SPECIES CSUR NUMBER STRAIN ORGANISME ORIGIN TYPE OF

Transcription

SPECIES
Abiotrophia defectiva
Acetobacter pasteurianus Acetobacter pasteurianus
Achromobacter denitrificans
Achromobacter insolitus
Achromobacter insolitus
Achromobacter piechaudii
Achromobacter spanius
Achromobacter xylosoxidans
Achromobacter xylosoxidans
Acidaminococcus intestini
Acidaminococcus intestini
Acidaminococcus massiliensis
Acidaminococcus timonensis
Acinetobacter baumannii
CSUR NUMBER
CSURP0616
CSURP2066
CSURP2066
CSURP2856
CSURP0880
CSURP2857
CSURP1264
CSURP2943
CSURP0548
CSURP0980
CSURP1132
CSURP1668
CSURP2828
CSURP2764
CSURP0024
CSURP0025
CSURP0266
CSURP0267
CSURP0981
CSURP1573
CSURP1574
CSURP1575
CSURP1582
CSURP1587
CSURP1588
CSURP1874
CSURP1875
CSURP1876
CSURP1877
STRAIN
ORGANISME
ND
Bacteria
Bacteria
Bacteria
Bacteria
ND
Bacteria
Bacteria
Bacteria
Bacteria
12190660H
Bacteria
Bacteria
Bacteria
Ama 2
Bacteria
Marseille-P2828T
Bacteria
Marseille-P2764T
Bacteria
AYE
Bacteria
SDF
Bacteria
coliR
Bacteria
ColiS
Bacteria
Bacteria
MRB_4_Acin-bau_2012_FranceBacteria
MRB_5_Acin-bau_2010_AlgeriaBacteria
MRB_6_Acin-bau_2011_AlgeriaBacteria
MRB_13_Acin-bau_2013_LebanBacteria
MRB_18_Acin-bau_2013_LybiaBacteria
coliS
Bacteria
MRB_58_Acin-bau_2011_Alger Bacteria
ORIGIN
TYPE OF SAMPLE
Human
Feces
Human
Feces
Selles
Human
Environment
Permafrost
Human
Sputum
Environment
Permafrost
Human
Feces
Environment
Permafrost
Human
Blood
Human
Sputum
Human
Feces
Human
Feces
Duodenum
Human
Duodenum
Human
Human
Animal
Pediculus humanus
Human
Human
Human
Sputum
Acinetobacter bereziniae
Acinetobacter calcoaceticus
Acinetobacter genospecies
Acinetobacter guillouiae
Acinetobacter indicus
Acinetobacter indicus
Acinetobacter junii
Acinetobacter junii
Acinetobacter lwoffii
Acinetobacter lwoffii
CSURP1878
CSURP1879
CSURP1880
CSURP1881
CSURP1882
CSURP1883
CSURP1884
CSURP1885
CSURP1886
CSURP1887
CSURP1888
CSURP1889
CSURP1890
CSURP1891
CSURP1961
CSURP1976
CSURP2941
CSURP0270
CSURP0271
CSURP0272
CSURP1325
CSURP0904
CSURP0367
CSURP2371
CSURP2306
CSURP2306
CSURP1133
CSURP2349
CSURP0308
CSURP0786
MRB_68_Acin-bau_2013_Yeme Bacteria
MRB_69_Acin-bau_2012_AlgerBacteria
MRB_94_Acin-bau_2012_FrancBacteria
MRB_109_Acin-bau_Lybia_ND Bacteria
Bacteria
ABIsac-ColiR
Bacteria
ABIsac-ColiS
Bacteria
Liban-NDM-1
Bacteria
Bacteria
ND
Bacteria
12182433H
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
peau5
Bacteria
Bacteria
ND
Bacteria
Environment
Human
Human
Human
Permafrost
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Blood
Bone
Skin (soap)
Skin
Feces
Skin (soap)
Feces
Feces
Acinetobacter nosocomialis
Acinetobacter nosocomialis
Acinetobacter parvus
Acinetobacter pittii
Acinetobacter radioresistens
Acinetobacter schindleri
Acinetobacter septicus
Acinetobacter septicus
Acinetobacter ursingii
Acinetobacter variabilis
Acinetobacter variabilis
Acremonium kiliense
Actinobaculum massiliense
Actinobaculum schaalii
Actinobaculum schaalii
Actinomyces europaeus
Actinomyces europaeus
Actinomyces gerenseriae
Actinomyces grossensis
Actinomyces ihumii
Actinomyces johnsonii
Actinomyces johnsonii
Actinomyces massiliensis
Actinomyces meyeri
CSURP0268
CSURP0269
CSURP0848
CSURP0610
CSURP1669
CSURP1945
CSURP1006
CSURP1134
CSURP0663
CSURP1710
CSURP0772
CSURP2092
CSURP2356
CSURP2450
CSURP1982
CSURP1982
CSURP2589
CSURP0918
CSURP2803
CSURP0605
CSURP0605
CSURP1401
CSURP0242
CSURP0938
CSURP2100
CSURP2006
CSURP2016
CSURP2016
CSURP0018
CSURP1034
ColiR
Bacteria
ColiS
Bacteria
ND
Bacteria
ND
Bacteria
Ama 2
Bacteria
MRB_78_Acin-pit_2015_FranceBacteria
Bacteria
Bacteria
R2
Bacteria
ama2
Bacteria
ND
Bacteria
Bacteria
peau12
Bacteria
Fungi
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
ND
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
SD1
Bacteria
F0542
Bacteria
Bacteria
4401292 T
Bacteria
Bacteria
Human
Human
Human
Human
Human
Feces
Feces
Feces
Human
Human
Feces
Feces
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Blood
Feces
Skin (soap)
Feces
Urine
Urine
Vagina
Blood
Urine
Feces
Feces
Feces
Feces
Feces
Pharynx
Feces
Feces
Selles
Blood
Feces
Actinomyces naeslundii
Actinomyces naeslundii
Actinomyces neuii
Actinomyces neuii
Actinomyces neuii
Actinomyces neuii
Actinomyces neuii subsp. anitratus
Actinomyces odontolyticus
Actinomyces odontolyticus
Actinomyces oris
Actinomyces oris
Actinomyces oris
Actinomyces oris
Actinomyces pacaensis
Actinomyces phoceensis
Actinomyces polynesiensis
Actinomyces provencensis
Actinomyces radingae
Actinomyces radiocidentis
Actinomyces turicensis
Actinomyces turicensis
Actinomyces ureogenitalis
Actinomyces urinae
Actinomyces urogenitalis
Actinomyces viscosus
Advenella kashmirensis
Aerococcus sanginicola
Aerococcus urinae
Aerococcus urinae
Aerococcus urinae
CSURP0678
CSURP2751
CSURP0907
CSURP1762
CSURP2214
CSURP2580
CSURP2665
CSURP2379
CSURP3002
CSURP0739
CSURP1753
CSURP1759
CSURP1761
CSURP2985
CSURP1984
CSURP0658
CSURP2166
CSURP0983
CSURP1121
CSURP1128
CSURP2869
CSURP2877
CSURP2225
CSURP1180
CSURP1207
CSURP1994
CSURP1457
CSURP1729
CSURP1768
CSURP1789
ND
ND
Kwa12
vagin9
ND
OB3
KW12
Ama 2
Marseille-P2985T
MS2
SN12
FC2
KW12
Amaz1
Amaz2
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Pharynx
Feces
Feces
Vagina
Urine
Selles
Duodenum
Duodenum
Feces
Feces
Feces
Feces
Sputum
Feces
Feces
Feces
Skin
Feces
Feces
Urine
Urine
Urine
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Aerococcus viridans
Aerococcus viridans
Aerococcus viridans
Aeromicrobium massiliense
Aeromicrobium massiliense
Aeromicrobium tamlense
Aeromonas bestiarum
Aeromonas bestiarum
Aeromonas caviae
Aeromonas caviae
Aeromonas hydrophila
Aeromonas hydrophila
Aeromonas media
Aeromonas urinae
Afipia birgiae
Afipia massiliae
Aggregatibacter aphrophilus
Aggregatibacter aphrophilus
Aggregatibacter segnis
Agrococcus casei
Agrococcus massilioglaciei
Agrococcus terreus
Agromyces massiliensis
Akkermansia muciniphila
Akkermansia muciniphila
Alcaligenes faecalis
Alistipes finegoldii
Alistipes finegoldii
Alistipes ihumii
Alistipes ihumii
CSURP0751
CSURP1733
CSURP2871
CSURP0158
CSURP0711
CSURP1208
CSURP1135
CSURP1894
CSURP0636
CSURP0735
CSURP0845
CSURP2096
CSURP1136
CSURP1841
CSURP0257
CSURP0256
CSURP1062
CSURP1284
CSURP0921
CSURP2239
CSURP2731
CSURP0659
CSURP2726
CSURP1035
CSURP2261
CSURP0580
CSURP0555
CSURP1718
CSURP0204
CSURP0656
ND
Ama 2
JC14T
ND
13003672H
ND
ND
Amaz2
34632
ND
ND
Ama2
AP11
ND
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Feces
Human
Human
Feces
Human
Urine
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Blood
Human
Median abdominal scar
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Feces
Human
Environment
Permafrost
Human
Feces
Animal
Fenolar
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Alistipes ihumii
Alistipes indistinctus
Alistipes jeddahensis
Alistipes jeddahensis
Alistipes massiliensis
Alistipes obesi
Alistipes obesi
Alistipes obesihominis
Alistipes onderdonkii
Alistipes phoceensis
Alistipes provencensis
Alistipes putredinis
Alistipes senegalensis
Alistipes shahii
Alistipes shahii
Alistipes timonensis
Alistipes timonensis
Alkalibacillus almallahensis
Allisonella histaminiformans
Alloprevotella rava
Alloscardovia omnicolens
Amazonia massiliensis
Anaerococcus hydrogenalis
CSURP2998
CSURP0723
CSURP1209
CSURP2795
CSURP2263
CSURP0186
CSURP2249
CSURP2249
CSURP0591
CSURP1461
CSURP2431
CSURP1137
CSURP1675
CSURP2454
CSURP2430
CSURP0150
CSURP0808
CSURP1678
CSURP0148
CSURP0923
CSURP2421
CSURP2370
CSURP2916
CSURP1106
CSURP2559
CSURP2892
CSURP2928
CSURP3003
CSURP1110
CSURP1181
ND
PH8
T
ND
Marseille-P2431T
N6
JC50T
ND
Dielmo
JC136T
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Duodenum
Feces
Feces
Duodenum
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Halophylic feces
Feces
Duodenum
Feces
Vagin
Pharynx
Urine
Duodenum
Feces
Feces
Anaerococcus hydrogenalis
Anaerococcus jeddahense
Anaerococcus murdochii
Anaerococcus murdochii
Anaerococcus nagyae
Anaerococcus nagyae
Anaerococcus obesi
Anaerococcus octavius
Anaerococcus pacaensis
Anaerococcus prevotii
Anaerococcus prevotii
Anaerococcus provenciensis
Anaerococcus rubiinfantis
Anaerococcus rubiinfantis
Anaerococcus senegalensis
Anaerococcus tetradius
Anaerococcus urinae
Anaerococcus vaginalis
Anaerofustis stercorihominis
Anaeromassilibacillus senegalense
Anaerosalibacter bizertensis
CSURP2334
CSURP1914
CSURP1063
CSURP2216
CSURP119
CSURP119
CSURP0252
CSURP0119
CSURP0120
CSURP0719
CSURP0122
CSURP1036
CSURP2176
CSURP0121
CSURP2032
CSURP2032
CSURP0156
CSURP1064
CSURP1723
CSURP0118
CSURP0727
CSURP1688
CSURP1698
CSURP1699
CSURP2222
CSURP2835
CSURP1511
CSURP1088
CSURP1131
CSURP2177
vagin 28
SB3 T
vagin11
8405254
PH10 T
8405254
9401487
ND
9403502
9402080
MT16
JC48T
Ama 2
8404299
ND
Ama 1
Selle Fraîche
Ama 2
vagin 17
M3
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Vagina
Feces
Feces
Vagina
Osteoarticular
Feces
Feces
Osteoarticular
Blood
Feces
Blood
Feces
Vagin
Cervical abscess
Feces
Selles
Feces
Feces
Feces
Osteoarticular
Feces
Feces
Feces
Feces
Vagina
Feces
Feces
Human
Human
Feces
Feces
Anaerosalibacter massiliensis
Anaerosalibacter massiliensis
Anaerospora hongkongensis
Anaerostipes caccae
Anaerostipes caccae
Anaerotruncus colihominis
Anaerotruncus massiliensis
Aneurinibacillus aneurinilyticus
Aneurinibacillus migulanus
Aquamicrobium lusatiense
Arcanobacterium bernardiae
Arcanobacterium haemolyticum
Arthrobacter agilis
Arthrobacter albus
Arthrobacter aurescens
Arthrobacter castelli
Arthrobacter cumminsii
Arthrobacter gandavensis
Arthrobacter oxydans
Arthrobacter oxydans
Arthrobacter polychromogenes
Arthrobacter saudimassiliensis
Atopobium minutum
Atopobium parvulum
Atopobium parvulum
Atopobium vaginae
Atopobium vaginae
Atopobium vaginae
CSURP0762
CSURP1687
CSURP2374
CSURP2083
CSURP2083
CSURP0265
CSURP1084
CSURP1275
CSURP2007
CSURP0877
CSURP0802
CSURP2165
CSURP0629
CSURP1038
CSURP2254
CSURP0725
CSURP0832
CSURP0690
CSURP0603
CSURP1007
CSURP0935
CSURP2582
CSURP0805
CSURP1223
CSURP0927
CSURP1138
CSURP2895
CSURP1104
CSURP3023
CSURP2682
ND-1
KW 6
10096848H
ND
ND
ND
ND
ND
ND
ND
ND
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Selles
Human
Blood
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Selles
Human
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Skin
Human
Feces
Human
Feces
Human
Urine
Human
Feces
Environment mples; Makkah, Saudi A
Human
Feces
Human
Feces
Human
Pharynx
Human
Feces
Human
Urine
Vagin
Human
Aureimonas altamirensis
Azospirillum massiliensis
Babela massiliensis
Bacillus altitudinis
Bacillus amyloliquefaciens
Bacillus amyloliquefaciens
Bacillus andreraoultii
Bacillus aquimaris
Bacillus aquimaris
Bacillus aquimaris
Bacillus aquimaris
Bacillus arsenicus
Bacillus badius
Bacillus baekryungensis
Bacillus bataviensis
Bacillus cayorensis
Bacillus cereus
Bacillus cereus
Bacillus cereus
Bacillus cereus
Bacillus cereus
Bacillus cereus
Bacillus cereus
Bacillus cereus
Bacillus cereus
Bacillus cereus
Bacillus circulans
Bacillus circulans
Bacillus circulans
Bacillus clausii
CSURP1508
CSURP0234
CSURP0554
CSURP1977
CSURP0714
CSURP1697
CSURP1162
CSURP1235
CSURP1240
CSURP2302
CSURP2302
CSURP0755
CSURP0835
CSURP1526
CSURP1139
CSURP2727
CSURP0317
CSURP0754
CSURP1546
CSURP1547
CSURP1558
CSURP1645
CSURP1648
CSURP1653
CSURP0329
CSURP2351
CSURP0655
CSURP1730
CSURP1738
CSURP0590
859
BaBL1
ND
Ama 2
SIT1 T
ND
ND
12179325H
ND
KW1
ana 2
ana 1
Ama 2
OB3
Ama 2
peau7
ND
Ama 2
SAN1
ND
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Environment
Animal
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Animal
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Amoeba
Feces
Feces
Feces
Feces
Feces
Feces
Skin (soap)
Skin
Feces
Feces
Feces
Feces
Fenolar
Blood
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Skin (soap)
Feces
Feces
Feces
Spittle
Bacillus clausii
Bacillus clausii
Bacillus coagulans
Bacillus cohnii
Bacillus dielmoensis
Bacillus endophyticus
Bacillus endophyticus
Bacillus firmus
Bacillus firmus
Bacillus flexus
Bacillus flexus
Bacillus flexus
Bacillus flexus
Bacillus flexus
Bacillus flexus
Bacillus foraminis (à confirmer)
Bacillus fordii
Bacillus galactosidilyticus
Bacillus gibsonii
Bacillus halodurans
Bacillus halotolerans
Bacillus humi
Bacillus idriensis
Bacillus idriensis
Bacillus infantis
Bacillus infantis
Bacillus infantis
Bacillus jeddahensis
Bacillus jeddahtimonensis
Bacillus jeotgali
CSURP0675
CSURP2235
CSURP1163
CSURP0873
CSURP3026
CSURP1236
CSURP1265
CSURP0654
CSURP1731
CSURP0670
CSURP1732
CSURP1736
CSURP1737
CSURP2358
CSURP2412
CSURP2304
CSURP0633
CSURP1008
CSURP0710
CSURP1087
CSURP0932
CSURP0652
CSURP0783
CSURP2855
CSURP0676
CSURP1366
CSURP2344
CSURP0732
CSURP0977
CSURP1253
ND
ND
FF4
ND
Ama 2
Ama 2
KW12
Ama 2
peau14
ND
ND
Bac-H
ND
ND
ND
peau1
JCE T
B-jedd T
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Feces
Skin (soap)
Feces
Skin (soap)
Feces
Feces
Feces
Human
Feces
Unknown
Unknown
Human
Feces
Environment
Permafrost
Human
Feces
Human
Feces
Human
Skin (soap)
Human
Feces
Human
Feces
Human
Feces
Bacillus kyonggiensis
Bacillus lentus
Bacillus licheniformis
Bacillus marisflavi
Bacillus massilioalgeriensis
