resistance to trimethoprim and
sulphonamides in vitro. Int J Antimicrob Agents. 2014 Apr;43(4):388-90.
Fotso Fotso A, Mediannikov O, Padmanabhan R, Robert C, Fournier PE, Raoult D, Drancourt M.
Genome Sequence of Borrelia crocidurae Strain 03-02, a Clinical Isolate from Senegal. Genome
Announc. 2014 Nov 6;2(6). pii: e01150-14.
Fotso Fotso A, Mediannikov O, Diatta G, Almeras L, Flaudrops C, Parola P, Drancourt M. MALDITOF mass spectrometry detection of pathogens in vectors: the Borrelia crocidurae/Ornithodoros sonrai
paradigm. PLoS Negl Trop Dis. 2014 Jul 24;8(7):e2984.
Fournier PE, Levy PY, Million M, Croce O, Blanc-Tailleur C, Brouqui P, Raoult D. Genome of a
chronic osteitis-causing Clostridium tetani. New Microbes New Infect. 2014 Jan;2(1):25-6.
Fritz S, Cassir N, Noudel R, De La Rosa S, Roche PH, Drancourt M. Postsurgical Pantoea calida
meningitis: a case report. J Med Case Rep. 2014 Jun 16;8:195.
Gaia M, Benamar S, Boughalmi M, Pagnier I, Croce O, Colson P, Raoult D, La Scola B. Zamilon, a
novel virophage with Mimiviridae host specificity. PLoS One. 2014 Apr 18;9(4):e94923.
Gautret P, Benkouiten S, Parola P, Brouqui P, Memish Z, Raoult D. Occurrence of Tropheryma
whipplei during diarrhea in Hajj pilgrims: a PCR analysis of paired rectal swabs. Travel Med Infect Dis.
2014 Sep-Oct;12(5):481-4.
Gautret P, Lagier JC, Benkouiten S, Fenollar F, Raoult D, Brouqui P. Does Tropheryma whipplei
contribute to travelers' diarrhea?: A PCR analysis of paired stool samples in French travelers to
Senegal. Travel Med Infect Dis. 2014 May-Jun;12(3):264-7.
Gautret P, Blanton J, Dacheux L, Ribadeau-Dumas F, Brouqui P, Parola P, Esposito DH, Bourhy H.
Rabies in nonhuman primates and potential for transmission to humans: a literature review and
examination of selected French national data. PLoS Negl Trop Dis. 2014 May 15;8(5):e2863.
Gautret P, Parola P. Rabies in travelers. Curr Infect Dis Rep. 2014 Mar;16(3):394.
Gautret P, Carrara P, Parola P. Long incubation in imported human rabies. Ann Neurol. 2014
Feb;75(2):324-5.
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100.
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108.
109.
110.
111.
112.
113.
114.
115.
116.
117.
118.
119.
120.
121.
Ghodbane R, Mba Medie F, Lepidi H, Nappez C, Drancourt M. Long-term survival of tuberculosis
complex mycobacteria in soil. Microbiology. 2014 Mar;160(Pt3):496-501.
Ghodbane R, Raoult D, Drancourt M. Dramatic reduction of culture time of Mycobacterium
tuberculosis. Sci Rep. 2014 Feb 28;4:4236.
Gouba N, Raoult D, Drancourt M. Gut microeukaryotes during anorexia nervosa: a case report. BMC
Res Notes. 2014 Jan 13;7:33.
Gouba N, Raoult D, Drancourt M. Eukaryote culturomics of the gut reveals new species. PLoS One.
2014 Sep 11;9(9):e106994.
Grob A, Thuny F, Villacampa C, Flavian A, Gaubert JY, Raoult D, Casalta JP, Habib G, Moulin G,
Jacquier A. Cardiac multidetector computed tomography in infective endocarditis: a pictorial essay.
Insights Imaging. 2014 Oct;5(5):559-70.
Guervilly C, Dizier S, Thomas G, Jaussaud N, Morera P, Hraiech S, Klazen F, Forel JM, Adda M, Roch
A, Collart F, Papazian L. Comparison of femorofemoral and femorojugular configurations during
venovenous extracorporeal membrane oxygenation for severe ARDS. Intensive Care Med. 2014
Oct;40(10):1598-9.