Bacillus massilioamazoniensis
Bacillus massilioamazoniensis
Bacillus massilioanorexius
Bacillus massilioanorexius
Bacillus massilioglaciei
Bacillus massiliogorillae
Bacillus massilionigeriensis
Bacillus massiliosenegalensis
Bacillus mediteraneensis
Bacillus mediterraneensis
Bacillus megaterium
Bacillus megaterium
Bacillus methylotrophicus
Bacillus mojavensis
Bacillus mycoides
Bacillus ndiopicus
Bacillus nealsonii
Bacillus niabensis
Bacillus niabensis
Bacillus niabensis
CSURP1140
CSURP1241
CSURP0773
CSURP1682
CSURP1763
CSURP1767
CSURP1788
CSURP2922
CSURP0574
CSURP0857
CSURP1359
CSURP1359
CSURP0201
CSURP0785
CSURP2600
CSURP0206
CSURP2366
CSURP0151
CSURP2384
CSURP2384
CSURP0688
CSURP2736
CSURP2647
CSURP1524
CSURP1009
CSURP3025
CSURP2085
CSURP2022
CSURP2022
CSURP2031
ND
Ama 2
OB3
Amaz2
KWA12
ND
S927 / EB01
AP8
ND
G2
Marseille-P2366T
JC6T
Marseille-P2384T
ND
FF3
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Feces
Human
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Urine
Human
Feces
Environment aline lake sediments in A
Human
Feces
Human
Selles
Human
Feces
Human
Feces
Environment
Permafrost
Human
Feces
Feces
Human
Human
Feces
Human
Selles
Feces
Human
Human
Feces
Environment
Permafrost
Human
Selles
Human
Feces
Human
Feces
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Bacillus niabensis
Bacillus niabensis
Bacillus niacini
Bacillus niameyensis
Bacillus numidis
Bacillus oleronius
Bacillus oshimensis
Bacillus phoceensis
Bacillus pichinotyi
Bacillus pocheonensis
Bacillus pumilus
Bacillus pumilus
Bacillus pumilus
Bacillus pumilus
Bacillus rubiinfantis
Bacillus salisiense
Bacillus seralis
Bacillus seralis
Bacillus simplex
Bacillus simplex
Bacillus siralis
Bacillus siralis
Bacillus soli
Bacillus sonorensis
Bacillus subterraneus
Bacillus subtilis
Bacillus subtilis
Bacillus subtilis
CSURP2031
CSURP2413
CSURP2360
CSURP1266
CSURP1438
CSURP1189
CSURP0794
CSURP2184
CSURP2639
CSURP0581
CSURP0505
CSURP1010
CSURP1534
CSURP1559
CSURP1141
CSURP1478
CSURP1786
CSURP1787
CSURP0558
CSURP2675
CSURP0780
CSURP0780
CSURP2488
CSURP0939
CSURP1270
CSURP2135
CSURP2457
CSURP1764
CSURP1765
CSURP1766
peau16
SIT3
BO
12188984H
polynesie 2
amazoniae 2
KWA2
KWA2
ND
Kw14
KW12
OB3
KW4
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Environment
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Skin (soap)
Feces
Feces
Feces
Feces
Feces
Selles
Feces
Blood
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Permafrost
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Bacillus subtilis
Bacillus subtilis
Bacillus subtilis
Bacillus subtilis
Bacillus testis
Bacillus thermoamylovorans
Bacillus thuringiensis
Bacillus touregensis
Bacillus valismortis
Bacillus vallismortis
Bacillus vietnamensis
Bacillus weihenstephanensis
Bacteroides caccae
Bacteroides caccae
Bacteroides caccae
Bacteroides caccae
Bacteroides caccae
Bacteroides caccae
Bacteroides cellulosilyticus
Bacteroides coagulans
Bacteroides finegoldii
Bacteroides fragilis
Bacteroides fragilis
Bacteroides graminisolvens
Bacteroides heparinolyticus
Bacteroides intestinalis
CSURP1770
CSURP1784
CSURP1785
CSURP0291
CSURP1492
CSURP0776
CSURP1771
CSURP1783
CSURP2237
CSURP0820
CSURP2489
CSURP2348
CSURP0984
CSURP0799
CSURP0696
CSURP0703
CSURP1724
CSURP1725
CSURP1739
CSURP1740
CSURP1741
CSURP1931
CSURP2562
CSURP2615
CSURP0444
CSURP0863
CSURP1196
CSURP1065
CSURP0836
CSURP1690
Amaz1
amaz2
Kwa2
mammouth1
SIT10
ND
Amaz2
ND
Marseille-P2489T
peau4
BV-02
ND
ND
N6
KW6
OB3
KW5
Ama 2
12222058H
ND
ND
KW4
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Animal
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Skin (soap)
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Vagin
Selles
Blood
Feces
Feces
Feces
Feces
Feces
Bacteroides licheniformis
Bacteroides massiliensis
Bacteroides mediterraneense
Bacteroides natalis
Bacteroides neonati
Bacteroides nordii
Bacteroides ovatus
Bacteroides ovatus
Bacteroides pyogenes
Bacteroides salyersiae
Bacteroides stercoris
Bacteroides thetaiotaomicron
Bacteroides timonensis
Bacteroides uniformis
Bacteroides vulgatus
Bacteroides xylanolyticus
Bariatricus massiliensis
Barnesiella intestinihominis
CSURP1691
CSURP1701
CSURP1702
CSURP1671
CSURP1495
CSURP2644
CSURP1039
CSURP1500
CSURP1040
CSURP1011
CSURP1676
CSURP1105
CSURP1498
CSURP1142
CSURP0575
CSURP0766
CSURP1679
CSURP0194
CSURP0763
CSURP1689
CSURP1709
CSURP2248
CSURP2859
CSURP0866
CSURP2616
CSURP2860
CSURP2455
CSURP2179
CSURP0886
CSURP1700
KW12
Ama 2
KW6
Ama 2
Marseille-P2644T
NEC1412B3
KW6
12199230H
ND
Ama 2
AP1
ND
Ama 2
ama2
ND
AT12 T
ND
ob 6
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Feces
Duodenum
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Blood
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Urine
Feces
Selles
Urine
Feces
Feces
Feces
Feces
Bartonella alsatica
CSURP2217
CSURB004
vagin12
Bartonella australis
Bartonella bacilliformis
Bartonella birtlesii
Bartonella bovis
Bartonella bovis
Bartonella bovis
Bartonella bovis
Bartonella bovis
Bartonella bovis
Bartonella bovis
Bartonella bovis
Bartonella bovis
Bartonella bovis
Bartonella bovis
Bartonella bovis
Bartonella bovis
Bartonella bovis
Bartonella bovis
Bartonella bovis
CSURB001
CSURB002
CSURB003
CSURB440
CSURB444
CSURB608
CSURB633
CSURB005
CSURB639
CSURB640
CSURB641
CSURB642
CSURB006
CSURB446
CSURB447
CSURB448
CSURB449
CSURB620
CSURB621
CSURB622
CSURB622
CSURB623
CSURB624
CSURB625
CSURB626
CSURB627
CSURB628
CSURB629
AUST/NH2 T
AUST/NH2
AUST/NH3
AUST/NH6
AUST/NH19
AUST/NH4
IBS 382
IBS 325
69H12
69E4
69E7
69E11
T
T
91-4 T
BVG20
BVG31
BVG22
BVG33
BVG18
BVG9-1
BVG19
BVG9-2
BVG34-2
BVG28
BVG10
BVG29
BVG7
BVG25
BVG26
Bacteria
Bacteria
Human
Human
Vagina
Blood
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Blood
Blood
Blood
Human
Blood
Human
Blood
Human
Blood
Human
Blood
Bartonella bovis
Bartonella bovis
Bartonella bovis
Bartonella cambodiensis
Bartonella capreoli
CSURB630
CSURB631
CSURB632
CSURP2059
CSURB021
BVG2
BVG23
BVG5
C635
Bartonella chomelii
CSURB022
A828
Bartonella clarridgeiae
CSURB023
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Blood
Bacteria
Human
Blood
Bacteria
Human
Blood
Bacteria
Animal
Rattus leucopus Blood
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Blood
Dakar hospital
Dakar hospital
Dakar hospital
Dakar hospital
Dakar hospital
Blood
Bacteria
Human
Blood
Bacteria
Houston-1
URBHLLY8
Bacteria
8534 chat 101
Bacteria
9535 chat 102
Bacteria
bart0030 thailandivca (1130016Bacteria
29
Bacteria
T
Bacteria
C-29
008
Bacteria
L103
Bacteria
094
Bacteria
AUST/NH10
Bacteria
AUST/NH14
Bacteria
AUST/NH18
Bacteria
Human
Human
Blood
Lymph node
Human
Animal
Blood
tomys erythroleucus (Bl
Animal
Animal
Animal
Animal
tomys erythroleucus (Bl
Rattus leucopus Blood
Rattus cornuatus Blood
Melomys sp. Blood
IBS 193
73
T
T
T
T
Bartonella coopersplainsensis
CSURB449
AUST/NH20
Bartonella doshiae
Bartonella drometari
Bartonella elizabethae
CSURB050
CSURP2718
CSURP2719
CSURP2720
CSURP2721
CSURP2722
CSURB051
R18 T
TA-3
TA-2
type strain 24C
TA-4
TA-5
Bartonella grahamii
CSURB052
V2
Bartonella henselae
Bartonella henselae
Bartonella henselae
Bartonella henselae
Bartonella henselae
Bartonella henselae
Bartonella koehlerae
Bartonella mastomydis
Bartonella musii
Bartonella raoultii
Bartonella rattiaustraliani
CSURB053
CSURB054
CSURB635
CSURB636
CSURB637
CSURB638
CSURB131
CSURB643
CSURP2060
CSURB645
CSURB611
CSURB612
CSURB613
F9251
T
T
T
Bartonella saheliensis
Bartonella schoenbuchensis
CSURB644
CSURB560
077A
Bartonella subsp. arupensis
CSURB603
94-513
Bartonella subsp. berkhoffii
CSURB602
93-C01
R1
Bacteria
Bacteria
Animal
Human
billiscus gambianus (Blo
Blood
T
Bacteria
Human
Blood
T
Bacteria
Human
Blood
Bacteria
Human
Blood
Bacteria
Human
Blood
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Spleen
Blood
Feces
Feces
Feces
Feces
Feces
Feces
Vagin
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Selles
Feces
Feces
Feces
Feces
Feces
Feces
T
T
Bartonella taylorii
CSURB577
M6
Bartonella tribocorum
CSURB578
IBS 506
Bartonella vinsonii subsp. Vinsonii
Bartonella weissi
Beduini massiliensis
Bergeyella zoohelcum
Bhargavaea cecembensis
Bhargavaea cecembensis
Bifidobacterium adolescentis
Bifidobacterium animalis
Bifidobacterium animalis
Bifidobacterium bifidum
Bifidobacterium breve
Bifidobacterium catenulatum
Bifidobacterium dentium
Bifidobacterium dentium
Bifidobacterium longum
Bifidobacterium pseudocatenulatum
Bifidobacterium saeculare
Bifidobacterium scardovii
Bilophila wadsworthia
Bittarella massiliensis
Blastococcus aggregatus
CSURB601
CSURB604
CSURP1440
CSURP1285
CSURP1238
CSURP1331
CSURP0830
CSURP0916
CSURP2247
CSURP1194
CSURP1066
CSURP1195
CSURP1900
CSURP0306
CSURP0307
CSURP0838
CSURP2587
CSURP1182
CSURP2228
CSURP0985
CSURP2442
CSURP2149
CSURP0196
Baker T
URBWM134
ND
ND
ND
GD6
T
Blastococcus massiliensis
Blautia coccoides
Blautia hydrogenotrophica
Blautia massiliensis
Blautia timonensis
Bordetella bronchiseptica
Bordetella holmesii
Bordetella pertussis
Bordetella trematum
Borrelia crocidurae
Borrelia recurrentis
Bosea eneae
Bosea massiliensis
Bosea vestrisii
Brachybacterium massiliense
Brachybacterium muris
Brevibacillus agri
Brevibacillus borstelensis
Brevibacillus brevis
Brevibacillus laterosporus
Brevibacillus massiliensis
Brevibacillus massiliensis
Brevibacillus parabrevis
Brevibacterium casei
Brevibacterium casei
Brevibacterium celere
Brevibacterium cosei
Brevibacterium ihumii
Brevibacterium luteolum
CSURP0579
CSURP1143
CSURP1144
CSURP2132
CSURP2398
CSURP2210
CSURP1356
CSURP0237
CSURP1435
CSURP0235
CSURP0002
CSURP0012
CSURP0013
CSURP0014
CSURP2240
CSURP1311
CSURP0683
CSURP0572
CSURP1041
CSURP1242
CSURP0177
CSURP0721
CSURP1467
CSURP0787
CSURP1674
CSURP0758
CSURP1665
CSURP1527
CSURP0649
CSURP1664
AP3
Marseille-P2398T
9300715
03 02
A1
34444T
63287T
34635T
ND
ND
phR
T
Kw
Ama 2
ND
Ama 1
ND
OB6
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Environment
Environment
Environment
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Duodenum
Respiratory
Feces
Nasal aspirate
Feces
Blood
Water
Water
Water
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Brevibacterium massiliense
Brevibacterium otitidis
Brevibacterium paucivorans
Brevibacterium phoceense
Brevibacterium pityocampae
Brevibacterium ravenspurgense
Brevibacterium ravenspurgense
Brevibacterium sanguinis
Brevibacterium senegalense
Brevibacterium senegalense
Brevundimonas aurantiaca
Brevundimonas diminuta
Burkholderia cenocepacia
Burkholderia cepacia
Burkholderia gladioli
Burkholderia multivorans
Butyricimonas massiliensis
Butyricimonas phoceensis
Butyricimonas timonensis
Caecumella massiliensis
Campylobacter coli
Campylobacter fetus
Campylobacter fetus
Campylobacter jejuni
Campylobacter ureolyticus
Candida albicans
CSURP1673
CSURP0878
CSURP1286
CSURP1067
CSURP2230
CSURP0817
CSURP0669
CSURP0669
CSURP1316
CSURP0155
CSURP0779
CSURP0666
CSURP0631
CSURP1400
CSURP1210
CSURP1210
CSURP1703
CSURP1704
CSURP1450
CSURP1310
CSURP0240
CSURP2478
CSURP2440
CSURP2974
CSURP1471
CSURP0236
CSURP0924
CSURP0239
CSURP1068
CSURP1523
N6
ND
MT24 T
ND
ND
JC43T
ND
ND
Fran
selle
AT9
Marseille-P2440T
Marseille-P2974T
11172895
12020068
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Fungi
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Selles
Feces
Feces
Feces
Feces
Feces
Feces
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Duodenum
Feces
Blood
Feces
Colic biopsy
Feces
Feces
Candida albicans
Candida albicans
Candida albicans
Candida dubliniensis Candida duobushaemulonis
Candida duplisiensis
Candida glabrata
Candida glabrata
Candida guillermondii
Candida guillermondii
Candida kefyr
Candida kefyr
Candida kefyr
Candida krusei
Candida lambica
Candida lusitaniae
Candida lusitaniae
Candida nivariensis
Candida norvegensis
Candida orthopsilosis
Candida parapsilosis
Candida parapsilosis
Candida tropicalis
Candida tropicalis
Candida tropicalis
Candida utilis
Candida zeylanoides
Canibacter bovis
CSURP2131
CSURP2206
CSURP2390
CSURP2124
CSURP2134
CSURP1505
CSURP1500
CSURP2171
CSURP2126
CSURP2391
CSURP1501
CSURP2128
CSURP2392
CSURP2157
CSURP2369
CSURP1503
CSURP2125
CSURP2173
CSURP2119
CSURP1504
CSURP2122
CSURP2449
CSURP1522
CSURP2107
CSURP1525
CSURP2121
CSURP2395
CSURP2106
CSURP2170
CSURP2725
Fungi
Fungi
Fungi
Fungi
Fungi
Fungi
Fungi
Fungi
Fungi
Fungi
Fungi
Fungi
Fungi
Bacteria
Fungi
Fungi
Fungi
Fungi
Fungi
Fungi
Fungi
Fungi
Fungi
Bacteria
Fungi
Fungi
Fungi
Bacteria
Fungi
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Animal
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Selles
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Selles
Feces
Feces
Feces
Selles
Feces
Fenolar
Capnocytophaga gingivalis
Capnocytophaga sputigena
Captocytophaga ochracea
Carnobacterium divergens
Carnobacterium divergens
Carnobacterium mobile
Casaltella massiliensis
Catabacter hongkongensis
Catenibacterium mitsuokai
Cedecea lapagei
Cedecea neteri
Cellulomonas denverensis
Cellulomonas flavigena
Cellulomonas hominis
Cellulomonas hominis
Cellulomonas massiliensis
Cellulomonas massiliensis
Cellulomonas parahominis
Cellulomonas spp.
Cellulomonas timonensis
Cellulosimicrobium cellulans
Cerasibacillus quisquiliarum
Chelativorans massiliensis
Christensenella minuta
Christensenella minuta
Chromohalobacter japonicus
Chryseobacterium gleum
Chryseobacterium indologenes
Chryseobacterium massiliensis
Chryseobacterium oranimense
CSURP0893
CSURP0717
CSURP2700
CSURP1243
CSURP2185
CSURP1462
CSURP0126
CSURP2084
CSURP2933
CSURP1164
CSURP1165
CSURP0986
CSURP2416
CSURP2024
CSURP2024
CSURP0627
CSURP0898
CSURP0896
CSURP0195
CSURP2058
CSURP0671
CSURP1260
CSURP2723
CSURP1999
CSURP2338
CSURP0972
CSURP1312
CSURP1349
CSURP0233
CSURP0277
ND
ND
9400853
en attente
ND
JC 225
ND
AP2
SN3
ND
CJ
216
1276256
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Animal
Human
Human
Human
Human
Human
Environment
Human
Feces
Feces
Sputum
Feces
Feces
Feces
Infected lipectomy
Feces
Duodenum
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Dakar hospital
Feces
Feces
Feces
Feces
Feces
Chryseobacterium oranimense
Chryseobacterium senegalense
Chryseobacterium taklimakanense
Chryseobacterium timonense
Citrobacter amalonaticus
Citrobacter amalonaticus
Citrobacter braakii
Citrobacter braakii
Citrobacter braakii
Citrobacter farmeri
Citrobacter fraudii
Citrobacter freundii
Citrobacter koseri
Citrobacter koseri
Citrobacter koseri
Citrobacter murliniae
Citrobacter sedlakii
Citrobacter werkmanii
Citrobacter youngae
Clostridium aerotolerans
Clostridium aldenense
Clostridium aldenense
Clostridium amazonitimonense
Clostridium amazonitimonense
Clostridium amygdalinum
Clostridium amylolyticum
Clostridium anorexicamassiliense
CSURP1585
CSURP1490
CSURP0987
CSURP2251
CSURP1107
CSURP1903
CSURP1042
CSURP1853
CSURP1857
CSURP1465
CSURP1842
CSURP0731
CSURP2486
CSURP2740
CSURP0260
CSURP0443
CSURP1117
CSURP1983
CSURP0870
CSURP0337
CSURP1012
CSURP0917
CSURP2624
CSURP308
CSURP1445
CSURP1696
CSURP2095
CSURP1145
CSURP0198
CSURP0861
MRB_16_Chry-ora_France_Hu Bacteria
FF12
Bacteria
Bacteria
Tim1 T
Bacteria
Bacteria
Bacteria
Bacteria
Amaz2
Bacteria
Amaz1
Bacteria
Bacteria
Amaz2
Bacteria
ND
Bacteria
Bacteria
Bacteria
ND
Bacteria
12220150H
Bacteria
Bacteria
Bacteria
ND
Bacteria
Bacteria
Bacteria
ND
Bacteria
Bacteria
Bacteria
Bacteria
Ama 2
Bacteria
Bacteria
Bacteria
AP5
Bacteria
ND
Bacteria
Human
Environment
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
PG01-05
Feces
Catheter
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Urine
Urine
Blood
Feces
Feces
Feces
unknown
Feces
Feces
DSM 19262
Duodenum
Feces
Feces
Feces
Feces
Feces
Feces
Clostridium baratii
Clostridium bartletii
Clostridium beijerinckii
Clostridium beijerinckii
Clostridium bifermentans
Clostridium bifermentans
Clostridium bolteae
Clostridium bolteae
Clostridium bouchedurhonense
Clostridium bouchedurhonense
Clostridium butyricum
Clostridium cadaveris
Clostridium celerecrescens
Clostridium celerecrescens
Clostridium chauvoei
Clostridium citroniae
Clostridium clostridioforme
Clostridium clostridioforme
Clostridium cochlearium
Clostridium culturomicsense
CSURP1037
CSURP0937
CSURP1183
CSURP0883
CSURP1304
CSURP0294
CSURP0628
CSURP0709
CSURP1991
CSURP2181
CSURP2181
CSURP0072
CSURP0295
CSURP0390
CSURP0607
CSURP1644
CSURP1657
CSURP2635
CSURP2636
CSURP2250
CSURP0370
CSURP1043
CSURP1146
CSURP1854
CSURP1858
CSURP1111
CSURP0928
CSURP1862
CSURP2618
CSURP1184
ND
mammouth4
ND
ND
AT4 T
DSM_2478
mammouth5
NEC8 MARSEILLE
ND
OB3
OB6
12124569-2
Amaz2
Amaz1
Rea2
Amaz2
CL6
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Animal
Human
Human
Human
Human
Human
Human
Animal
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
unknown
Feces
Preterm neonate
Feces
Feces
Feces
DSM 6566
DSM 25047
Duodenum
Blood
Feces
Feces
Feces
Feces
Feces
Feces
Feces
DSM 1285
Feces
Clostridium dakarense
Clostridium difficile
Clostridium disporicum
Clostridium disporicum
Clostridium fallax
Clostridium ghonii
Clostridium glycolicum
Clostridium hathewayi
Clostridium histolyticum
Clostridium hylemonae
Clostridium indolis
Clostridium indolis
Clostridium innocum
Clostridium innocuum
Clostridium irregulare
Clostridium jeddahense
Clostridium jeddahense
Clostridium jeddahtimonense
Clostridium lavalense
Clostridium limosum
CSURP0243
CSURP0346
CSURP0347
CSURP0740
CSURP3027
CSURP3027
CSURP3028
CSURP3029
CSURP3030
CSURP3031
CSURP2534
CSURP2626
CSURP2627
CSURP2628
CSURP0626
CSURP0846
CSURP1855
CSURP1225
CSURP2629
CSURP1990
CSURP2389
CSURP2482
CSURP2462
CSURP1126
CSURP1913
CSURP0693
CSURP1860
CSURP1230
CSURP2117
CSURP1124
FF1
CD028
VIP
ND
13162112
13162418
13084699
ESPOSITO ALAIN
BAPTISTE
ND
ND
Amaz2
JC T
OB6
CL-2
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
DSM 5521
DSM 2631
DSM 15049
Feces
Feces
Feces
Feces
DSM 2158
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Clostridium marcenay
Clostridium marcenay
Clostridium marseillense
Clostridium massilioamazoniense
Clostridium massiliodielmoense
Clostridium massiliosenegalense
Clostridium neonatale
Clostridium neonatale C25
Clostridium neonatale C25
Clostridium neonatale NEC25
Clostridium niameyense
Clostridium nigeriense
Clostridium novyi
Clostridium paraputrificum
Clostridium paraputrificum
Clostridium perfringens
Clostridium perfringens
Clostridium phoceense
Clostridium polynesiense
Clostridium propionicum
Clostridium propionicum
Clostridium ramosum
Clostridium ramosum
Clostridium rectum
Clostridium rubiinfant
Clostridium saccharolyticum
Clostridium sardiniense
CSURP1856
CSURP1859
CSURP2262
CSURP1360
CSURP2255
CSURP0299
CSURP0102
CSURP2681
CSURP2681
CSURP2677
CSURP2679
CSURP2680
CSURP1468
CSURP2414
CSURP1464
CSURP0608
CSURP2208
CSURP0813
CSURP2246
CSURP1929
CSURP0630
CSURP0919
CSURP0919
CSURP0625
CSURP1866
CSURP2634
CSURP1147
CSURP2456
CSURP1480
CSURP2620
OB3
Amaz2
ND2 T
Marseille-P2414
ND
GD3 T
MS1 T
ND
Amaz2
MT1
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Selles
Feces
Feces
ND
ND
ND
ND
ND
Feces
Feces
Feces
Feces
Feces
Feces
Vagin
Feces
Feces
Feces
Feces
Feces
Feces
DSM 1295
Feces
Feces
Feces
DSM 2632
Clostridium sartagoforme
Clostridium saudii
Clostridium schirmacherense
Clostridium schirmacherense
Clostridium scindens
Clostridium scindens
Clostridium senegalense
Clostridium senegalense
Clostridium septicum
Clostridium sordellii
Clostridium sphenoides
Clostridium sporogenes
Clostridium subterminale
Clostridium subterminale
Clostridium sulfidigenes
Clostridium sulfidigenes/subterminale
Clostridium symbiosum
Clostridium tertium
Clostridium tertium
Clostridium tertium
Clostridium tertium
Clostridium tertium
Clostridium tertium
CSURP2889
CSURP0852
CSURP0697
CSURP1912
CSURP2621
CSURP1226
CSURP2730
CSURP0152
CSURP0747
CSURP1044
CSURP0609
CSURP1543
CSURP1544
CSURP1545
CSURP2251
CSURP1932
CSURP0330
CSURP0682
CSURP2556
CSURP2275
CSURP2638
CSURP1446
CSURP2490
CSURP1865
CSURP0565
CSURP1552
CSURP1553
CSURP1554
CSURP2622
CSURP0565
ND
JCC T
DSM 5676
JC122T
ND
ND
KW1
N6
ana 2
mammouth7
ND
Amaz2
ND
KW1
KW2
N6
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Animal
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Feces
Feces
DSM 17394
Feces
DSMZ
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Vagin
Feces
Selles
Feces
Feces
Feces
Feces
Feces
Feces
Feces
DSM 2485
Feces
Clostridium tetani
Clostridium tetani
Clostridium tetani
Clostridium tetani
Clostridium thiosulfatireducens
Clostridium thiosulfatireducens
Clostridium touaregense
Clostridium touaregense
Clostridium venationis
Clostridium venationis
Collinsella aerofaciens
Collinsella ihumii
Collinsella massiliensis
Collinsella massiliensis
Collinsella massilioamazoniensis
Collinsella massilioamazoniensis
Collinsella tanakaei
Colonella massiliensis
Comamonas kerstersii
Conceptionensis arletti
Coprobacillus cateniformis
Corynebacbterium amycolatum
Corynebacterium accolens
Corynebacterium accolens
Corynebacterium afermentans
CSURP0247
CSURP0350
CSURP0589
CSURP1119
CSURP1447
CSURP2623
CSURP2415
CSURP2415
CSURP1303
CSURP2640
CSURP1069
CSURP2019
CSURP0902
CSURP1166
CSURP1227
CSURP1742
CSURP1228
CSURP1728
CSURP2427
CSURP2911
CSURP0849
CSURP0123
CSURP1263
CSURP2549
CSURP0702
CSURP1760
CSURP1287
CSURP1287
CSURP1751
CSURP1752
12124569
12124569-1
12124569H
Marseille-P2415
GD8
GD3 T
Ama 1
Ama2
Marseille-P2911T
ND
8403923
ND
Ama 2
HIV
Ama 2
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Bone biopsy
Blood
Blood
Feces
Feces
DSM 13105
Feces
Selles
Feces
Selles
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Duodenum
Duodenum
Feces
Sinusitis
Feces
Vagin
Feces
Feces
Feces
Feces
Feces
Feces
Corynebacterium amycolatum
Corynebacterium appendicis
Corynebacterium argentoratense
Corynebacterium aurimucosum
Corynebacterium auris
Corynebacterium bouchedurhonense
Corynebacterium bouchedurhonense
Corynebacterium bovis
Corynebacterium confusum
Corynebacterium coyleae
Corynebacterium coyleae
Corynebacterium diphtheriae
Corynebacterium doosanense
Corynebacterium durum
Corynebacterium efficiens
Corynebacterium freneyi
Corynebacterium genitalium
Corynebacterium glucobacterium
Corynebacterium ihumii
Corynebacterium imitans
Corynebacterium jeddahense
Corynebacterium jeikeium
Corynebacterium jeikeium
Corynebacterium karolinskerse
Corynebacterium lascolaense
CSURP1758
CSURP0385
CSURP0850
CSURP1735
CSURP2533
CSURP2759
CSURP1485
CSURP1259
CSURP0834
CSURP1368
CSURP2005
CSURP2067
CSURP1319
CSURP2491
CSURP0622
CSURP1211
CSURP1115
CSURP0298
CSURP0929
CSURP1244
CSURP0788
CSURP1267
CSURP0689
CSURP2386
CSURP1321
CSURP0778
CSURP0650
CSURP1746
CSURP1472
CSURP2174
OB 3
12182530H
ND
Ama 2
ND
12224437H
ND
ND
Marseille-P2386T
ND
ND
Amaz2
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Blood
Feces
Feces
Urine
Pharynx
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Biopsy of foot
Blood
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Corynebacterium lipophiloflavum
CSURP1272
CSURP2404
Corynebacterium lipophiloflavum
Corynebacterium macginleyi
CSURP1013
Corynebacterium massiliense
CSURP0019
Corynebacterium mastidis
CSURP1399
Corynebacterium minutissimum
CSURP1045
Corynebacterium munitissium
CSURP2361
Corynebacterium pacaense
CSURP2417
Corynebacterium phoceense
CSURP0098
Corynebacterium phoceense
CSURP1906
Corynebacterium pilbarense
CSURP1393
Corynebacterium provencense
CSURP2161
Corynebacterium pseudodiphtheriticumCSURP1070
Corynebacterium pseudogenitalium CSURP1116
Corynebacterium pyruviciproducens CSURP2252
Corynebacterium pyruviciproducens CSURP2940
Corynebacterium reamassiliensis
CSURP0903
Corynebacterium simulans
CSURP1046
Corynebacterium singulare
CSURP1937
Corynebacterium stationis
CSURP1261
Corynebacterium striatum
CSURP0642
CSURP0784
CSURP2584
Corynebacterium suicordis
CSURP1187
Corynebacterium suicordis
CSURP1187
Corynebacterium sundsvallense
CSURP1108
Corynebacterium timonense
CSURP0020
5402485T
peau17
Marseille-P2417T
MC1 T
SN15
HIV
Ama 1
Ama 2
ND
13015170H
ND
5401744T
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Blood
Feces
Articular fluid
Feces
Feces
Skin (soap)
Feces
Urine
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Urine
Feces
Feces
Feces
Feces
Blood
Feces
Urine
Feces
Feces
Feces
Blood
Corynebacterium tuberculostearicum
Corynebacterium tuscaniensis
Corynebacterium urealyticum
Corynebacterium urealyticum
Corynebacterium ureicelerivorans
Corynebacterium ureicelerivorans
Corynebacterium urinapleomorphum
Corynebacterium variabile
Coxiella burnetii
Coxiella burnetii
Coxiella burnetii
Coxiella burnetii
Coxiella burnetii
Coxiella burnetii
Coxiella burnetii
Coxiella burnetii
Coxiella burnetii
Coxiella burnetii
Coxiella burnetii
Coxiella burnetii
Coxiella burnetii
Coxiella burnetii
Coxiella burnetii
Coxiella burnetii
Coxiella burnetii
Cronobacter sakazakii
Cryptobacterium curtum
Cryptococcus diffluens
CSURP0583
CSURP0829
CSURP1755
CSURP1390
CSURP0803
CSURP1757
CSURP1281
CSURP2513
CSURP2799
CSURP0933
CSURC004
CSURC005
CSURC006
CSURC007
CSURC008
CSURC009
CSURC010
CSURC011
CSURC012
CSURC013
CSURC014
CSURC015
CSURC016
CSURC017
CSURC018
CSURC019
CSURC020
CSURP0922
CSURP2827
CSURP2447
12200980H
ND
Ama 2
ND
Marseille-P2799T
CB163
CB401
CB160C
CB144
CB173
CB171
CB169
CB168
CB162
CB167
CB166
CB165
CB164
CB175 B
CB175 A
CB174
CB172
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Fungi
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Blood
Feces
Feces
Feces
Feces
Feces
Feces
Selles
Urine
Feces
Feces
Duodenum
Feces
Cryptococcus neoformans
Cryptococcus uniguttulatus
Culturomica massiliensis
Cupriavidus filardi
Cupriavidus respiraculi
Cupriavidus respiraculi
Cytophaga massiliensis
Dakarella massiliensis
Debaryomyces hansenii
Debaryomyces hansenii
Debaryomyces sp.