Gupta SK, Rolain JM. Reply to "Comparison of the web tools ARG-ANNOT and ResFinder for detection
of resistance genes in bacteria". Antimicrob Agents Chemother. 2014 Aug;58(8):4987.
Hai VV, Almeras L, Socolovschi C, Raoult D, Parola P, Pagès F. Monitoring human tick-borne
disease risk and tick bite exposure in Europe: available tools and promising future methods. Ticks Tick
Borne Dis. 2014 Oct;5(6):607-19.
Hamad I, Keita MB, Peeters M, Delaporte E, Raoult D, Bittar F. Pathogenic eukaryotes in gut
microbiota of western lowland gorillas as revealed by molecular survey. Sci Rep. 2014 Sep 18;4:6417.
Hamad I, Delaporte E, Raoult D, Bittar F. Detection of termites and other insects consumed by
African great apes using molecular fecal analysis. Sci Rep. 2014 Mar 27;4:4478.
Hassani II, Robert C, Michelle C, Raoult D, Hacène H, Desnues C. Non-contiguous finished genome
sequence and description of Halopiger djelfamassiliensis sp. nov. Stand Genomic Sci. 2013 Oct
5;9(1):160-74.
Hraiech S, Hiblot J, Lafleur J, Lepidi H, Papazian L, Rolain JM, Raoult D, Elias M, Silby MW,
Bzdrenga J, Bregeon F, Chabriere E. Inhaled lactonase reduces Pseudomonas aeruginosa quorum
sensing and mortality in rat pneumonia. PLoS One. 2014 Oct 28;9(10):e107125.
Jachiet PA, Colson P, Lopez P, Bapteste E. Extensive gene remodeling in the viral world: new
evidence for nongradual evolution in the mobilome network. Genome Biol Evol. 2014 Aug
7;6(9):2195-205.
Jacquier A, Kallifatidis A, Guibert N, Giorgi R, Falque C, Thuny F, Croisille P, Clarysse P, Maurel B,
Flavian A, Gaubert JY, Moulin G, Habib G. Assessment of myocardial partition coefficient of gadolinium
(λ) in dilated cardiomyopathy and its impact on segmental and global systolic function. J Magn Reson
Imaging. 2014 Dec;40(6):1336-41.
Ka MB, Gondois-Rey F, Capo C, Textoris J, Million M, Raoult D, Olive D, Mege JL. Imbalance of
circulating monocyte subsets and PD-1 dysregulation in Q fever endocarditis: the role of IL-10 in PD-1
modulation. PLoS One. 2014 Sep 11;9(9):e107533.
Keita MB, Padhmananabhan R, Caputo A, Robert C, Delaporte E, Raoult D, Fournier PE, Bittar F.
Non-contiguous finished genome sequence and description of Paenibacillus gorillae sp. nov. Stand
Genomic Sci. 2014 Mar 15;9(3):1031-45.
Keita MB, Padhmanabhan R, Caputo A, Robert C, Delaporte E, Raoult D, Fournier PE, Bittar F.
Non-contiguous finished genome sequence and description of Gorillibacterium massiliense gen. nov,
sp. nov., a new member of the family Paenibacillaceae. Stand Genomic Sci. 2014 Mar 15;9(3):807-20.
Keita MB, Hamad I, Bittar F. Looking in apes as a source of human pathogens. Microb Pathog. 2014
Dec;77:149-54.
Kernif T, Leulmi H, Socolovschi C, Berenger JM, Lepidi H, Bitam I, Rolain JM, Raoult D, Parola P.
Acquisition and excretion of Bartonella quintana by the cat flea, Ctenocephalides felis felis. Mol Ecol.
2014 Mar;23(5):1204-12.
Khelaifia S, Garibal M, Robert C, Raoult D, Drancourt M. Draft Genome Sequence of a HumanAssociated Isolate of Methanobrevibacter arboriphilicus, the Lowest-G+C-Content Archaeon. Genome
Announc. 2014 Jan 23;2(1).