Debaryomyces subglobosus
Debaryomyces subglobosus
Delftia acidovorans
Delftia tsuruhatensis
Dermabacter hominis
Dermabacter hominis
Dermabacter hominis
Dermabacter indicis
Dermacoccus barathri
Dermacoccus barathri
Dermacoccus nishinomiyaensis
Dermobacter hominis
Desnuesiella massiliensis
Desulfovibrio desulfuricans
Dialister invisus
Dialister invisus
Dialister micraerophilus
Dialister microaerophilus
Dialister microaerophilus
CSURP2258
CSURP2147
CSURP2698
CSURP2102
CSURP1197
CSURP2608
CSURP0232
CSURP1938
CSURP2163
CSURP2394
CSURP2154
CSURP2146
CSURP2393
CSURP1071
CSURP1198
CSURP0641
CSURP0743
CSURP0809
CSURP1488
CSURP0521
CSURP1521
CSURP0988
CSURP2881
CSURP1918
CSURP2296
CSURP2212
CSURP2836
CSURP1118
CSURP2331
CSURP2331
Marseille-P2698T
174
ND3
13016280H
ND
ND
FF11
MT10 T
vagin 25
Yeast fungi
Fungi
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Fungi
Fungi
Fungi
Fungi
Fungi
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Environment
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Feces
Selles
Feces
bacterio
Vagina
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Blood
Feces
Feces
Finger infection
Feces
Feces
Feces
Pharynx
Feces
Feces
Feces
Feces
Feces
Vagina
Vagina
Dialister pneumosintes
Dielma fastidiosa
Dielma fastidiosa
Dietzia cinnamea
Dietzia maris
Dietzia maris
Dietzia natronolimnaea
Dorea longicatena
Dorea massiliensis
Drancourtella massiliensis
Drancourtella timonensis
Drancourtella timonensis
Duodena massiliensis
Eggerthella lenta
Eggerthella lenta
Eggerthella lenta
Eikenella corrodens
Eisenbergiella massiliensis
Elisabethkingia meningoseptica
Elizabethkingia miricola
Elizabethkingia miricola
Emergencia timonensis
Empedobacter brevis
Enorma massiliensis
Enorma massiliensis
Enorma massiliensis
Enorma timonensis
Enorma timonensis
Enterobacter aerogenes
CSURP1188
CSURP0149
CSURP0761
CSURP1317
CSURP0679
CSURP0679
CSURP1199
CSURP2116
CSURP0199
CSURP1506
CSURP2008
CSURP2008
CSURP2968
CSURP0305
CSURP1726
CSURP2875
CSURP0701
CSURP2120
CSURP1394
CSURP0684
CSURP1528
CSURP2260
CSURP1437
CSURP0183
CSURP0253
CSURP0707
CSURP0900
CSURP0936
CSURP0210
CSURP0273
JC13T
ND
ND
AP6
AT6
Marseille-P2968T
Ama 2
ND
phI
T
ND
GD5 T
NCDC 819-56
1509E
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Selles
Duodenum
Feces
Feces
Urine
Finger abces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Enterobacter asburiae
Enterobacter cloacae
Enterobacter cloacae Marseille
Enterobacter gallinarum
Enterobacter gergoviae
Enterobacter kobei
Enterobacter kobei
Enterobacter kobei
Enterobacter ludwigii
Enterobacter massiliensis
Enterobacter phoceensis
Enterococcus asini
Enterococcus avium
Enterococcus avium
Enterococcus avium
Enterococcus avium
CSURP0989
CSURP1578
CSURP1589
CSURP1686
CSURP2878
CSURP0913
CSURP0570
CSURP0713
CSURP1944
CSURP1962
CSURP1963
CSURP2050
CSURP2676
CSURP2738
CSURP2753
CSURP2284
CSURP1586
CSURP2862
CSURP1288
CSURP0288
CSURP0844
CSURP1590
CSURP1460
CSURP0906
CSURP2403
CSURP0855
CSURP0781
CSURP1512
CSURP1513
CSURP1548
EA1509E
Bacteria
MRB_9_Ente-aer_2012_FranceBacteria
MRB_19_Ente-aer_2014_FrancBacteria
Ama 2
Bacteria
Bacteria
ND
Bacteria
12198842H
Bacteria
ND
Bacteria
MRB_77_Ente-clo_2015_Franc Bacteria
MRB_115_Ente-clo_2014_FranBacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
12177655H
Bacteria
ND
Bacteria
MRB_20_Ente-kob_2015_FrancBacteria
Bacteria
ND
Bacteria
Bacteria
ND
Bacteria
ND
Bacteria
ana1
Bacteria
ana2
Bacteria
KW2
Bacteria
Human
Urine
Human
Human
Human
Human
Human
Feces
Urine
Thorax scar Blood
Blood
Feces
Environment
Human
Human
Human
Permafrost
Urine
Pharynx
Feces
Human
Human
Human
Human
Urine
Feces
Blood
Feces
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Enterococcus avium
Enterococcus avium
Enterococcus avium
Enterococcus avium
Enterococcus avium
Enterococcus avium
Enterococcus avium
Enterococcus avium
Enterococcus avium
Enterococcus avium
Enterococcus avium
Enterococcus avium
Enterococcus avium
Enterococcus cameliflavens
Enterococcus casseliflavus
Enterococcus cecorum
Enterococcus cloacae
Enterococcus devriese
Enterococcus diestrammenae
Enterococcus dispar
Enterococcus durans
Enterococcus durans
Enterococcus durans
CSURP1549
CSURP1550
CSURP1551
CSURP1776
CSURP1777
CSURP1778
CSURP1779
CSURP1780
CSURP1791
CSURP1792
CSURP1793
CSURP2229
CSURP2872
CSURP1796
CSURP0634
CSURP1520
CSURP1538
CSURP1642
CSURP1643
CSURP1790
CSURP1072
CSURP1650
CSURP1651
CSURP1652
CSURP0112
CSURP0303
CSURP2034
CSURP0621
CSURP1774
CSURP1775
KW6
KW1
ana 2
N6
Amaz1
KWA12
KW2
Amaz1
SAN1
KWA6
Amaz2
OB3
ND
N6
KW1
KW 12
Ama 2
Amaz2
Ama 2
SAN1
OB 3
ND
KWA12
KWA4
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Urine
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Enterococcus durans
Enterococcus durans
Enterococcus durans
Enterococcus durans
Enterococcus durans
Enterococcus durans
Enterococcus eurekensis
Enterococcus eurekensis
Enterococcus faecalis
CSURP1794
CSURP1795
CSURP1797
CSURP1798
CSURP1799
CSURP1800
CSURP2018
CSURP2018
CSURP0577
CSURP0720
CSURP1515
CSURP1516
CSURP1517
CSURP1557
CSURP1579
CSURP1580
CSURP1628
CSURP1629
CSURP1630
CSURP1631
CSURP1632
CSURP1633
CSURP1634
CSURP1635
CSURP1636
CSURP1637
CSURP2041
CSURP2042
CSURP2043
CSURP2044
Amaz2
HIV
SAN1
Amaz1
marasme 9
senegal 1
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
12201251H
Bacteria
ND
Bacteria
ana1
Bacteria
ana 2
Bacteria
KW1
Bacteria
ob1
Bacteria
MRB_10_Ente-fae_2015_Franc Bacteria
MRB_11_Ente-fae_2015_Franc Bacteria
Niger 4
Bacteria
OB1
Bacteria
KW 6
Bacteria
KW 12
Bacteria
OB3
Bacteria
Ama 2
Bacteria
SAH7
Bacteria
KW5
Bacteria
NDIOP
Bacteria
Niger 6
Bacteria
8998
Bacteria
5799
Bacteria
poulet mars 5
Bacteria
poulet mars 29
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Selles
Blood
Feces
Feces
Feces
Feces
Feces
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Enterococcus faecium
Enterococcus gallinarum
Enterococcus gilvus
Enterococcus hirae
Enterococcus hirae
Enterococcus hirae
Enterococcus hirae
Enterococcus hirae
Enterococcus hirae
Enterococcus hirae
Enterococcus hirae
Enterococcus italicus
Enterococcus lenta
CSURP2282
CSURP2291
CSURP2525
CSURP0745
CSURP1624
CSURP1625
CSURP1640
CSURP1641
CSURP1815
CSURP1816
CSURP1824
CSURP1825
CSURP0364
CSURP0770
CSURP1514
CSURP1530
CSURP1531
CSURP1540
CSURP1541
CSURP0672
CSURP0544
CSURP0557
CSURP1518
CSURP1519
CSURP1536
CSURP1537
CSURP1773
CSURP1781
CSURP1924
CSURP0673
vagin1
ND
Ama 2
SAN1
Niger 6
OB6
SAN3
duo
OB6
HIV
12181002H
ND
KW5
ob1
N6
ana 1
KW1
ND
ND
ND
KW1
N6
TS
ana 2
SAN1
HIV
ND
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Vagina
Vagina
Urine
Feces
Feces
Feces
Feces
Feces
Feces
Duodenum
Feces
Feces
Blood
Feces
Feces
Feces
Feces
Feces
Feces
Feces
ND
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Enterococcus malodoratus
Enterococcus massiliensis
Enterococcus mundtii
Enterococcus mundtii
Enterococcus pallens
Enterococcus phoeniculicola
Enterococcus pseudoavium
Enterococcus raffinosus
Enterococcus sanguinicola
Enterococcus thailandicus
Enterococcus thailandicus
Enterococcus timonensis
Enterococcus villorum
Erysipelothrix rhusiopathiae
Escherichia coli
Escherichia coli
Escherichia coli
Escherichia coli
Escherichia coli
Escherichia coli
Escherichia coli
Escherichia coli
Escherichia coli
Escherichia coli
Escherichia coli
Escherichia coli
CSURP1148
CSURP1772
CSURP1782
CSURP1928
CSURP0724
CSURP2089
CSURP1309
CSURP1149
CSURP1289
CSURP0865
CSURP1542
CSURP1769
CSURP2367
CSURP1257
CSURP1902
CSURP2817
CSURP0869
CSURP1113
CSURP0216
CSURP0231
CSURP0332
CSURP0729
CSURP1555
CSURP1556
CSURP1570
CSURP1577
CSURP1661
CSURP1871
CSURP1872
CSURP1954
Bacteria
Bacteria
Amaz2
Bacteria
AT1 T
Bacteria
ND
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
ND
Bacteria
KW1
Bacteria
OB1
Bacteria
Bacteria
Bacteria
Bacteria
Marseille-P2817T
Bacteria
ND
Bacteria
Bacteria
Ec_IL_NDM_5636
Bacteria
Ec_IL_NDM_1970
Bacteria
12180527H
Bacteria
ND
Bacteria
KW1
Bacteria
N6
Bacteria
MRB_1_Esch-col_2013_LebanoBacteria
34RE2
Bacteria
OB3
Bacteria
MRB_55
Bacteria
MRB_56
Bacteria
MRB_87_Esch-col_2012_Alger Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Sputum
Feces
Feces
Human
Feces
Blood
Feces
Feces
Feces
Escherichia coli
Escherichia coli
Escherichia coli
Escherichia coli
Escherichia coli
Escherichia coli
Escherichia coli
Escherichia coli
Escherichia coli
Escherichia fergusonii
Escherichia hermannii
Escherichia vulneris
Eubacterium limosum
Eubacterium massiliense
Eubacterium massiliense
Eubacterium tenue
Eubacterium tomae
Ewingella massiliensis
Ewingella massiliensis
Exigobacterium indicum
Exiguobacterium acetylicum
Exiguobacterium aurantiacum
Exiguobacterium profundum
Exiguobacterium profundum
Facklamia hominis
Facklamia hominis
Facklamia hominis
Facklamia languida
Facklamia tabacinasalis
Fastidiosipila sanguinis
CSURP1964
CSURP1965
CSURP1966
CSURP2202
CSURP2285
CSURP2530
CSURP2701
CSURP2702
CSURP2704
CSURP0726
CSURP0990
CSURP1387
CSURP1150
CSURP1926
CSURP1927
CSURP0647
CSURP1802
CSURP0103
CSURP2511
CSURP1396
CSURP2353
CSURP0661
CSURP1290
CSURP2303
CSURP1014
CSURP2218
CSURP2150
CSURP1318
CSURP2098
CSURP2142
MRB_97_Esch-col_2014_FrancBacteria
Bacteria
vagin4
Bacteria
DSM3925
Bacteria
Bacteria
DK330
Bacteria
DK331
Bacteria
DK333
ND
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
ND
Bacteria
Amaz2
Bacteria
Bacteria
Bacteria
Marseille-P2511T
Bacteria
peau9
Bacteria
ND
Bacteria
Bacteria
Bacteria
Bacteria
vagin13
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Vagina
ND
DK330
DK331
DK333
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Vagina
Urine
Feces
Skin (soap)
Feces
Feces
Skin (soap)
Feces
Vagina
Vagin
Feces
Feces
Feces
Fenollaria massiliensis
Finegoldia magna
Finegoldia magna
Finegoldia magna
Finegoldia magna
Finegoldia magna
Flaviflexus massiliensis
Flavonifractor plautii
Fournierella massiliensis
Fusobacterium gonidiaformans
Fusobacterium mortiferum
Fusobacterium naviforme
Fusobacterium necrophorum
Fusobacterium nucleatum
Fusobacterium nucleatum
Fusobacterium varium
Gabonia massiliensis
Gardnerella vaginalis
Gardnerella vaginalis
Gemella haemolysans
Gemella morbillorum
Gemella morbillorum
Gemella sanguinis
Gemella sanguinis
Gemmata massiliana
Gemmata massiliana
CSURP2288
CSURP2070
CSURP0127
CSURP0588
CSURP2215
CSURP2342
CSURP2882
CSURP2289
CSURP1300
CSURP1167
CSURP1727
CSURP2221
CSURP2014
CSURP1186
CSURP1015
CSURP1073
CSURP1016
CSURP1151
CSURP2333
CSURP1168
CSURP1910
CSURP0680
CSURP1749
CSURP1074
CSURP0810
CSURP1801
CSURP0812
CSURP2459
CSURP0189
CSURP0193
9401234
ND
vagin10
Ama2
AM2
vagin 27
GM3 T
ND
Ama 2
ND
Amaz2
ND
IIL30 T
CIL30
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Vagina
Feces
Osteoarticular
Feces
Vagina
Vagina
Pharynx
Vagin
Feces
Feces
Feces
Vagina
Feces
Feces
Feces
Feces
Feces
Feces
Vagina
Feces
Feces
Human
Human
Human
Human
Human
Human
Environment
Environment
Feces
Feces
Feces
Feces
Feces
Feces
Hospital water
Hospital water
Georgenia muralis
Gernella bergeri
Globicatella sulfidifaciens
Gorbachella massiliensis
Gorbachella massiliensis
Gordonia paraffinivorans
Gordonia rubripertincta
Gordonia sputi
Gordonia terrae
Gordonibacter pamelaeae
Gordonibacter urolithinfaciens
Gorillibacterium massiliense
Gorillibacterium timonense
Gracilibacillus dipsauri
Gracilibacillus massiliensis
Gracilibacillus thailandensis
Granulicatella adiacens
Granulicatella elegans
Guyana massiliensis
Haematobacter massiliensis
Haemophilus influenzae
Haemophilus massiliensis
Haemophilus parainfluenzae
CSURP0596
CSURP1996
CSURP1481
CSURP2021
CSURP2281
CSURP1185
CSURP0884
CSURP2253
CSURP1109
CSURP1276
CSURP0309
CSURP0290
CSURP2011
CSURP0694
CSURP1089
CSURP1711
CSURP1441
CSURP1493
CSURP0741
CSURP0692
CSURP1169
CSURP0259
CSURP0582
CSURP1075
CSURP1670
CSURP1695
CSURP0859
CSURP0991
CSURP1685
CSURP1694
ND
GD7
DSM101082
ND
G5T
ND
Seck
Ndiop
ND
ND
12201038H
Ama 3
Ama 1
FF7 T
Ama 2
KW15
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Blood
Feces
Feces
Feces
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
ND
Human
Human
Human
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Blood
Feces
Feces
Feces
ND
Feces
Feces
Feces
Hafnia alvei
Hafnia alvei
Halobacillus dabanensis
Halobacillus karajensis
Halobacillus salinus
Halobacillus trueperi
Haloferax alexandrinus
Haloferax massiliensis
Halomonas massiliensis
Halomonas sp. Souche Saoudii
Halopiger djelfamassiliensis
Halopiger goleamassiliensis
Helcobacillus massiliensis
Helcobacillus massiliensis
Helcococcus kunzii
Helcococcus kunzii
Helicobacter criradi
Herbaspirillum massiliense
Holdemania filiformis
Holdemania massiliensis
Hugonella massiliensis
Ignavigranum ruoffiae
Ignavigrunum ruffiae
Ihuella massiliensis
Ihuella massiliensis
Inquilinus limosus
Intestinimonas butyriciproducens
Intestinimonas gabonensis
Intestinimonas massiliensis
Intestinimonas timonensis
CSURP0516
CSURP0718
CSURP0797
CSURP0796
CSURP2544
CSURP0795
CSURP0798
CSURP0974
CSURP2426
CSURP2512
CSURP3035
CSURP3036
CSURP0264
CSURP0687
CSURP0371
CSURP0889
CSURP1408
CSURP0895
CSURP2088
CSURP1374
CSURP2118
CSURP2400
CSURP1395
CSURP1486
CSURP2299
CSURP1200
CSURP1453
CSURP2072
CSURP1930
CSURP2010
12189701H
ND
HD-02
HK-03
HT-01
Arc-Hr
Arc-Hr T
Marseille-P2426T
DR2
IIH2
IIH3
ND
12182451H
ND
JC206T
AT8
GD2
GD4
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Archea
Archea
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Fungi
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Environment
Environment
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Blood
Pancreas necrosis
Feces
Feces
Halophilic feces
HT-01
Feces
Feces
Halophylic feces
Feces
Algerian Lake water
Algerian Lake water
Feces
Blood
Arthritis
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Isoptericola variabilis
Janibacter hoylei
Janibacter melonis
Jeddahella massiliensis
Jeddahella massiliensis
Jeotgalicoccus saudimassiliensis
Kallipyga gabonensis
Kallipyga massiliensis
Kerstersia gyiorum
Khelaifiabacterium massiliense
Khelaifiabacterium massiliensis
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
CSURP2305
CSURP1047
CSURP2733
CSURP1190
CSURP1911
CSURP1221
CSURP1915
CSURP0241
CSURP1916
CSURP2219
CSURP1407
CSURP1935
CSURP1935
CSURP0947
CSURP0948
CSURP0949
CSURP0950
CSURP0951
CSURP0952
CSURP0953
CSURP0954
CSURP0955
CSURP0956
CSURP0958
CSURP0959
CSURP0960
CSURP0961
CSURP0962
CSURP0963
CSURP0964
GM4 T
PH2 T
vagin14
MT13
MT13
Sch1617(3)
Sch559
Sch1693
Aa574
Ped21
Sch1667
Sch1671
G1
Sch258
Sch87
Sch429
Kk247*
R12
B9853
B10615
B9001970
Kk416
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Skin (soap)
Human
Human
Feces
Environment
Permafrost
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Vagina
Human
Feces
Feces
Human
Human
Feces
Human
Human
Human
Pharynx
Human
Pharynx
Human
Pharynx
Human
Pharynx
Human
Pharynx
Human
Pharynx
Human
Pharynx
Human
Pharynx
Human
Pharynx
Human
Pharynx
Human
Synovial fluid
Human
Synovial fluid
Human
Synovial fluid
Human
Blood
Human
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella kingae
Kingella negevensis
Klebsiella oxytoca
Klebsiella oxytoca
Klebsiella oxytoca
Klebsiella oxytoca
Klebsiella oxytoca
Klebsiella oxytoca
CSURP0965
CSURP0966
CSURP0967
CSURP0968
CSURP0969
CSURP0970
CSURP1017
CSURP2614
?
CSURP1409
CSURP1410
CSURP1411
CSURP1412
CSURP1413
CSURP1414
CSURP1415
CSURP1416
CSURP1417
CSURP1418
CSURP1419
CSURP1420
CSURP1421
CSURP1422
CSURP0957
CSURP0578
CSURP0992
CSURP1533
CSURP1602
CSURP1603
CSURP2863
Kk253
Kk406
Kk174
B9010090
Kk183
Kk421
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Sch 1437
Bacteria
CC173 T'
Bacteria
CC173 unique
Bacteria
BB 632
Bacteria
PED 1827
Bacteria
PED 1588
Bacteria
AA 267
Bacteria
PED 555
Bacteria
CC 132
Bacteria
D 7323
Bacteria
BB 713
Bacteria
AA 687
Bacteria
C 1735
Bacteria
EPA 451
Bacteria
EPA 009
Bacteria
Sch538*
Bacteria
12201404H
Bacteria
Bacteria
KW1
Bacteria
MRB_32_Kleb-pne_2008_Laos_Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Synovial fluid
Synovial fluid
Bone
Selles
Human
Human
Human
Human
Pharynx
Blood
Sputum
Feces
Human
Urine
Klebsiella pneumoniae
CSURP0215
CSURP0217
CSURP0218
CSURP0219
CSURP0220
CSURP0221
CSURP0222
CSURP0223
CSURP0224
CSURP0225
CSURP0226
CSURP0227
CSURP0228
CSURP0229
CSURP0230
CSURP0348
CSURP0931
CSURP1425
CSURP1426
CSURP1427
CSURP1428
CSURP1571
CSURP1572
CSURP1591
CSURP1592
CSURP1593
CSURP1594
CSURP1595
CSURP1596
CSURP1597
Kp_IL_NDM_5500
Kp_IL_KPC_360
Kp_IL_KPC_419
kp_IL_KPC_473
Kp_IL_KPC_520
Kp_IL_KPC_613
Kp_IL_KPC_695
Kp_IL_KPC_777
Kp_IL_KPC_853
Kp_IL_KPC_951
Kp_IL_KPC_1067
Kp_IL_KPC_1183
Kp_IL_KPC_1270
Kp_IL_KPC_1348
Kp_IL_NDM_1098
12180500H
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
40 T1,2 A
Bacteria
41 T1,2 B
Bacteria
43 T1,2 A
Bacteria
45 T1,2 A
Bacteria
MRB_2_Kleb-pne_2010_India_ Bacteria
MRB_3_Kleb-pne_2013_AlgeriaBacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Blood
Feces
CSURP1598
CSURP1599
CSURP1600
CSURP1601
CSURP1604
CSURP1605
CSURP1606
CSURP1607
CSURP1608
CSURP1609
CSURP1610
CSURP1611
CSURP1612
CSURP1613
CSURP1614
CSURP1615
CSURP1616
CSURP1617
CSURP1618
CSURP1618-2
CSURP1619
CSURP1620
CSURP1621
CSURP1622
CSURP1623
CSURP1947
CSURP1955
CSURP1956
CSURP1957
CSURP1958
MRB_80_Kleb-pne_France_Hu Bacteria
MRB_88_Kleb-pne_2010_Alger Bacteria
CSURP1959
CSURP1960
CSURP1967
CSURP1968
CSURP1969
CSURP1970
CSURP1971
CSURP1972
CSURP1973
CSURP1974
CSURP1975
CSURP2045
CSURP2046
CSURP2047
CSURP2048
CSURP2051
CSURP2052
CSURP2053
CSURP2054
CSURP2055
CSURP2056
CSURP2061
CSURP2062
CSURP2063
CSURP2205
CSURP2577
Klebsiella pneumoniae subsp. OzaenaeCSURP0249
Klebsiella pneumoniae subsp. PneumonCSURP0130
Klebsiella pneumoniae subsp. pneumonCSURP0131
Klebsiella pneumoniae subsp. PneumonCSURP0250
MRB_100_Kleb-pne_2014_FranBacteria
MRB_112_Esch-col_2013_FranBacteria
Bacteria
Bacteria
Bacteria
KPMnasey
Bacteria
NDM-1
Bacteria
Bacteria
Human
Human
Feces
Urine
Human
Broncho-alveolar lavage
Klebsiella pneumoniae subsp. RhinosclCSURP0248
Klebsiella rhinoscleromatis
CSURP1048
Klebsiella singaporensis
CSURP1307
Kluyvera ascorbata
CSURP1152
Kluyvera cryocrescens
CSURP1406
Kocuria carniphila
CSURP1367
Kocuria flavus
CSURP2307
Kocuria kristinae
CSURP0599
Kocuria marina
CSURP0926
Kocuria marina
CSURP2363
Kocuria palustris
CSURP0699
Kocuria rhizophila
CSURP0662
Kocuria rhizophila
CSURP1655
Kocuria rhizophila
CSURP1712
Kocuria rhizophila
CSURP2672
Kocuria rosea
CSURP0559
Kocuria varians
CSURP2273
Kroppenstedtia eburnea
CSURP2293
Kurthia gibsonii
CSURP0668
Kurthia massiliensis
CSURP0140
CSURP0141
CSURP0806
Kurthia senegalensis
CSURP0138
Kurthia senegalensis
CSURP0142
ND
peau19
ND
ND
KW12
N6
ND
ND
JC31
JC30 T
ND
JC8E T
JC8J
T
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Environment
Human
Human
Human
Human
Human
Human
Human
Human
Human
Bacteria
Human
Feces
Bacteria
Human
Feces
Human
Feces
Human
Urine
Kurthia timonensis
CSURP0139
Kytococcus schroeteri
CSURP0560
Dielmo
ND
Kytococcus sedentarius
CSURP0728
ND
Bacteria
Labedella massiliensis
CSURP3023
FF2
Bacteria
Lachnoclostridium urinomassiliense
CSURP2804
Marseille-P2804T
Bacteria
Feces
Feces
Feces
Feces
Feces
Skin (soap)
Blood
Feces
Skin (soap)
Feces
Feces
Feces
Feces
Permafrost
Feces
Feces
Ovarian biopsy
Feces
Feces
Feces
Feces
Feces
Feces
Bacteria
Human
Feces
Kw
Bacteria
Human
Feces
CSURP1820
OB3
Bacteria
Human
Feces
Lactobacillus agilis
CSURP1823
duo
Bacteria
Human
Duodenum
Lactobacillus brevis
CSURP1254
Awa
Bacteria
Human
Feces
Lactobacillus brevis
CSURP1979
Bacteria
Human
Feces
Lactobacillus buchneri
CSURP1392
Bacteria
Human
Feces
Lactobacillus casei
CSURP1255
Bacteria
Human
Feces
Lactobacillus casei
CSURP2105
Bacteria
Human
Pharynx
Lactobacillus coryneformis
Lactobacillus crispatus
CSURP2460
Bacteria
Human
CSURP1443
Bacteria
Human
Feces
Feces
Lactobacillus crispatus
Lactobacillus curvatus
CSURP2864
CSURP0899
Bacteria
Bacteria
Human
Human
Urine
Feces
Lactobacillus delbrueckii
CSURP1076
Bacteria
Human
Feces
Lactobacillus dextrinicus CSURP2091
Bacteria
Human
Feces
Lactobacillus fermentum
CSURP1018
LF
Bacteria
Human
Feces
CSURP1821
duo1
Bacteria
Human
Duodenum
CSURP1822
duo
Bacteria
Human
Duodenum
CSURP2734
CSURP306
CSURP0993
Human
Human
Selles
Lactobacillus gasseri
Bacteria
Bacteria
Bacteria
Human
CSURP2326
vagin 20
Bacteria
Human
CSURP2686
ob6
Bacteria
Human
Vagina
Selles
CSURP2687
kw2
Bacteria
Human
Selles
CSURP2688
kw
Bacteria
Human
Selles
CSURP2689
ob2
Bacteria
Human
Selles
Lactobacillus acidipiscis
CSURP2079
CSURP1212
ND
Duodenum
Feces
CSURP2695
CSURP2880
Lactobacillus gastricus
Lactobacillus harbinensis
CSURP2250
CSURP1278
Lactobacillus iners
cip 104464
Bacteria
Human
ND
Bacteria
Bacteria
Human
Human
Urine
Kw14
Bacteria
Human
Duodenum
Feces
CSURP2232
uri1
Bacteria
Human
Urine
Lactobacillus ingluvei
Lactobacillus ingluvei
Lactobacillus ingluviei
Lactobacillus jensenii
Lactobacillus jensenii
Lactobacillus johnsonii
Lactobacillus kalixensis
CSURP2694
CSURP209
CSURP0209
CSURP1125
CSURP2523
CSURP1201
CSURP1202
ATCC33323
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Animal
Human
Human
Human
Human
ND
ND
Ostrich stool
Feces
Urine
Feces
Feces
Lactobacillus kefiri
CSURP1361
Bacteria
Human
Feces
Lactobacillus lactis
Lactobacillus mucosae
Lactobacillus mucosae
Lactobacillus murinus
Lactobacillus oris
Lactobacillus parabuchneri
Lactobacillus paracasei
Lactobacillus pentosus
Lactobacillus perolens
Lactobacillus plantarum
CSURP1020
CSURP1291
CSURP1807
CSURP1019
CSURP1256
CSURP1247
CSURP0664
CSURP1812
CSURP2876
CSURP1258
CSURP1357
CSURP0651
CSURP0691
CSURP1806
CSURP2684
CSURP2685
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Duodenum
Feces
Feces
Feces
Feces
Duodenum
Urine
Feces
Feces
Selles
Feces
Duodenum
Selles
Selles
Autruche 4
Kw
duo
Kw4
Kw04
duo
Kw
Kw14
duo
kw
ob4
Lactobacillus reuteri
Lactobacillus reuteri 1
Lactobacillus reuteri 2
Lactobacillus rhamnosus
Lactobacillus rhamnosus
Lactobacillus ruminis
Lactobacillus sakei
Lactobacillus sakei
Lactobacillus salivarius
Lactobacillus satsumensis
Lactobacillus vaccinostercus
Lactobacillus vaginalis
Lactobacillus zeae
Lactococcus garvieae
Lactococcus garvieae
Lactococcus lactis
Lactococcus lactis
Lactonifactor longoviformis
Lagierella massiliensis
Lagierella massiliensis
Lascolabacillus massiliensis
Lascolacoccus vaginalis
Leclercia adecarboxylata
Legionella anisa
Legionella anisa
CSURP1122
CSURP1805
CSURP1810
CSURP2690
CSURP2691
CSURP2692
CSURP0567
CSURP0994
CSURP0908
CSURP1993
CSURP2246
CSURP1130
CSURP1811
CSURP1112
CSURP2090
CSURP0104
CSURP2554
CSURP1192
CSURP0620
CSURP1376
CSURP2483
CSURP2228
CSURP2234
CSURP2012
CSURP2280
CSURP1560
CSURP0109
CSURP0600
CSURP0066
CSURP0070
duo
Amaz1
PTA 4659
12197088H
Awa
ND
duo
ND
M17
SIT14
DSM100854
SIT8
ND
WA316C3
HL04042021
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Environment
Environment
Feces
Duodenum
Feces
ND
ND
ND
Blood
Feces
Feces
Feces
Feces
Feces
Duodenum
Feces
Feces
Feces
Vagin
Feces
Feces
Feces
Duodenum
Selles obèses
Feces
Feces
Feces
Vagina
Blood
Legionella anisa
Legionella bozemanii
Legionella drozanskii
Legionella dumoffii
Legionella dumoffii
Legionella dumoffii
Legionella erythra
Legionella fallonii
Legionella feelii
Legionella jamestowriensis
Legionella jordanis
Legionella londiniensis
Legionella londiniensis
Legionella longbeachae
Legionella longbeachae
Legionella maceachernii
Legionella massiliensis
Legionella micdodeï
Legionella parisiensis
Legionella pneumophila
Legionella pneumophila
Legionella quinlivanii
Legionella rowbothamii
Legionella rubrilucens
Legionella santicrusis
Legionella saoudiensis
Legionella tucsonensis
Legionella tunisiensis
Lelliottia amnigena
Lelliottia amnigena
CSURP1324
CSURP1337
CSURP0274
CSURP0087
CSURP0089
CSURP0090
CSURP1329
CSURP0276
CSURP1279
CSURP1335
CSURP1330
CSURP0074
CSURP1332
CSURP1338
CSURP168
CSURP1336
CSURP0146
CSURP1326
CSURP1339
CSURP0300
CSURP1373
CSURP1269
CSURP0275
CSURP1340
CSURP1282
CSURP2101
CSURP1333
CSURP0145
CSURP1459
CSURP1985
LLAP1
NY23
HL04403032
HL04403033
LLAP10
1477
1120364
Leg A
1320789
LLAP6
Leg M
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Environment
Environment
Environment
Environment
Environment
Environment
Human
Environment
Human
Human
Cooling tower water
Feces
WALLOIS
Environment
Human
Human
Environment
Human
Human
Feces
Feces
Lake water
Feces
Feces
Leptotrichia massiliensis
Leptotrichia trevisanii
Leucobacter massiliensis
Leuconostoc lactis
Leuconostoc mesenteroides
Leuconostoc mesenteroides
Levyella massiliensis
Listeria ivanovii
Listeria massiliensis
Listeria monocytogenes
Lysinibacillus boronitolerans
Lysinibacillus fusiformis
Lysinibacillus massiliensis
Lysinibacillus meyeri
Lysinibacillus saudimassiliensis
Lysinibacillus sphaericus
Lysinibacillus varians
Lysinibacillus xylanilyticus
Lysobacter soli
Macellibacteroides fermentans
Macrococcus caseolyticus
Magnusiomyces capitalis
Malnutritionisia massiliensis
Mannheimia massilioguelmaensis
Marseilla massiliensis
CSURP3007
CSURP1049
CSURP1430
CSURP1191
CSURP1252
CSURP2073
CSURP0128
CSURP1995
CSURP1423
CSURP0828
CSURP1153
CSURP0569
CSURP2236
CSURP2365
CSURP2641
CSURP1245
CSURP1154
CSURP1222
CSURP0827
CSURP2094
CSURP1246
CSURP0905
CSURP1448
CSURP1292
CSURP2401
CSURP1907
CSURP1908
CSURP1908
CSURP1431
CSURP2745
Marseille-P3007T
122RC15
9403326
PSOL06-cont
ND
ND
ND
ND
MT12 T
MT12
MG13 T
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Fungi
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Sputum
Feces
Swab from Pharynx
Feces
Feces
Feces
Abscess (unknown site)
Feces
Human
Feces
Human
Feces
Human
Feces
Feces
Human
Human
Child blood
Selles
Human
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Feces
Human
Human
Feces
Human
Feces
Feces
Human
Human
Pus sample
Human
Duodenum
Massilia timonae
Massilibacterium senegalense
Massilibacteroides vaginae
Massiliobacillus massiliensis
Massilioculturomica massiliensis
Massiliomicrobiota timonensis
Massiliomicrobiota timonensis Mediannikovella massiliensis
Mediterranea massiliensis
Mediterranea massiliensis
Megasphaera massiliensis
Megasphaera massiliensis
Mesorhizobium massiliensis
Methanobrevibacter oralis
CSURP0255
CSURP1510
CSURP1477
CSURP2411
CSURP2935
CSURP2264
CSURP2264
CSURP1934
CSURP1487
CSURP2645
CSURP0245
CSURP0705
CSURP2728
CSURP1377
CSURP1378
CSURP1379
CSURP1380
CSURP1381
CSURP1382
CSURP1383
CSURP1384
CSURP2192
CSURP2193
CSURP2194
CSURP2195
CSURP2196
CSURP2197
CSURP2198
CSURP2199
CSURP2200
Marseille-P2411
Marseille-P2935T
SN16
MT11
NP3 T
MST2
MST3
MST4
MST5
MST6
MST7
MST8
MST9
MOVD1
MOVD2
MOVD3
MOVD4
MOVD5
MOVD6
MOVD7
MOVD8
MOVD9
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Archea
Archea
Archea
Archea
Archea
Archea
Archea
Archea
Archea
Archea
Archea
Archea
Archea
Archea
Archea
Archea
Archea
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Animal
Feces
Feces
Feces
Feces
Duodenum
Feces
Feces
Feces
Feces
Duodenum
Feces
Feces
Fenolar
Dental plaque
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Methanobrevibacter smithii
Methanomassiliicoccus luminyensis
Microbacterium aurum
Microbacterium chocolatum
Microbacterium flavum
Microbacterium gorillae
Microbacterium hydrocarbonoxydans
Microbacterium kitamiense
Microbacterium kitamiense
Microbacterium neimengenese
Microbacterium oleivorans
Microbacterium oleivorans
Microbacterium oxydans
Microbacterium paraoxydans
Microbacterium phyllosphaerae
Microbacterium saccharophilum
Microbacterium schleiferi
Microbacterium yannicii
Microbacterium yannicii
Microbacterium saccharophilum
Micrococcus luteus
CSURP2001P
CSURP2002P
CSURP2003P
CSURP2004P
CSURP2186
CSURP2187
CSURP2188
CSURP2189
CSURP2190
CSURP2191
CSURP0135
CSURP0995
CSURP1268
CSURP1371
CSURP0207
CSURP2596
CSURP0789
CSURP0996
CSURP2323
CSURP0911
CSURP2514
CSURP1352
CSURP1077
CSURP2093
CSURP2065
CSURP1434
CSURP0191
CSURP1583
CSURP2065
CSURP0638
aero 1
aero 2
aero 3
aero 4
MSVD4
MSVD1
MSVD2
MSVD3
MSVD5
MSVD6
B10
Archea
Archea
Archea
Archea
Archea
Archea
Archea
Archea
Archea
Archea
Bacteria
Bacteria
Bacteria
Bacteria
G3
Bacteria
Bacteria
ND
Bacteria
Bacteria
Bacteria
tim4
ND
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
PS01 T
Bacteria
MRB_14_Micr-yan_2010_FrancBacteria
Bacteria
13002805H
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Environment
Human
Human
Environment
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Permafrost
Feces
Feces
Contact lens
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Sputum
Selles
Blood
Micrococcus luteus
Micrococcus luteus
Micrococcus luteus
Micrococcus luteus
Micrococcus luteus
Micrococcus luteus
Micrococcus luteus