Khelaifia S, Garibal M, Robert C, Raoult D, Drancourt M. Draft Genome Sequencing of
Methanobrevibacter oralis Strain JMR01, Isolated from the Human Intestinal Microbiota. Genome
Announc. 2014 Feb 20;2(1).
Kumsa B, Parola P, Raoult D, Socolovschi C. Molecular detection of Rickettsia felis and Bartonella
henselae in dog and cat fleas in Central Oromia, Ethiopia. Am J Trop Med Hyg. 2014 Mar;90(3):457-62
La Scola B, Khelaifia S, Lagier JC, Raoult D. Aerobic culture of anaerobic bacteria using
antioxidants: a preliminary report. Eur J Clin Microbiol Infect Dis. 2014 Oct;33(10):1781-3.
La Scola B. Looking at protists as a source of pathogenic viruses. Microb Pathog. 2014 Dec;77:131-5.
Lagarde S, Lagier JC, Charrel R, Quérat G, Vanhomwegen J, Desprès P, Pelletier J, Kaphan E.
Japanese encephalitis in a French traveler to Nepal. J Neurovirol. 2014 Feb;20(1):99-102.
Lagier JC, Fenollar F, Raoult D. Whipple's disease: surprised by the surprise. Lancet. 2014 Sep
27;384(9949):1184-5.
Pôle hospitalier. Maladies Infectieuses
Mise à jour : janvier 2016
9/13 122. Lagier JC. Faecal microbiota transplantation: from practice to legislation before considering
industrialization. Clin Microbiol Infect. 2014 Nov;20(11):1112-8.
123. Lagier JC, Raoult D. Immune reconstitution inflammatory syndrome associated with bacterial
infections. Expert Opin Drug Saf. 2014 Mar;13(3):341-50.
124. Lagier JC, Bibi F, Ramasamy D, Azhar EI, Robert C, Yasir M, Jiman-Fatani AA, Alshali KZ, Fournier
125.
126.
127.
128.
129.
130.
PE, Raoult D. Non contiguous-finished genome sequence and description of Clostridium jeddahense
sp. nov. Stand Genomic Sci. 2014 May 1;9(3):1003-19.
Lagier JC, Fenollar F, Chiaroni J, Picard C, Oddoze C, Abi-Rached L, Raoult D. Common subclinical
hypothyroidism during Whipple's disease. BMC Infect Dis. 2014 Jul 4;14:370.
Lagier JC, Fenollar F, Raoult D. [Whipple's disease and Tropheryma whipplei infections in internal
medicine. When to think about it? How to treat?]. Rev Med Interne. 2014;35(12):801-7.
Lamrabet O, Ghigo E, Mège JL, Lepidi H, Nappez C, Raoult D, Drancourt M. MspA-Mycobacterium
tuberculosis-transformant with reduced virulence: the "unbirthday paradigm". Microb Pathog. 2014
Nov;76:10-8.
Laudisoit A, Falay D, Amundala N, Akaibe D, de Bellocq JG, Van Houtte N, Breno M, Verheyen E,
Wilschut L, Parola P, Raoult D, Socolovschi C. High prevalence of Rickettsia typhi and Bartonella
species in rats and fleas, Kisangani, Democratic Republic of the Congo. Am J Trop Med Hyg. 2014
Mar;90(3):463-8.
Le PT, Pontarotti P, Raoult D. Alphaproteobacteria species as a source and target of lateral sequence
transfers. Trends Microbiol. 2014 Mar;22(3):147-56.
Leulmi H, Socolovschi C, Laudisoit A, Houemenou G, Davoust B, Bitam I, Raoult D, Parola P.
Detection of Rickettsia felis, Rickettsia typhi, Bartonella Species and Yersinia pestis in Fleas
(Siphonaptera) from Africa. PLoS Negl Trop Dis. 2014 Oct 9;8(10):e3152.
131. Levy PY, Drancourt M. Response to letter. J Travel Med. 2014 May-Jun;21(3):218.
132. Lochouarn M, Lagier JC, Raoult D, Pulcini C. A case of Whipple's disease evolving over 30 years. Med
Mal Infect. 2014 Jul;44(7):331-3.
133. Loucif L, Bendjama E, Gacemi-Kirane D, Rolain JM. Rapid identification of Streptomyces isolates by
MALDI-TOF MS. Microbiol Res. 2014 Dec;169(12):940-7.
134. Mediannikov O, Socolovschi C, Million M, Sokhna C, Bassene H, Diatta G, Fenollar F, Raoult D.
135.
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145.
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148.
Molecular identification of pathogenic bacteria in eschars from acute febrile patients, Senegal. Am J
Trop Med Hyg. 2014 Nov;91(5):1015-9.
Mediannikov O, Fenollar F. Looking in ticks for human bacterial pathogens. Microb Pathog. 2014
Dec;77:142-8.
Mediannikov O, Nguyen TT, Bell-Sakyi L, Padmanabhan R, Fournier PE, Raoult D. High quality
draft genome sequence and description of Occidentia massiliensis gen. nov., sp. nov., a new member
of the family Rickettsiaceae. Stand Genomic Sci. 2014 Dec 8;9:9.
Merhej V, Angelakis E, Socolovschi C, Raoult D. Genotyping, evolution and epidemiological findings
of Rickettsia species. Infect Genet Evol. 2014 Jul;25:122-37.
Million M, Raoult D. Reply to He et al. Clin Infect Dis. 2014 Nov 1;59(9):1347-8.
Million M, Roblot F, Carles D, D'Amato F, Protopopescu C, Carrieri MP, Raoult D. Reevaluation of the
risk of fetal death and malformation after Q Fever. Clin Infect Dis. 2014 Jul 15;59(2):256-60.
Million M, Bellevegue L, Labussiere AS, Dekel M, Ferry T, Deroche P, Socolovschi C, Cammilleri S,
Raoult D. Culture-negative prosthetic joint arthritis related to Coxiella burnetii. Am J Med. 2014
Aug;127(8):786.e7-786.e10.
Mishra AK, Dufour H, Roche PH, Lonjon M, Raoult D, Fournier PE. Molecular revolution in the
diagnosis of microbial brain abscesses. Eur J Clin Microbiol Infect Dis. 2014 Dec;33(12):2083-93.
Moal V, Gérolami R, Ferretti A, Purgus R, Devichi P, Burtey S, Colson P. Hepatitis E virus of subtype 3i
in chronically infected kidney transplant recipients in southeastern France. J Clin Microbiol. 2014
Nov;52(11):3967-72.
Moal V, Ferretti A, Devichi P, Colson P. Genome sequence of a hepatitis e virus of genotype 3e from a
chronically infected kidney transplant recipient. Genome Announc. 2014 Jan 30;2(1). pii: e01156-13.
Mottola G, Boucherit N, Trouplin V, Oury Barry A, Soubeyran P, Mege JL, Ghigo E. Tropheryma
whipplei, the agent of Whipple's disease, affects the early to late phagosome transition and survives in
a Rab5- and Rab7-positive compartment. PLoS One. 2014 Feb 24;9(2):e89367.
Muhammed Ameen S, Drancourt M. Comment on: measurements of the in vitro anti-mycobacterial
activity of ivermectin are method-dependent. J Antimicrob Chemother. 2014 Jun;69(6):1724-5.
Murillo N, Aubert J, Raoult D. Microbiota of Demodex mites from rosacea patients and controls. Microb
Pathog. 2014 Jun-Jul;71-72:37-40.
Murillo N, Mediannikov O, Aubert J, Raoult D. Bartonella quintana detection in Demodex from
erythematotelangiectatic rosacea patients. Int J Infect Dis. 2014 Dec;29:176-7. 25449254.
Nabet C, Raoult D. The hidden epidemic of Escherichia coli. Clin Microbiol Infect. 2014
Nov;20(11):O792-3.
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Mise à jour : janvier 2016
10/13 149. Olaitan AO, Diene SM, Gupta SK, Adler A, Assous MV, Rolain JM. Genome analysis of NDM-1
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153.
154.
155.
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157.
158.
159.
160.
161.
162.
163.
164.
165.
166.
167.
168.
169.
170.
171.
172.
173.
producing Morganella morganii clinical isolate. Expert Rev Anti Infect Ther. 2014 Oct;12(10):1297305.