Micrococcus luteus
Micrococcus luteus
Micrococcus luteus
Micrococcus luteus
Micrococcus lylae
Micromassilia fournierii
Micromassilia timonensis
Micromonospora aurantiaca
Micromonospora aurantiaca
Microvirga massiliensis
Microvirga massiliensis
Mitsuokella jalaludinii
Mobilicoccus massiliensis
Mobilincus curtisii
Mobilobacillus massiliensis
Moellerella wisconsensis
Moraxella catarrhalis
Moraxella lacunata
Moraxella lincolnii
Moraxella nonliquefaciens
Moraxella osloensis
Moraxiella osloensis
CSURP0792
CSURP1532
CSURP1535
CSURP1539
CSURP1708
CSURP1715
CSURP1719
CSURP2347
CSURP2581
CSURP2671
CSURP2277
CSURP0562
CSURP2271
CSURP2133
CSURP0595
CSURP0821
CSURP0153
CSURP1328
CSURP2245
CSURP1306
CSURP2560
CSURP3067
CSURP296
CSURP0997
CSURP1120
CSURP1474
CSURP0790
CSURP0768
CSURP0768
Kw14
KWA1
amazoniae
KW6
OB6
KW6
Ama 1
peau3
mammouth10
ND
GD9
ND
ND
JC119T
ND
ND
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Skin (soap)
Urine
Permafrost
Blood
Feces
Vagina
Feces
ND
Feces
Feces
Feces
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Environment
Human
Human
Human
Human
Human
Human
Human
Human
Bacteria
Human
Feces
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Vagin
Duodenum
Feces
Feces
Feces
Feces
Sputum
Feces
Feces
Morganella morganii
Morganella morganii
Morganella morganii
Morganella morganii
Murdochiella asaccharolytica
Murdochiella massiliensis
Murdochiella massiliensis
Murdochiella vaginalis
Mycobacterium abscessus
Mycobacterium abscessus
Mycobacterium acapulcensis tahiti
Mycobacterium africanum
Mycobacterium ahvazicum
Mycobacterium ahvazicum
Mycobacterium avium chimerae
Mycobacterium bovis
Mycobacterium bovis
Mycobacterium canettii
Mycobacterium caprae
Mycobacterium chelonae
Mycobacterium chimaerae
Mycobacterium colombiense
Mycobacterium elephantis
Mycobacterium europaeum
Mycobacterium europaeum
Mycobacterium fortuitum
Mycobacterium hominissuis
CSURP0213
CSURP0752
CSURP1584
CSURP2524
CSURP2387
CSURP1987
CSURP1987
CSURP2341
CSURP0143
CSURP0144
CSURP1424
CSURP0041
CSURP0181
CSURP0182
CSURP134
CSURP0039
CSURP0042
CSURP0045
CSURP0251
CSURP1923
CSURP0046
CSURP0297
CSURP2724
CSURP1344
CSURP1345
CSURP1562
CSURP1563
CSURP1565
CSURP1566
CSURP0050
CTX-M-15
Bacteria
ND
Bacteria
MRB_15_Morg-mor_2011_Isra Bacteria
Bacteria
Bacteria
Bacteria
SIT12
Bacteria
Marseille-P2341T
Bacteria
11360469
Bacteria
11363351
Bacteria
M80
Bacteria
CIP 105147
Bacteria
T
Bacteria
AFP003
AFP004
Bacteria
10369856
Bacteria
BCG
Bacteria
CIP 105050
Bacteria
CIP 1400159
Bacteria
Bacteria
Bacteria
8350781
Bacteria
Bacteria
Bacteria
1913836
Bacteria
2053199
Bacteria
7WA11
Bacteria
6WA12
Bacteria
6WA11
Bacteria
5WA4
Bacteria
8351089
Bacteria
Human
Human
Feces
Human
Human
Human
Human
Human
Human
Human
Urine
Feces
Feces
Vagina
Vagina
Sputum
Sputum
Human
Human
Human
Sputum
hronic Pulmonary diseas
Sputum
Human
Human
Human
Animal
Feces
Sputum
unknown
Fenolar
Human
Pulmonary aspiration
Mycobacterium icosiumassiliensis
Mycobacterium kansasii
Mycobacterium microti
Mycobacterium oxydans
Mycobacterium pinnipedii
Mycobacterium porcinum
Mycobacterium scepticum
Mycobacterium tahiti
Mycobacterium tahiti massiliensis
Mycobacterium tahiti massiliensis
Mycobacterium tuberculosis
CSURP0058
CSURP0059
CSURP0064
CSURP1561
CSURP0063
CSURP1567
CSURP1569
CSURP0043
CSURP1986
CSURP0044
CSURP1564
CSURP1568
CSURP1385
CSURP1342
CSURP1343
CSURP0034
CSURP0037
CSURP0038
CSURP0040
CSURP0047
CSURP0048
CSURP0049
CSURP0051
CSURP0052
CSURP0053
CSURP0054
CSURP0055
CSURP0056
CSURP0057
CSURP0060
8353921
8354064
8354733
8WA6
8354895
15WA2
15WA1
CRBIP7-40
11WA5
5WA3
M24
MT11
MT14
8355027
8350007
8350231
H37RV
8350828
8350944
8350649
8350539
8350992
8352107
8351763
8351846
8353523
8353482
8354780
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Feces
Human
Sputum
Human
Animal
Feces
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Sputum
Sputum
Sputum
Lymph node
Sputum
Sputum
Sputum
Lung biopsy
Sputum
Sputum
Myroides odoratimimus
Myroides odoratus
Ndiopella massiliensis
Ndiopella massiliensis
Necropsobacter massiliensis
Negativicoccus massiliensis
Negativicoccus massiliensis
Negativicoccus succicivorans
Negativicoccus succinicivorans
Neglecta timonensis
Neisseria canis
Neisseria cibaria
Neisseria elongata
Neisseria elongata
Neisseria elongata
Neisseria flavescens
Neisseria gonorrhoeae
Neisseria macacae
Neisseria macacae
Neisseria meningitidis
Neisseria meningitidis
Neisseria mucosa
CSURP0062
CSURP0133
CSURP0136
CSURP0137
CSURP1203
CSURP1432
CSURP1917
CSURP2000
CSURP3511
CSURP2082
CSURP2082
CSURP2924
CSURP1021
CSURP2265
CSURP1391
CSURP0645
CSURP0831
CSURP1672
CSURP1681
CSURP1293
CSURP1717
CSURP1722
CSURP0606
CSURP1705
CSURP1706
CSURP0882
CSURP1721
CSURP0602
CSURP0782
CSURP0619
8354955
10370412
11360343
11360544
SIT11 T
FF6
SN17
ND
ND
Ama 2
KW 6
OB3
kw9
ND
KW12
Ama 1
ND
Ama2
ND
ND
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Sputum
Sputum
Sputum
Sputum
Feces
Feces
Feces
Feces
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Selles
Urine
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Sputum
Feces
Feces
Neisseria mucosa
Neisseria mucosa
Neisseria mucosa
Neisseria weaveri
Neofamilia massiliensis
Nesterenkonia lacusekhoensis
Nesterenkonia massiliensis
New Spe Asaia
Niameyia massiliensis
Niameyia massiliensis
Nigerium massiliensis
Nocardia abscessus
Nocardia brasiliensis
Nocardia cyriageorgia
Nocardia farcinica
Nocardia transvalensis
Nocardia wallecei
Nocardioides massiliensis
Nocardiopsis massilioalgeriensis
Nosocomiicoccus ampulae
Nosocomiicoccus massiliensis
Numidum massiliensis
Occidentia massiliensis
Oceanobacillus iheyensis
Oceanobacillus jeddahense
Oceanobacillus manasiensis/picturae
Oceanobacillus manasiensis/picturae
Oceanobacillus massiliensis
CSURP1716
CSURP1720
CSURP2617
CSURP1170
CSURP1998
CSURP1171
CSURP0244
CSURP1439
CSURP1909
CSURP1909
CSURP1302
CSURP1172
CSURP1294
CSURP0881
CSURP1353
CSURP1295
CSURP0824
CSURP0894
CSURP1097
CSURP0643
CSURP0246
CSURP0556
CSURP1997
CSURP1305
CSURP0764
CSURP1365
CSURP1091
CSURP2542
CSURP2543
CSURP0132
SAN1
marasme 9
MT14 T
MT14
GD13 T
EB03 DSM 45938
109506t / 7107
NP2 T
OS118
S5
n'diop
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Pharynx
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Human
Human
Human
Human
Human
Animal
Human
Human
Human
Human
Blood
Feces
Feces
Feces
ithodoros sonrai entire b
Feces
Feces
Halophilic feces
Halophilic feces
ND
Oceanobacillus massiliensis
Oceanobacillus oncorhynchi
Oceanobacillus sojae
Oceanobacillus sojae
Ochrobactrum anthropi
Odoribacter splanchnicus
Oerskovia turbata
Olegusella massiliensis
Oligella urethralis
Olsenella massiliensis
Olsenella phoceensis
Olsenella provencensis
Olsenella uli
Ornithinibacillus contaminans
Ornithinibacillus contaminans
Pacaela massiliensis
Paenibacillus alvei
Paenibacillus amylolyticus
Paenibacillus anaericanus
Paenibacillus antibioticophila
Paenibacillus antibioticophila
Paenibacillus azoreducens
Paenibacillus barcinonensis
Paenibacillus barengoltzii
Paenibacillus camerounensis
Paenibacillus cineris
CSURP0736
CSURP0973
CSURP2463
CSURP2464
CSURP1102
CSURP1173
CSURP0818
CSURP0862
CSURP2256
CSURP2646
CSURP2164
CSURP2268
CSURP0320
CSURP1476
CSURP2936
CSURP3066
CSURP1078
CSURP2075
CSURP2075
CSURP2770
CSURP0874
CSURP2942
CSURP2108
CSURP1358
CSURP2175
CSURP2080
CSURP0998
CSURP1497
CSURP0208
CSURP1402
ND
OC-5
Sk-2
ND
ND
12179398H
Marseille-P2936T
Marseille-P2912T
Marseille-P2770T
ND
GD11 T
G4
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Environment
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Feces
Halophylic feces
Feces
Feces
Feces
Feces
Feces
Duodenum
Selles
Vagina
Blood
Feces
Duodenum
Duodenum
Feces
Feces
Selles
Feces
Feces
Permafrost
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Paenibacillus dakarensis
Paenibacillus dendritiformis
Paenibacillus favisporus
Paenibacillus glucanolyticus
Paenibacillus humicus
Paenibacillus ihumii
Paenibacillus illinoisensis
Paenibacillus jamilae
Paenibacillus lactis
Paenibacillus lautus
Paenibacillus lautus
Paenibacillus macerans
Paenibacillus marseillensis
Paenibacillus massiliensis
Paenibacillus motobuensis
Paenibacillus numidis
Paenibacillus odorifer
Paenibacillus phoceensis
Paenibacillus provencensis
Paenibacillus pueri
Paenibacillus pueri
Paenibacillus puldeungensis
Paenibacillus reamassiliensis
Paenibacillus reamassiliensis
Paenibacillus rhizosphaerae
Paenibacillus rubiinfantis
CSURP1429
CSURP0568
CSURP1403
CSURP0871
CSURP1204
CSURP1981
CSURP2071
CSURP2310
CSURP0646
CSURP2278
CSURP0746
CSURP1022
CSURP2516
CSURP1405
CSURP0205
CSURP0282
CSURP1455
CSURP1475
CSURP2009
CSURP2238
CSURP0281
CSURP0793
CSURP2737
CSURP1978
CSURP2359
CSURP2609
CSURP0892
CSURP0910
CSURP1079
CSURP2076
FF9
ND
ND
AT5
ND
ND
G1
2301065T
GM2
4401170T
ND
peau15
GD6 T
ND
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Environment
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Blood
Feces
Feces
Feces
Feces
Cerebrospinal fluid
Feces
Permafrost
Feces
Skin (soap)
Feces
Feces
Feces
Feces
Feces
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Blood
Feces
Feces
Feces
Feces
Feces
Feces
Blood
Feces
6021080542
Feces
Feces
Human
Human
Environment
Human
Human
Human
Human
Urine
Feces
Permafrost
Duodenum
Feces
Feces
Feces
Bacteria
Human
Cephalo-rachidian
CSURP1397
Bacteria
Human
Feces
Pantoea dispersa
CSURP1205
Bacteria
Human
Feces
Pantoea encrina
CSURP1389
Bacteria
Human
Feces
Pantoea massiliensis
CSURP3024
Pantoea septica
Pantoea septica
Pantoea septica
Parabacteroides distasonis
CSURP1370
CSURP2571
CSURP2674
CSURP0876
Paenibacillus sanguinis
Paenibacillus senegalensis
Paenibacillus senegalomassiliensis
Paenibacillus stellifer
Paenibacillus thiaminolyticus
Paenibacillus timonensis
Paenibacillus turicensis
Paenibacillus tyraminigenes
Paenibacillus tyraminigenes
Paenibacillus urinalis
Paenibacillus vini
Pandoraea pulmonicola
Pantoea agglomerans
Pantoea ananatis
CSURP0283
CSURP0157
CSURP0756
CSURP0897
CSURP2144
CSURP0113
CSURP0665
CSURP0284
CSURP0712
CSURP2272
CSURP1921
CSURP0999
CSURP1092
CSURP0280
CSURP1320
CSURP2673
CSURP2973
CSURP1000
CSURP0815
CSURP1213
230183T
JC66T
ND
ND
Pantoea calida
CSURP0597
ND
Pantoea conspicua
ND
2301032T
ND
STs
5402403T
ND
FF5
Bacteria
ND
Bacteria
Bacteria
Bacteria
Bacteria
Human
Environment
Environment
Human
Feces
Permafrost
Permafrost
Feces
Parabacteroides goldsteinii
Parabacteroides goldsteinii
Parabacteroides gordonii
Parabacteroides massiliense
Parabacteroides merdae
Paracoccus yeei
Paracoccus yeei
Paraliobacillus massiliensis
Parvimonas micra
Parvimonas micra
Parvimonas micra
Pascala massiliensis
Pasteurella bettyae
Pasteurella canis
Pasteurella dagmatis
Pasteurella multocida
Pasteurella multocida
Pasteurella stomatis
Paucisalibacillus algeriensis
Paucisalibacillus globulus
Pediococcus acidilactici
Pediococcus pentosaceus
Pediococcus pentosaceus
Pedobacter cryoconitis
Pelistega massiliensis
Peptoniphilus asaccharolyticus
CSURP0623
CSURP1372
CSURP2178
CSURP2231
CSURP0594
CSURP0657
CSURP2668
CSURP0975
CSURP0875
CSURP2908
CSURP2136
CSURP1085
CSURP1248
CSURP0598
CSURP0698
CSURP1308
CSURP1684
CSURP1080
CSURP0858
CSURP1001
CSURP0618
CSURP1347
CSURP2873
CSURP0826
CSURP1804
CSURP2597
CSURP2015
CSURP1050
CSURP1863
CSURP1864
12222993H
ND
ND
PM-2 T
ND
11151532
ND
ND
HIV
A25 / EB02
ND
ND
Amaz2
Amaz2
KW5
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Blood
Human
Human
Feces
Human
Feces
Selles
Human
Human
Feces
Human
Feces
Environment
Permafrost
Human
Feces
Human
Tonsil abscess
Human
Pharynx
Pharynx
Human
Human
Human
Feces
Human
Articular fluid
Human
Feces
Human
Feces
Human
Feces
Human
Feces
EnvironmentHypersaline sail in Algeri
Human
Feces
Human
Feces
Human
Feces
Human
Urine
Human
Feces
Human
Feces
Environment
Permafrost
Human
Urines
Human
Feces
Human
Feces
Human
Feces
Peptoniphilus coxii
Peptoniphilus duodenumensis
Peptoniphilus gorbachii
Peptoniphilus gorbachii
Peptoniphilus grossensis
Peptoniphilus harei
Peptoniphilus harei
Peptoniphilus harei
Peptoniphilus harei
Peptoniphilus ihumii
Peptoniphilus koenoeneniae
Peptoniphilus lacrimalis
Peptoniphilus lacydonense
Peptoniphilus massiliensis
Peptoniphilus obesihominis
Peptoniphilus olsenii
Peptoniphilus pacaensis
Peptoniphilus pacaensis
Peptoniphilus phoceensis
Peptoniphilus raoultii
Peptoniphilus senegalensis
Peptoniphilus senegalensis
Peptoniphilus timonensis
Peptoniphilus vaginalis
CSURP2492
CSURP2932
CSURP1193
CSURP2257
CSURP0184
CSURP2329
CSURP307
CSURP0340
CSURP1127
CSURP2553
CSURP2104
CSURP1283
CSURP2068
CSURP1155
CSURP2269
CSURP2485
CSURP2013
CSURP0254
CSURP0187
CSURP0258
CSURP1051
CSURP0901
CSURP2270
CSURP2339
CSURP2183
CSURP110
CSURP0154
CSURP1052
CSURP2290
CSURP0125
5120943791
Marseille-P2932T
PH5 T
vagin 23
12178312H
vagin15
PH1 T
ND
SIT 15 T
JC140T
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Abcès tissus mous
Duodenum
Feces
Duodenum
Feces
Vagina
Duodenum
Blood
Feces
Vagin
Pharynx
Feces
Feces
Feces
Vagina
Vagina
Feces
Feces
Feces
Feces
Feces
Arthritis
Vagina
Feces
Feces
Feces
Feces
Feces
Duodenum
Feces
Peptostreptococcus anaerobius
Peptostreptococcus anaerobius
Peptostreptococcus russellii
Petrimonas sulfuriphila
Phenylobacterium koreense
Pichia caribicca
Pichia kudriavze
Pichia manshurica
Pichia sp.