Olaitan AO, Diene SM, Kempf M, Berrazeg M, Bakour S, Gupta SK, Thongmalayvong B, Akkhavong K,
Somphavong S, Paboriboune P, Chaisiri K, Komalamisra C, Adelowo OO, Fagade OE, Banjo OA, Oke AJ,
Adler A, Assous MV, Morand S, Raoult D, Rolain JM. Worldwide emergence of colistin resistance in
Klebsiella pneumoniae from healthy humans and patients in Lao PDR, Thailand, Israel, Nigeria and
France owing to inactivation of the PhoP/PhoQ regulator mgrB: an epidemiological and molecular
study. Int J Antimicrob Agents. 2014 Dec;44(6):500-7
Olaitan AO, Morand S, Rolain JM. Mechanisms of polymyxin resistance: acquired and intrinsic
resistance in bacteria. Front Microbiol. 2014 Nov 26;5:643
Ollivier M, Senneville E, Drancourt M, Argenson JN, Migaud H. Potential changes to French
recommendations about peri-prosthetic infections based on the international consensus meeting
(ICMPJI). Orthop Traumatol Surg Res. 2014 Oct;100(6):583-7.
Ouaïssi M, Studer AS, Mege D, Thuny F, Boiron L, Loundou A, Pirrò N, Hamed S, Frasconi C, Habib G,
Fournier PE, Collart F, Sielezneff I, Sastre B. Characteristics and natural history of patients with
colorectal cancer complicated by infectious endocarditis. Case control study of 25 patients. Anticancer
Res. 2014 Jan;34(1):349-53.
Padmanabhan R, Robert C, Fenollar F, Raoult D, Fournier PE. Draft Genome Sequence of
Necropsobacter rosorum Strain P709T. Genome Announc. 2014 Oct 9;2(5). pii: e00913-14.
Padmanabhan R, Dubourg G; Lagier JC, Nguyen TT, Couderc C, Rossi-Tamisier M, Caputo A,
Raoult D, Fournier PE. Non-contiguous finished genome sequence and description of Collinsella
massiliensis sp. nov. Stand Genomic Sci. 2014 Mar 15;9(3):1144-58.
Padmanabhan R, Dubourg G, Lagier JC, Couderc C, Michelle C, Raoult D, Fournier PE. Genome
sequence and description of Corynebacterium ihumii sp. nov. Stand Genomic Sci. 2014 Mar
15;9(3):1128-43.
Pagnier I, Croce O, Robert C, Raoult D, La Scola B. Genome Sequence of Legionella massiliensis,
Isolated from a Cooling Tower Water Sample. Genome Announc. 2014 Oct 16;2(5). pii: e01068-14.
Pagnier I, Croce O, Robert C, Raoult D, La Scola B. Non-contiguous finished genome sequence and
description of Anaerococcus provenciensis sp. nov. Stand Genomic Sci. 2014 Apr 10;9(3):1198-210.
Pagnier I, Croce O, Robert C, Raoult D, La Scola B. Non-contiguous finished genome sequence and
description of Fenollaria massiliensis gen. nov., sp. nov., a new genus of anaerobic bacterium. Stand
Genomic Sci. 2014 Feb 15;9(3):704-17.
Pagnier I, Croce O, Robert C, Raoult D, La Scola B. Genome Sequence of Legionella anisa, Isolated
from a Respiratory Sample, Using an Amoebal Coculture Procedure. Genome Announc. 2014 Feb
27;2(1). pii: e00031-14.
Pfleiderer A, Mishra AK, Lagier JC, Robert C, Caputo A, Raoult D, Fournier PE. Non-contiguous
finished genome sequence and description of Alistipes ihumii sp. nov. Stand Genomic Sci. 2014 Feb
15;9(3):1221-35.
Phelippeau M, Robert C, Croce O, Raoult D, Drancourt M. Draft Genome Sequence of
Mycobacterium neoaurum Strain DSM 44074T. Genome Announc. 2014 Jul 10;2(4). pii: e00699-14.
Phelippeau M, Delord M, Drancourt M, Brouqui P. Respiratory tract isolation of Mycobacterium
europaeum following influenza infection in an immunocompromised patient: a case report. J Med Case
Rep. 2014 Dec 25;8:463.
Psaroulaki A, Chochlakis D, Angelakis E, Ioannou I, Tselentis Y. Coxiella burnetii in wildlife and ticks
in an endemic area. Trans R Soc Trop Med Hyg. 2014 Oct;108(10):625-31.
Rafei R, Dabboussi F, Hamze M, Eveillard M, Lemarié C, Mallat H, Rolain JM, Joly-Guillou ML, Kempf
M. First report of blaNDM-1-producing Acinetobacter baumannii isolated in Lebanon from civilians
wounded during the Syrian war. Int J Infect Dis. 2014 Apr;21:21-3.
Ramasamy D, Lagier JC, Rossi-Tamisier M, Pfleiderer A, Michelle C, Couderc C, Raoult D, Fournier
PE. Genome sequence and description of Bacteroides timonensis sp. nov. Stand Genomic Sci. 2014
Mar 15;9(3):1181-97.
Ramasamy D, Dubourg G, Robert C, Caputo A, Papazian L, Raoult D, Fournier PE. Non
contiguous-finished genome sequence and description of Enorma timonensis sp. nov. Stand Genomic
Sci. 2014 Feb 15;9(3):970-86.
Ramasamy D, Mishra AK, Lagier JC, Padhmanabhan R, Rossi M, Sentausa E, Raoult D, Fournier PE.
A polyphasic strategy incorporating genomic data for the taxonomic description of novel bacterial
species. Int J Syst Evol Microbiol. 2014 Feb;64(Pt 2):384-91.
Raoult D. Uncultured candidatus neoehrlichia mikurensis. Clin Infect Dis. 2014 Oct;59(7):1042.
Raoult D. Faecal transplantation and infectious diseases practitioners. Clin Microbiol Infect. 2014
Nov;20(11):1097.
Raoult D, Henrissat B. Are stool samples suitable for studying the link between gut microbiota and
obesity? Eur J Epidemiol. 2014 May;29(5):307-9.
Raoult D. Editorial: emerging clones of bacterial epidemics in the genomic area. Clin Microbiol Infect.
2014 May;20(5):371-2.
Raoult D. Special section: methods in pathogen discovery. Microb Pathog. 2014 Dec;77:113.
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Mise à jour : janvier 2016
11/13 174. Rattanavong S, Fournier PE, Chu V, Frichitthavong K, Kesone P, Mayxay M, Mirabel M, Newton PN.
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185.
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192.
193.
194.
195.
196.
197.
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Bartonella henselae endocarditis in Laos - 'the unsought will go undetected'. PLoS Negl Trop Dis. 2014
Dec 11;8(12):e3385.
Rebaudet S, Mengel MA, Koivogui L, Moore S, Mutreja A, Kande Y, Yattara O, Sarr Keita V, NjanpopLafourcade BM, Fournier PE, Garnotel E, Keita S, Piarroux R. Deciphering the origin of the 2012
cholera epidemic in Guinea by integrating epidemiological and molecular analyses. PLoS Negl Trop Dis.
2014 Jun 5;8(6):e2898.
Rolain JM, Cornaglia G. Carbapenemases in Enterobacteriaceae: the magnitude of a worldwide
concern. Clin Microbiol Infect. 2014 Sep;20(9):819-20.
Rouli L, Robert C, Raoult D, Yagupsky P. Kingella kingae KK247, an Atypical Pulsed-Field Gel
Electrophoresis Clone A Strain. Genome Announc. 2014 Nov 26;2(6). pii: e01228-14.
Roux V, Robert C, Raoult D. Non-contiguous finished genome sequence of Prevotella timonensis
type strain 4401737(T.). Stand Genomic Sci. 2014 Feb 20;9(3):1344-51.
Roux V, Lagier JC, Gorlas A, Robert C, Raoult D. Non-contiguous finished genome sequence and
description of Kurthia senegalensis sp. nov. Stand Genomic Sci. 2014 Feb 20;9(3):1319-30.