Planococcus rifietoensis
Planomicrobium chinense
Planomicrobium glaciei
Planomicrobium massiliensis
Planomicrobium massiliensis
Planomicrobium okeanokoites
Planomicrobium okeanokoites
Polynesia massiliensis
Porphyromonas asaccharolytica
CSURP1053
CSURP2555
CSURP0304
CSURP1901
CSURP1355
CSURP2397
CSURP1509
CSURP2396
CSURP2167
CSURP0674
CSURP0734
CSURP2599
CSURP1103
CSURP1206
CSURP2029
CSURP2029
CSURP1280
CSURP0716
Prachlamydia diamant
Preussia minima
Prevotella amnii
Prevotella bergensis
Prevotella bivia
CSURP2508
CSURP2531
CSURP1364
CSURP1919
CSURP1229
Prevotella buccae
Prevotella buccae
Prevotella caccae
Prevotella clara
Prevotella conceptionensis
Prevotella conceptionensis
Prevotella copri
CSURP1054
CSURP2592
CSURP2931
CSURP2647
CSURP0124
CSURP1156
CSURP1529
ND
ND
ES2
ND
Diamant
Marseille-P2931T
9403942
Feces
Vagin
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Permafrost
Feces
Feces
Feces
Feces
Feces
Scrotum abces
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Fungi
Fungi
Fungi
Fungi
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Fungi
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Environment
Human
Human
Human
Human
Human
Human
Amoeba
Human
Human
Human
Human
Feces
Feces
Feces
Feces
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Feces
Pharynx
Duodenum
Duodenum
Sinusitis
Feces
Feces
Prevotella corporis
Prevotella denticola
Prevotella denticola
Prevotella histicola
Prevotella intermedia
Prevotella ioscheii
Prevotella melaninogenica
Prevotella nanceiensis
Prevotella nigrescens
Prevotella phoceensis
Prevotella salivae
Prevotella veroralis
Propionibacterium acidifaciens
Propionibacterium acidifaciens
Propionibacterium acidipropionici
Propionibacterium acidipropionici
Propionibacterium acnes
Propionibacterium australiense
Propionibacterium avidum
Propionibacterium freudenreichii
CSURP1388
CSURP1023
CSURP2893
CSURP1055
CSURP1056
CSURP1988
CSURP1057
CSURP1114
CSURP1129
CSURP2259
CSURP2917
CSURP0823
CSURP0261
CSURP1470
CSURP1369
CSURP2295
CSURP0637
CSURP0742
CSURP1713
CSURP1714
CSURP1750
CSURP1754
CSURP2906
CSURP0262
CSURP0872
CSURP1745
CSURP2213
CSURP2257
CSURP2576
CSURP0941
ND
ND
13001088H
ND
KW6
KW1
KW 12
Ama 2
ND
KW12
vagin8
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Pharynx
Feces
Feces
Feces
Feces
Feces
Feces
Feces
Duodenum
Feces
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Duodenum
Blood
Feces
Feces
Feces
Feces
Feces
Pharynx
Human
Human
Human
Human
Human
Human
Feces
Feces
Vagina
Duodenum
Urine
Feces
Propionibacterium freundii
CSURP0571
Propionibacterium granulosum
CSURP1081
Propionibacterium innocuum
CSURP0263
Propionimicrobium lymphophilum
CSURP1174
CSURP2923
CSURP0108
Proteus hauseri
CSURP1277
Proteus mirabilis
CSURP0212
Proteus mirabilis
CSURP0632
Proteus mirabilis
CSURP0868
Proteus mirabilis
CSURP2049
Proteus mirabilis
CSURP2548
Proteus mirabilis
CSURP2578
Proteus penneri
CSURP1233
Proteus vulgaris
CSURP0382
Proteus vulgaris
CSURP0722
Proteus vulgaris
CSURP1693
Proteus vulgaris
CSURP1867
Proteus vulgaris
CSURP1868
Protochlamydia greubae
CSURP2506
Providencia alcalifaciens
CSURP0807
Providencia heimbachae
CSURP1157
Providencia heimbachae
CSURP2169
Providencia rettgeri
CSURP0214
Providencia stuartii
CSURP1002
CSURP1683
CSURP2204
Providentia kettzeri
CSURP0765
Pseudoacidovorax intermedius
CSURP1354
Pseudochrobactrum asaccharolyticum CSURP0704
12198945H
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Pm_IL_NDM_1014
Bacteria
13001716H
Bacteria
ND
Bacteria
MRB_114_Prot-mir_2013_FranBacteria
Bacteria
Bacteria
Bacteria
12182635H
Bacteria
ND
Bacteria
Ama 2
Bacteria
97
Bacteria
100
Bacteria
C2
Bacteria
ND
Bacteria
Bacteria
Bacteria
Pr_IL_NDM_1736
Bacteria
Bacteria
KW12
Bacteria
Bacteria
ND
Bacteria
Bacteria
ND
Bacteria
Human
Human
Blood
Feces
Human
Human
Human
Human
Human
Human
Human
Feces
Urine
Feces
Feces
Blood
Feces
Human
Human
Human
Human
Human
Human
Vagin
Urine
Feces
Blood
Leg infection
Feces
Amoeba
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Feces
Urine
Feces
Feces
Feces
Feces
Feces
Pseudoclavibacter alba
Pseudoclavibacter faecalis
Pseudoclavibacter massiliense
Pseudomonas aeruginosa
Pseudomonas alcaligenes
Pseudomonas bauzanensis
Pseudomonas caricapapayae
Pseudomonas chlororaphis
Pseudomonas citronellis
Pseudomonas fluorescens
Pseudomonas fragi
Pseudomonas fulva
Pseudomonas halophila
Pseudomonas lundensis
CSURP2081
CSURP1274
CSURP0912
CSURP0211
CSURP0289
CSURP0563
CSURP1003
CSURP1576
CSURP1581
CSURP1667
CSURP1677
CSURP1948
CSURP1949
CSURP1950
CSURP1951
CSURP1952
CSURP1953
CSURP2201
CSURP2283
CSURP2611
CSURP0738
CSURP1436
CSURP1507
CSURP1896
CSURP0767
CSURP2077
CSURP1897
CSURP1024
CSURP0979
CSURP1893
Bacteria
Bacteria
ND
Bacteria
LESB58
Bacteria
12176901H
Bacteria
12196203H
Bacteria
Bacteria
MRB_7_Pseu-aer_2006_LebanoBacteria
MRB_12_Pseu-aer_2013_LebanBacteria
KW5
Bacteria
Ama 2
Bacteria
MRB_81_Pseu-aer_2010_Alger Bacteria
Bacteria
vagin2
Bacteria
Bacteria
ND
Bacteria
Bacteria
Bacteria
Bacteria
ND
Bacteria
Bacteria
Bacteria
Bacteria
Pseu-H
Bacteria
Bacteria
Feces
Feces
Feces
Human
Human
Human
Human
Human
Human
Human
Blood
Blood
Urine
Human
Human
Feces
Feces
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Feces
Vagina
Urine
Median abdominal scar
Feces
Feces
Feces
Blood
Feces
Feces
Feces
Feces
Feces
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Bacteria
Feces
Human
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Environment
Permafrost
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Human
Feces
Selles
Human
Human
Feces
Human
Feces
Feces
Human
Human
Feces
Human
Feces
CSURP1025
Bacteria
Human
Feces
Raoultella ornithinolytica
CSURP2310
Bacteria
Human
Feces
Raoultella terrigena
CSURP2242
Bacteria
Human
Feces
CSURP1980
Bacteria
Human
Rasbobacterium massiliensis
CSURP1341
Bacteria
Reyranella massiliensis
CSURP0115
Pseudomonas luteola
Pseudomonas massiliensis
Pseudomonas mendocina
Pseudomonas mendocina
Pseudomonas mosselii
Pseudomonas orytihabitans
Pseudomonas oryzihabitans
Pseudomonas plecoglossicida
Pseudomonas putida
Pseudomonas putida
Pseudomonas rhodesiae
Pseudomonas saudimassiliensis
Pseudomonas saudiphocaensis
Pseudomonas stutzeri
Pseudomonas taetrolens
Pseudomonas xanthomarina
Psychrobacter faecalis
Psychrobacter phenylpyruvicus
Psychrobacter pulmonis
Psychrobacter pulmonis
Pyramidobacter piscolens
Rahnella acquatilis
Ralstonia insidiosa
CSURP0695
CSURP1334
CSURP0617
CSURP0737
CSURP1351
CSURP2735
CSURP0854
CSURP1175
CSURP0660
CSURP1743
CSURP1314
CSURP1220
CSURP1224
CSURP0757
CSURP1895
CSURP1313
CSURP1271
CSURP2162
CSURP1298
CSURP1299
CSURP2428
CSURP1346
CSURP1348
ND
Clm T
ND
ND
ND
ND
HIV
ND
521 T
Bacteria
Environment
Water (river)
CSURP0116
181
Bacteria
Environment
Cooling tower water
CSURP0117
3B26
Bacteria
Environment
Cooling tower water
Rhizobacterium radiobacter
CSURP0440
12184296H
Bacteria
Human
Blood
Rhizobacterium radiobacter
CSURP1482
Bacteria
Human
Feces
Rhizobium radiobacter
Rhodococcus corynebacteroides
CSURP2550
CSURP1922
Bacteria
Bacteria
Human
Human
Vagin
Feces
Rhodococcus erythropolis
CSURP1386
Bacteria
Human
Feces
Rhodococcus rhodochrous
CSURP1273
Bacteria
Human
Feces
Rhodopirellula baltica
CSURP0169
2ILRT
Bacteria
Environment Mediterranean Sea water
CSURP0170
3LRT
Bacteria
CSURP0171
4ILRT
Bacteria
CSURP0172
5ILRT
Bacteria
Rhodopirellula callelonga
CSURP0173
4ML30
Bacteria
CSURP0174
1ILRT
Bacteria
CSURP0175
1MLRT
Bacteria
CSURP0176
5IL30
Bacteria
Rhodotorula mucilaginosa
CSURP2152
Fungi
Human
Feces
Rhodotorula mucilaginosa
Rhodotorula sp.
CSURP2448
Fungi
Fungi
Human
Human
Feces
Feces
Rickettsia conorii
CSURR0182
RC141
Bacteria
Rickettsia conorii
CSURR0183
RC142
Bacteria
Risungbinella massiliensis
CSURP1082
GD1 T
Bacteria
Human
Feces
Robinsoniella peoriensis
CSURP1158
Bacteria
Human
Feces
Robinsoniella peoriensis
Romboutsia lituseburensis
CSURP2368
Bacteria
Human
Bacteria
Human
Feces
Feces
Romboutsia massiliensis
CSURP2087
Bacteria
Human
Feces
CSURP2172
CSURP0841
ND
Romboutsia massiliensis
Romboutsia timonensis
Roseomonas mucosa
CSURP2509
CSURP0326
Feces
Bacteria
Bacteria
Human
Human
Duodenum
CSURP0774
ND
Bacteria
Human
Blood
Rothia aeria
CSURP0667
ND
Bacteria
Human
Feces
Rothia dentocariosa
CSURP0930
Bacteria
Human
Feces
Rothia dentocariosa
CSURP1734
Amaz2
Bacteria
Human
Feces
Rothia mucilaginosa
CSURP0730
ND
Bacteria
Human
Feces
Rothia mucilaginosa
CSURP2762
CSURP1473
MT6 T
Bacteria
Bacteria
Human
Human
Pharynx
Feces
CSURP0942
Rubis
Bacteria
Animal
Amoeba
CSURP2507
CSURP2452
Rubis
Bacteria
SIT6
Bacteria
Amoeba
Human
Bacteria
Human
Feces
Feces
Bacteria
Human
Feces
Bacteria
Human
Feces
Rubeoparvulum massiliense
Rubidus massiliensis
Rubidus massiliensis
Rubiinfantum massiliense
Ruminococcus obeum
CSURP1452
Ruminococcus phoceensis
CSURP2086
Rummeliibacillus pycnus
CSURP0819
Rummeliibacillus stabekisii
CSURP1444
Bacteria
Human
Feces
Saccharomyces cerevisiae
CSURP1502
Fungi
Human
Feces
Saccharomyces cerevisiae
CSURP2155
Fungi
Human
Feces
Salinicoccus roseus
Salinisphaera halophila
CSURP2424
CSURP0978
Bacteria
Human
Bacteria
Human
Halophylic feces
Feces
Salinivibrio costicola
Salmonella enterica
CSURP2423
CSURP1083
Bacteria
Human
Bacteria
Human
Halophylic feces
Feces
Salmonella enterica enterica
CSURP1219
100RC3
Bacteria
Human
Feces
Salmonella enteritidis
Salmonella paratyphi
CSURP2209
CSURP1176
tim3
Bacteria
Human
Feces
Salmonella typhi
CSURP0624
12228841H
Human
Blood
AT10
ND
J-1
Bacteria
Bacteria
Salmonella typhi
CSURP1363
Bacteria
Human
Feces
Salmonella typhimurium
CSURP1177
Bacteria
Sanguibacteroides massiliense
CSURP2336
Bacteria
Human
Feces
Sarcina ventriculi
CSURP1026
Bacteria
Human
Feces
Senegalemassilia anaerobia
CSURP1234
Bacteria
Human
Feces
Senegalia massiliensis
Senegalimassilia anaerobia
CSURP2130
CSURP0147
Bacteria
Human
Feces
JC110T
Bacteria
Human
Feces
senegalimassilia anaerobia
CSURP0197
AP4
Bacteria
Human
Feces
Serratia ficaria
CSURP0839
ND
Bacteria
Human
Feces
Serratia fonticola
CSURP1090
B6
Bacteria
Serratia fonticola
CSURP1159
Bacteria
Human
Feces
Serratia liquefaciens
CSURP1449
Bacteria
Human
Feces
Serratia liquefaciens
CSURP1692
KW12
Bacteria
Human
Feces
Serratia marcescens
CSURP0587
12206589H
Bacteria
Human
Blood
Serratia marcescens
CSURP0833
ND
Bacteria
Human
Feces
Serratia marcescens
CSURP1873
MRB_57
Bacteria
Serratia odorifera
CSURP1466
Bacteria
Human
Feces
Serratia plymuthica
CSURP1322
Bacteria
Human
Feces
Serratia rubidae
CSURP1433
Bacteria
Human
Feces
Serratia ureilytica
CSURP1249
Bacteria
Human
Feces
Shewanella algae
CSURP0601
ND
Bacteria
Human
Skin
Shewanella xiamenensis
CSURP2223
PG111D
Bacteria
Human
Feces
Shewanella xiamenensis
Slackia exigua
CSURP2224
CSURP1160
PG111B
Bacteria
Human
Feces
Bacteria
Human
Feces
Slackia exigua
Soleaferrea massiliensis
CSURP2903
Bacteria
Bacteria
Human
Human
Pharynx
Feces
CSURP0200
GM7 T
AP7
Solibacillus silvestris
CSURP2017
Bacteria
Human
Feces
Solobacterium moorei
CSURP1161
Bacteria
Human
Feces
Solobacterium moorei
Sphingobacterium multivorum
CSURP2905
Bacteria
Bacteria
Human
Human
Pharynx
Feces
Sphingobacterium multivorum
CSURP1350
Bacteria
Human
Feces
Sphingobacterium spiritivorum
CSURP2020
Bacteria
Human
Sphingomonas aerolata
CSURP1458
Bacteria
Human
Feces
Sphingomonas mucosissima
CSURP1250
Bacteria
Human
Feces
Sphingomonas paucimobilis
CSURP1027
Bacteria
Human
Feces
Sphingomonas paucimobilis
CSURP1707
Bacteria
Human
Feces
Sphingomonas sanguis
Sporolactobacillus laevolacticus
CSURP2364
Bacteria
Human
CSURP1214
Bacteria
Human
Sputum
Feces
Sporosarcina aquimarina
CSURP2030
Bacteria
Human
Sporosarcina aquimarina
Sporosarcina koreensis
CSURP2030
CSURP1237
Bacteria
Bacteria
Human
Human
Sporosarcina koreensis
CSURP1327
Bacteria
Human
Feces
Sporosarcina luteola
CSURP0677
ND
Bacteria
Human
Feces
Staphylococcus arlettae
CSURP0890
ND
Bacteria
Human
Feces
Staphylococcus arlettae
Staphylococcus aureus
CSURP2419
Bacteria
Human
Feces
CSURP0178
Pedde Louis
CSURP1943
MRB_76_Stap-aur_2006_FrancBacteria
CSURP1946
MRB_79_Stap-aur_France_HumBacteria
CSURP2200
Bacteria
Human
Feces
Bacteria
Human
CSURP2222
CSURP2357
Bacteria
Human
Endocarditis
Skin (soap)
CSURP2557
Bacteria
Human
Vagin
CSURP0816
ND
KW12
tim2
peau13
Feces
Selles
Feces
Bacteria
CSURP2579
Bacteria
Human
Urine
CSURP2894
CSURP0584
12205892H
Bacteria
Bacteria
Human
Human
Pharynx
Blood
CSURP0749
ND
Bacteria
Human
Feces
Staphylococcus auricularis
CSURP0822
ND
Bacteria
Human
Feces
Staphylococcus capitis
CSURP0311
12178917H
Bacteria
Human
Blood
CSURP0777
Kw14
Bacteria
Human
Feces
CSURP1656
Ama 2
Bacteria
Human
Feces
CSURP1658
OB1
Bacteria
Human
Feces
CSURP1659
OB3
Bacteria
Human
Feces
Staphylococcus caprae
CSURP0651
ND
Bacteria
Human
Feces
CSURP0733
ND
Bacteria
Human
Feces
CSURP1803
Amaz1
Bacteria
Human
Feces
CSURP1809
Amaz2
Bacteria
Human
Feces
Staphylococcus carnosus
CSURP1892
Bacteria
Human
Feces
Staphylococcus cohnii
CSURP0640
Bacteria
Human
Blood
CSURP1058
Bacteria
Human
Feces
CSURP2350
Bacteria
Human
Skin (soap)
CSURP2574
Bacteria
Human
Halophilic feces
Staphylococcus condimenti
CSURP2649
CSURP0648
Bacteria
Bacteria
Human
Human
Selles
Feces
Staphylococcus condimenti
Staphylococcus devriesei
CSURP2558
CSURP0920
Bacteria
Bacteria
Human
Human
Vagin
Feces
Staphylococcus epidermidis
CSURP0278
Bacteria
CSURP0285
12177875H
Bacteria
Human
Blood
CSURP0286
12177067H
Bacteria
Human
Blood
13012009H
peau6
ND
CSURP0287
12175429H
Bacteria
Human
Blood
CSURP0454