Roux V, Robert C, Raoult D. Non-contiguous finished genome sequence of Corynebacterium
timonense type strain 5401744(T.). Stand Genomic Sci. 2014 Apr 25;9(3):948-55.
Roux V, Million M, Robert C, Magne A, Raoult D. Non-contiguous finished genome sequence and
description of Oceanobacillus massiliensis sp. nov. Stand Genomic Sci. 2013 Dec 15;9(2):370-84.
Safont M, Angelakis E, Richet H, Lepidi H, Fournier PE, Drancourt M, Raoult D. Bacterial
lymphadenitis at a major referral hospital in France from 2008 to 2012. J Clin Microbiol. 2014
Apr;52(4):1161-7.
Samb-Ba B, Mazenot C, Gassama-Sow A, Dubourg G, Richet H, Hugon P, Lagier JC, Raoult D,
Fenollar F. MALDI-TOF identification of the human Gut microbiome in people with and without
diarrhea in Senegal. PLoS One. 2014 May 1;9(5):e87419.
Sambou M, Faye N, Bassène H, Diatta G, Raoult D, Mediannikov O. Identification of rickettsial
pathogens in ixodid ticks in northern Senegal. Ticks Tick Borne Dis. 2014 Sep;5(5):552-6.
Sangaré AK, Boutellis A, Drali R, Socolovschi C, Barker SC, Diatta G, Rogier C, Olive MM, Doumbo OK,
Raoult D. Detection of Bartonella quintana in African body and head lice. Am J Trop Med Hyg. 2014
Aug;91(2):294-301.
Sarlon-Bartoli G, Magnan PE, Lépidi H, Bartoli MA. Celiomesenteric and renal common trunk
associated with distal thoracic aorta coarctation and three saccular aneurysms. J Vasc Surg. 2014
May;59(5):1432.
Sassi A, Loucif L, Gupta SK, Dekhil M, Chettibi H, Rolain JM. NDM-5 carbapenemase-encoding gene in
multidrug-resistant clinical isolates of Escherichia coli from Algeria. Antimicrob Agents Chemother.
2014 Sep;58(9):5606-8.
Sassi M, Gouret P, Chabrol O, Pontarotti P, Drancourt M. Mycobacteriophage-drived diversification of
Mycobacterium abscessus. Biol Direct. 2014 Sep 15;9:19.
Sassi M, Croce O, Robert C, Raoult D, Drancourt M. Draft Genome Sequence of Mycobacterium
triplex DSM 44626. Genome Announc. 2014 May 29;2(3). pii:e00499-14.
Sassi M, Drancourt M. Genome analysis reveals three genomospecies in Mycobacterium abscessus.
BMC Genomics. 2014 May 12;15:359.
Schilling S, Fusco FM, De Iaco G, Bannister B, Maltezou HC, Carson G, Gottschalk R, Brodt HR,
Brouqui P, Puro V, Ippolito G; European Network for Highly Infectious Diseases project members.
Isolation facilities for highly infectious diseases in Europe--a cross-sectional analysis in 16 countries.
PLoS One. 2014 Oct 28;9(10):e100401.
Seng P, Quenard F, Menard A, Heyries L, Stein A. Campylobacter jejuni, an uncommon cause of
splenic abscess diagnosed by 16S rRNA gene sequencing. Int J Infect Dis. 2014 Dec;29:238-40.
Seng P, Barbe M, Pinelli PO, Gouriet F, Drancourt M, Minebois A, Cellier N, Lechiche C, Asencio G,
Lavigne JP, Sotto A, Stein A. Staphylococcus caprae bone and joint infections: a re-emerging
infection? Clin Microbiol Infect. 2014 Dec;20(12):O1052-8.
Sentausa E, El Karkouri K, Michelle C, Caputo A, Raoult D, Fournier PE. Genome Sequence of
Rickettsia tamurae, a Recently Detected Human Pathogen in Japan. Genome Announc. 2014 Sep
4;2(5). pii: e00838-14.
Sentausa E, El Karkouri K, Nguyen TT, Caputo A, Raoult D, Fournier PE. Genome Sequence of
Rickettsia hoogstraalii, a Geographically Widely Distributed Tick-Associated Bacterium. Genome
Announc. 2014 Nov 6;2(6). pii: e01171-14.