12185431H
Bacteria
Human
Blood
CSURP0585
1220613717H
Bacteria
Human
Blood
CSURP0748
ND
Bacteria
Human
Feces
Bacteria
Human
Feces
CSURP2203
CSURP2286
Bacteria
Human
Vagina
CSURP2527
Bacteria
Human
Urine
CSURP2583
Bacteria
Human
Urine
Staphylococcus equorum
CSURP2761
CSURP1315
Bacteria
Bacteria
Human
Human
Pharynx
Feces
Staphylococcus gallinarum
CSURP1456
Bacteria
Human
Feces
Staphylococcus haemolyticus
CSURP0445
122228751H
Bacteria
Human
Blood
CSURP0706
ND
Bacteria
Human
Feces
CSURP2294
Bacteria
Human
Duodenum
CSURP2520
CSURP3075
CSURP0292
Human
Human
Urine
Staphylococcus haemophilus
Bacteria
Bacteria
Bacteria
Animal
CSURP0391
mammouth2
12182435
Bacteria
Human
Feces
Blood
Staphylococcus hominis
CSURP0547
12191050H
Bacteria
Human
Blood
CSURP0842
ND
Bacteria
Human
Feces
CSURP2340
Bacteria
Human
Feces
CSURP2756
CSURP2178
CSURP2355
Human
Human
Pharynx
Bacteria
Bacteria
Bacteria
Human
Vagin
Skin (soap)
Bacteria
Human
Feces
Bacteria
Human
Feces
Staphylococcus hyicus
Staphylococcus intermedius
Staphylococcus intermedius
vagin5
peau11
CSURP1215
CSURP1808
Amaz2
Duodenum
Staphylococcus jettensis
CSURP1059
Bacteria
Human
Feces
Staphylococcus kloosii
CSURP0685
ND
Bacteria
Human
Feces
Staphylococcus kloosii
CSURP0837
ND
Bacteria
Human
Feces
Staphylococcus lugdunensis
CSURP0475
12186577H
Bacteria
Human
Blood
CSURP0744
ND
Bacteria
Human
Feces
CSURP1814
Amaz2
Bacteria
Human
Feces
Staphylococcus massiliensis
CSURP2522
CSURP0023
5402776T
Bacteria
Bacteria
Human
Human
Urine
Brain abscess
Staphylococcus nepalensis
Staphylococcus pasteuri
CSURP2420
CSURP0750
Bacteria
Human
Kw8
Bacteria
Human
Halophylic feces
Feces
CSURP2354
peau10
Bacteria
Human
Skin (soap)
CSURP2670
Bacteria
Environment
Permafrost
CSURP2763
CSURP2267
Bacteria
Bacteria
Human
Human
CSURP1483
Bacteria
Human
Vagin
Feces
Staphylococcus petrasii
Pharynx
Staphylococcus pettenkoferi
CSURP0604
12214073H
Bacteria
Human
Blood
CSURP0804
ND
Bacteria
Human
Feces
CSURP1496
Bacteria
Human
Feces
CSURP1813
Amaz2
Bacteria
Human
Feces
Staphylococcus saprophyticus
CSURP0541
12190593-2H
Bacteria
Human
Blood
CSURP0681
ND
Bacteria
Human
Feces
CSURP2279
mammouth9
Bacteria
Animal
Feces
CSURP2352
Bacteria
Human
CSURP2572
Bacteria
Human
Skin
Halophilic feces
CSURP2650
Bacteria
Human
CSURP2669
Bacteria
Environment
Selles
Permafrost
Staphylococcus schleiferi
CSURP1028
Bacteria
Human
Feces
CSURP1029
Bacteria
Human
Feces
CSURP1833
Amaz1
Bacteria
Human
Feces
Staphylococcus sciuri
CSURP0853
ND
Bacteria
Human
Feces
Staphylococcus simulans
CSURP0653
ND
Bacteria
Unknown
CSURP1831
KWA12
Bacteria
Human
Feces
CSURP1832
OB3
Bacteria
Human
Feces
CSURP1834
Amaz1
Bacteria
Human
Feces
Staphylococcus vitulinus
CSURP1060
Bacteria
Human
Feces
Staphylococcus warneri
CSURP0293
Bacteria
Animal
CSURP0564
mammouth3
12196932H
Bacteria
Human
Feces
Blood
CSURP0758
ND
Bacteria
Human
Feces
Staphylococcus xylosus
CSURP0814
ND
Bacteria
Human
Feces
Staphylococus hominis
Stenotrophomonas acidaminiphila
CSURP2345
peau2
Bacteria
Human
Skin (soap)
CSURP2028
en attente
Bacteria
Human
Feces
Stenotrophomonas acidaminiphila
Bacteria
Human
Feces
Stenotrophomonas maltophilia
CSURP2028
CSURP1004
Bacteria
Human
Feces
Stenotrophomonas maltophilia
CSURP1744
Bacteria
Human
Feces
Stoquefichus jeddahensis
CSURP1494
Bacteria
Human
Feces
Stoquefichus massiliensis
CSURP0202
AP9
Bacteria
Human
Feces
Streptococcus agalactiae
CSURP0536
12190092H
Bacteria
Human
Blood
CSURP1030
Bacteria
Human
Feces
CSURP1826
Bacteria
Human
Feces
CSURP2760
Bacteria
Human
Pharynx
Streptococcus alactolyticus
CSURP2879
CSURP1920
Bacteria
Bacteria
Human
Human
Urine
Feces
Ama 2
Amaz2
Unknown
Streptococcus anginosus
CSURP0593
CSURP1005
CSURP1827
Streptococcus australis
12212312-2H
Bacteria
Human
Blood
Bacteria
Human
Feces
Bacteria
Human
Feces
CSURP1216
Bacteria
Human
Feces
Streptococcus australis
Streptococcus canis
CSURP2752
CSURP1499
Bacteria
Bacteria
Human
Human
Pharynx
Feces
Streptococcus constellatus
CSURP0851
Bacteria
Human
Feces
Streptococcus constellatus
Streptococcus cristatus
CSURP2103
Bacteria
Human
CSURP0644
ND
Bacteria
Human
Pharynx
Feces
CSURP1817
Amaz2
Bacteria
Human
Feces
CSURP1818
Amaz1
Bacteria
Human
Feces
Streptococcus dysgalactiae
CSURP2594
CSURP1819
Amaz2
Bacteria
Bacteria
Human
Human
Pharynx
Feces
CSURP1828
SAN1
Bacteria
Human
Feces
CSURP1835
Amaz1
Bacteria
Human
Feces
CSURP1836
KWA12
Bacteria
Human
Feces
Streptococcus dysgalactiae dysgalactiaCSURP1031
Bacteria
Human
Feces
Streptococcus equinus
CSURP1179
Bacteria
Human
Feces
CSURP1646
OB3
Bacteria
Human
Feces
CSURP1647
KW 12
Bacteria
Human
Feces
CSURP1663
Ama 2
Bacteria
Human
Feces
CSURP1837
Amaz2
Bacteria
Human
Feces
CSURP1838
Kwa12
Bacteria
Human
Feces
Streptococcus galivarius
CSURP0934
Bacteria
Human
Feces
Streptococcus gallolyticus
CSURP0485
12188577H
Bacteria
Human
Blood
CSURP0715
ND
Bacteria
Human
Feces
Amaz2
ND
Streptococcus gordonii
CSURP2212
vagin7
Bacteria
Human
Vagina
CSURP0573
ND
Bacteria
Human
Feces
CSURP1840
Amaz2
Bacteria
Human
Feces
Streptococcus gularis
CSURP2758
CSURP1489
Human
FF10
Bacteria
Bacteria
Pharynx
VNC
Streptococcus haemophilus
CSURP0535
12188839H
Bacteria
Human
Blood
Streptococcus infantarius
Streptococcus intermedius
CSURP2493
CSURP1032
6010988781
Bacteria
Bacteria
Human
Human
Sang
Feces
Streptococcus lactarius
CSURP1296
Bacteria
Human
Feces
Streptococcus lutetiensis
CSURP0543
12190446H
Bacteria
Human
Blood
CSURP0592
12209396H
Bacteria
Human
Blood
CSURP0879
ND
Bacteria
Human
Feces
CSURP1627
Ama 2
Bacteria
Human
Feces
CSURP1638
Niger 6
Bacteria
Human
Feces
CSURP1639
OB6
Bacteria
Human
Feces
CSURP1848
Amaz1
Bacteria
Human
Feces
CSURP1852
Amaz2
Bacteria
Human
Feces
Streptococcus luteus
CSURP1626
OB6
Bacteria
Human
Feces
Streptococcus massiliensis
CSURP0279
4401825T
Bacteria
Human
Human isolate
Streptococcus mitis
CSURP1123
Bacteria
Human
Feces
Streptococcus mitis
CSURP1649
KW 4
Bacteria
Human
Feces
Streptococcus mitis
CSURP1654
Ama 2
Bacteria
Human
Feces
Streptococcus mitis
CSURP1662
OB3
Bacteria
Human
Feces
Streptococcus mitis
Streptococcus mutans
CSURP2585
CSURP0811
ND
Bacteria
Bacteria
Human
Human
Urine
Feces
Streptococcus oralis
CSURP0856
ND
Bacteria
Human
Feces
CSURP1846
OB6
Bacteria
Human
Feces
CSURP1847
Amaz2
Bacteria
Human
Feces
CSURP1850
KWA5
Bacteria
Human
Feces
CSURP1851
KWA12
Bacteria
Human
Feces
CSURP2586
Bacteria
Human
Urine
Streptococcus parasanguinis
CSURP2590
CSURP1845
Amaz2
Bacteria
Bacteria
Human
Human
Pharynx
Feces
CSURP1849
Amaz1
Bacteria
Human
Feces
CSURP2593
Bacteria
Human
Pharynx
CSURP2757
CSURP3032
ND
Bacteria
Bacteria
Human
Human
Pharynx
Feces
Streptococcus peroris
CSURP0885
ND
Bacteria
Human
Feces
Streptococcus pleomorphus
CSURP1217
Bacteria
Human
Feces
Streptococcus pneumoniae
CSURP0635
13002543H
Bacteria
Human
Blood
CSURP0825
ND
Bacteria
Human
Feces
CSURP1844
Amaz2
Bacteria
Human
Feces
Streptococcus pseudoporcinus
CSURP1898
Bacteria
Human
Feces
Streptococcus pyogenes
CSURP0576
12200932H
Bacteria
Human
Blood
Streptococcus pyogenes
CSURP0791
ND
Bacteria
Human
Skin leg infection
Streptococcus salivarius
CSURP0586
12205926-2H
Bacteria
Human
Blood
CSURP0686
ND
Bacteria
Human
Feces
CSURP2591
Bacteria
Human
Pharynx
Streptococcus sanguinis
CSURP2755
CSURP0760
ND
Bacteria
Bacteria
Human
Human
Pharynx
Feces
Streptococcus sanguinis
Streptococcus saprophiticus
CSURP2754
CSURP1660
OB3
Bacteria
Bacteria
Human
Human
Pharynx
Feces
Streptococcus sobrinus
CSURP2033
Bacteria
Human
Feces
Streptococcus thermophilus
CSURP0446
Bacteria
Human
Blood
Streptococcus thermophilus
CSURP1218
Bacteria
Human
Feces
Streptococcus timonensis
Streptococcus vestibularis
CSURP2915
CSURP1454
Marseille-P2915T
Bacteria
Human
Bacteria
Human
Duodenum
Feces
Streptococcus warneri
CSURP1829
Amaz1
Bacteria
Human
Feces
Streptococcus warneri
CSURP1830
Amaz2
Bacteria
Human
Feces
Streptomonas parasanguinis
CSURP1861
Marasme
Bacteria
Human
Feces
Streptomonas pneumoniae
CSURP1843
Bacteria
Human
Feces
Streptomyces algeriensis
CSURP1096
LL03 DSM 42127
Bacteria
Streptomyces algeriensis
CSURP1098
LL03 DSM 42112
Bacteria
Streptomyces cacaoi
CSURP1297
Bacteria
Human
Feces
Streptomyces koyangensis
CSURP0134
Bacteria
Human
Feces
Streptomyces massiliensis
CSURP0203
Bacteria
Human
Feces
Streptomyces massiliensis
CSURP1362
Bacteria
Human
Feces
Streptomyces rochei
CSURP1099
Bacteria
Human
Feces
Streptomyces specialis
CSURP2100
Lotfi
Bacteria
Streptomyces tarefmassiliensis
CSURP1095
LL02 DSM 42138
Bacteria
Streptomyces thermovulgaris
CSURP1100
Bacteria
Human
Feces
Sulfareapirillum deleyianum
CSURP1479
Bacteria
Human
Feces
Sutterela wadworthensis
CSURP2925
CSURP2241
Bacteria
Bacteria
Human
Human
Urine
CSURP1463
Bacteria
Human
Bacteria
Animal
Bacteria
Human
Feces
Feces
Bacteria
Human
Feces
Sutterella wadsworthensis
Suturella wadsworthensis
Terisporobacter glycolicus
Terribacillus halobacillus
CSURP0331
CSURP1904
Terribacillus halophilus
CSURP1239
12185653H
AP10 T
mammouth8
Feces
Feces
Terribacillus halophilus
CSURP2465
Bacteria
Human
Terrisporobacter glycolicus
Terrisporobacter mayombei
CSURP2569
CSURP1899
Bacteria
Bacteria
Human
Human
Tessaracoccus massiliensis
CSURP1301
Bacteria
Human
Feces
Tetragenococcus koreensis
CSURP2168
Bacteria
Human
Feces
Thalassobacillus massiliensis
CSURP0976
Bacteria
Human
Feces
Thermoactinomyces sanguinis
CSURP1936
Bacteria
Human
Feces
Thermococcus prieurii sp nov
CSURP0566
Bio pl 0405IT2
Bacteria
Environment Environmental isolate
Timonella senegalensis
CSURP0167
JC301 T
Bacteria
Human
Feces
Tissierella praeacuta
CSURP0914
ND
Bacteria
Human
Feces
Trichospora inkin
CSURP1933
Bacteria
Human
Feces
Trichosporon asahii
CSURP2158
Fungi
Human
Feces
Trichosporon asahii
Tropheryma whipplei
CSURP2446
Human
Human
Feces
Cardiac valve
Tropheryma whipplei
CSURT0002
Twist-Marseille
Slow2
Fungi
Bacteria
Bacteria
Human
Duodenal biopsy
Tropheryma whipplei
CSURT0003
Endo5
Bacteria
Human
Blood
Tropheryma whipplei
CSURT0004
Neuro1
Bacteria
Human
Cerebro-spinal fluid
Tropheryma whipplei
CSURT0006
Endo7
Bacteria
Human
Cardiac valve
Tropheryma whipplei
CSURT0007
Dig7
Bacteria
Human
Blood
Tropheryma whipplei
CSURT0008
Dig9
Bacteria
Human
Blood
Tropheryma whipplei
CSURT0009
Dig10
Bacteria
Human
Cerebro-spinal fluid
Tropheryma whipplei
CSURT0031
TW ENDO 7B
Bacteria
Human
Heparined Blood
Trueperella bernardiae
CSURP0769
ND
Bacteria
Human
Bone biopsy
Trueperella bernardiae
Tsukamurella paurometabola
CSURP2563
CSURP0180
1534 T
Bacteria
Bacteria
Human
Human
Vagina
Sputum
Tsukamurella paurometabola
CSURP1398
Bacteria
Human
Feces
CSURT0001
SIT7
TM-1 T
T
Halophylic feces
Selles
Feces
Turicella otitidis
CSURP0771
ND
Bacteria
Human
Ear
Turicibacter sanguinis
CSURP0700
ND
Bacteria
Human
Feces
Ureibacillus suwonensis
CSURP0847
ND
Bacteria
Human
Feces
Urinacoccus massiliensis
CSURP1992
Bacteria
Human
Feces
Urinainfantis massiliensis
CSURP2140
Bacteria
Human
Urine
Urinainfantis massiliensis
CSURP2890
Bacteria
Human
Pharynx
Vaginella massiliensis
Vagococcus fluvialis
CSURP2517
CSURP1262
Bacteria
Bacteria
Human
Human
Vagococcus fluvialis
Vagococcus lutrae
CSURP2697
CSURP1451
Bacteria
Bacteria
Human
Human
Vagin
Feces
Selles
Vagococcus penaei
CSURP1469
Bacteria
Human
Feces
Varibaculum cambriense
Bacteria
Bacteria
Human
Human
Urine
CSURP2867
CSURP2227
CSURP2519
Varibaculum massiliense
Veillonella atypica
CSURP2802
CSURP1086
Marseille-P2802T
Bacteria
Bacteria
Human
Human
Bacteria
Human
Urine
Feces
Veillonella atypica
Veillonella dispar
CSURP2330
vagin 24
Bacteria
Human
Vagina
CSURP0940
Bacteria
Human
Feces
Veillonella parvula
CSURP1033
Bacteria
Human
Feces
Veillonella parvula
CSURP2874
Bacteria
Human
Urine
Veillonella parvula
CSURP2891
CSURP2816
CSURP1989
Human
Human
Pharynx
Veillonella ratti
Veillonella rattii
Bacteria
Bacteria
Bacteria
Human
Urine
Feces
Vibrio cholerae
CSURP0238
7402594
Bacteria
Human
Blood
Vibrio cholerae
CSURP2057
5060309574
Bacteria
Vibrio cholerae Guinée
CSURP0318
12139633
Bacteria
Human
Feces
Marseille-P2517T
Feces
Selles
Vagin
Vibrio parahaemolyticus
CSURP1442
Bacteria
Human
Feces
Virgibacillus dokdonensis
CSURP2545
Bacteria
Human
Halophilic feces
Virgibacillus dokdonensis
Virgibacillus halodenitrificans
CSURP2546
CSURP1093
Human
Halophilic feces
S3
Bacteria
Bacteria
Virgibacillus massiliensis
CSURP0971
VM-5 T
Bacteria
Human
Feces
CSURP2480
Marseille-P2480T
Bacteria
Human
Halophilic feces
Virgibacillus pantothenticus
CSURP2480
CSURP0421
12112923H
Bacteria
Bacteria
Human
Human
Selles halophiles
Blood
Virgibacillus proomii
CSURP0864
ND
Bacteria
Human
Feces
CSURP1094
S3
Bacteria
Human
Feces
Virgibacillus senegalensis
CSURP2570
CSURP1101
Human
Human
Selles
Sk-1
Bacteria
Bacteria
Vitreoscilla massiliensis
CSURP2036
Bacteria
Human
Feces
Wautersiella falsenii
CSURP0843
SN6
ND
Bacteria
Human
Feces
Weeksella massiliensis
CSURP0860
FF8 T
Bacteria
ND
Weeksella virosa
CSURP0708
ND
Bacteria
Human
Feces
Weissella cibaria
CSURP1839
Amaz2
Bacteria
Human
Weissella paramesenteroides
CSURP2716
Bacteria
Human
Feces
Selles
Weissella viridescens
Xanthomonas massiliensis
CSURP2541
CSURP2129
Bacteria
Bacteria
Human
Human
Selles
Yersinia bercovieri
CSURP1905
Bacteria
Human
Feces
Yersinia enterocolitica
CSURP0840
ND
Bacteria
Human
Feces
Yersinia pestis
CSURP1940
Algeria 3
Bacteria
Zimmermanella bifida
CSURP1251
Human
Feces
SN6
Bacteria
Feces
ND
Feces

SPECIES CSUR NUMBER STRAIN ORGANISME ORIGIN TYPE OF

Transcription

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