Sentausa E, El Karkouri K, Michelle C, Raoult D, Fournier PE. Draft Genome Sequence of Rickettsia
aeschlimannii, Associated with Hyalomma marginatum Ticks. Genome Announc. 2014 Jul 24;2(4). pii:
e00666-14.
Sharma P, Gupta SK, Rolain JM. Whole genome sequencing of bacteria in cystic fibrosis as a model
for bacterial genome adaptation and evolution. Expert Rev Anti Infect Ther. 2014 Mar;12(3):343-55.
Sharma V, Colson P, Giorgi R, Pontarotti P, Raoult D. DNA-dependent RNA polymerase detects
hidden giant viruses in published databanks. Genome Biol Evol. 2014 Jun 13;6(7):1603-10.
Sridhar S, Brouqui P, Parola P, Gautret P. Imported cases of Middle East respiratory syndrome: an
update. Travel Med Infect Dis. 2015 Jan-Feb;13(1):106-9.
Pôle hospitalier. Maladies Infectieuses
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12/13 200. Temmam S, Davoust B, Berenger JM, Raoult D, Desnues C. Viral metagenomics on animals as a
201.
202.
203.
204.
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206.
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208.
tool for the detection of zoonoses prior to human infection? Int J Mol Sci. 2014 Jun 10;15(6):1037797.
Thiberville SD, Salez N, Benkouiten S, Badiaga S, Charrel R, Brouqui P. Respiratory viruses within
homeless shelters in Marseille, France. BMC Res Notes. 2014 Feb 5;7:81.
Thomas G, Hraiech S, Dizier S, Weiller PJ, Ene N, Serratrice J, Secq V, Ambrosi P, Drancourt M, Roch
A, Papazian L. Disseminated Mycobacterium lentiflavum responsible for hemophagocytic
lymphohistocytosis in a man with a history of heart transplantation. J Clin Microbiol. 2014
Aug;52(8):3121-3.
Thuny F, Grisoli D, Cautela J, Riberi A, Raoult D, Habib G. Infective endocarditis: prevention,
diagnosis, and management. Can J Cardiol. 2014 Sep;30(9):1046-57.
Walter G, Vernier M, Pinelli PO, Million M, Coulange M, Seng P, Stein A. Bone and joint infections
due to anaerobic bacteria: an analysis of 61 cases and review of the literature. Eur J Clin Microbiol
Infect Dis. 2014 Aug;33(8):1355-64.
Wurtz N, Grobusch MP, Raoult D. Negative impact of laws regarding biosecurity and bioterrorism on
real diseases. Clin Microbiol Infect. 2014 Jun;20(6):507-15.
Yoosuf N, Pagnier I, Fournous G, Robert C, Raoult D, La Scola B, Colson P. Draft genome
sequences of Terra1 and Terra2 viruses, new members of the family Mimiviridae isolated from soil.
Virology. 2014 Mar;452-453:125-32.
Yssouf A, Socolovschi C, Kernif T, Temmam S, Lagadec E, Tortosa P, Parola P. First molecular
detection of Rickettsia africae in ticks from the Union of the Comoros. Parasit Vectors. 2014 Sep
22;7:444.
Yssouf A, Socolovschi C, Leulmi H, Kernif T, Bitam I, Audoly G, Almeras L, Raoult D, Parola P.
Identification of flea species using MALDI-TOF/MS. Comp Immunol Microbiol Infect Dis. 2014
May;37(3):153-7.
209. Yssouf A, Parola P, Lindström A, Lilja T, L'Ambert G, Bondesson U, Berenger JM, Raoult D,
210.
Almeras L. Identification of European mosquito species by MALDI-TOF MS. Parasitol Res. 2014
Jun;113(6):2375-8.
Zammarchi L, Farese A, Trotta M, Amantini A, Raoult D, Bartoloni A. Rickettsia africae infection
complicated with painful sacral syndrome in an Italian traveller returning from Zimbabwe. Int J Infect
Dis. 2014 Dec;29:194-6.
Pôle hospitalier. Maladies Infectieuses
Mise à jour : janvier 2016
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