Articles dans des revues avec comité de lecture (ACL
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Articles dans des revues avec comité de lecture (ACL
Articles dans des revues avec comité de lecture (ACL) Equipe Mécanismes à l’Origine de la Biodiversité (Responsable : [email protected]) 2005 P1. P2. P3. P4. P5. P6. P7. P8. P9. Brugiere D., Fleury M.C., Colyn M. 2005. Structure of the squirrel community in the Forêt des Abeilles, central Gabon: Rediscovery and revalidation of Funisciurus duchaillui Sanborn 1953. Mammalia, 69(2), 223-231. Lecompte E., Nicolas V., Colyn M., Denys C., Volobouev V. 2005. Description of the karyotype of Heimyscus fumosus and of several other murids from the Mount Doudou area (Gabon). Belgian Journal of Zoology, 135(1), 21-25. Nicolas J., Durand P., Ranchy G., Tempel S., Valin A.S. 2005. Suffix-Tree Analyser (STAN): looking for nucleotidic and peptidic patterns in genomes. Bioinformatics, 21(24), 4408-4410. Nicolas V., Barriere P., Colyn M. 2005. Seasonal variation in population and community structure of Shrews in a tropical forest of Gabon. Journal of Tropical Ecology, 21(2), 161-169. Nicolas V., Verheyen E., Verheyen W., Dillen M., Akpatou B., Dudu A., Wendelen W., Colyn M. 2005. A taxonomic revision of the African lowland rainforest species of the genus Praomys from Central Africa (Rodentia, Muridae) based on molecular and craniometric data. Zoological Journal of the Linnean Society, 145(4), 539-553. Nicolas V., Verheyen E., Verheyen W., Hulselmans J., Dillen M., Akpatou B., Dudu A., Wendelen W., Colyn M. 2005. Systematics of African lowland rainforest Praomys (Rodentia, Muridae) based on molecular and craniometrical data. Zoological Journal of the Linnean Society, 145(4), 539-553. Refoufi A., Esnault M.A., Levasseur J.E. 2005. Characterization of a novel hybrid 9-ploid (2n=63) with four genomes in Elytrigia complex (Poaceae). Botanical Journal of the Linnean Society, 147(4), 501-508. Salmon A., Ainouche M.L., Wendel J.F. 2005. Genetic and epigenetic consequences of recent hybridization and polyploidy in Spartina (Poaceae). Molecular Ecology, 14(4), 11631175. HEULIN (B.), STEWART (J.R.), SURGET-GROBA (Y.), BELLAUD (P.), JOUAN (F.), LANCIEN (G.), DEUNFF (J.), 2005. Development of the uterine shell glands during the preovulatory and early gestation periods in oviparous and viviparous Lacerta vivipara. Journal of Morphology, 93, 266-280. 2006 P1. P2. P3. P4. P5. P6. Barriere P., Hutterer R., Nicolas V., Querouil S., Colyn M. 2006. Investigating the role of historically isolated gallery forests outside the Congolese forest block as a refuge for African forest shrews. Belgian Journal of Zoology, 135, 27-37. Charrier M., Fonty G., Gaillard-Martinie B., Ainouche K., Andant G. 2006. Isolation and characterization of fermentative bacteria from the intestine of two edible snails, Helix pomatia and Cantareus aspersus (Gastropoda: Pulmonata). Biological Research, 00, 00-00. Chenal C., Legue F., Nourgalieva K. 2006. Delayed effects of low level acute irradiation and chronic environmental radioactive contamination on DNA lymphocytes of people living in Dolon, a settlement located in the vicinity of the Semipalatinsk nuclear test site (Kazakhstan). The Science of the Total Environment, 369(1-3), 91-98. Couee I., Sulmon C., Gouesbet G., El Amrani A. 2006. Involvement of soluble sugars in reactive oxygen species balance and responses to oxidative stress in plants. Journal of Experimental Botany, 57(3), 449-459. Denys C., Colyn M., Nicolas V. 2006. First record of the Dollman’s tree mouse (Prionomys batesi; Mammalia: Nesomyidae) in the republic of Congo and additional description of this rare Central African rodent. Zootaxa, 1318, 59-68. Durand P., Mahe F., Valin A.S., Nicolas J. 2006. Browsing repeats in genomes : Pygram and an application to non-coding region analysis. BMC Bioinformatics, 7, 477 (17p). P7. P8. P9. P10. P11. P12. P13. P14. P15. P16. P17. Mukinzi I., Kadange N., Bapeamoni A., Amundala D., Gembu T., Kaswera K., Danadu M., Gambalemoke M., Katuala P.G.B., Dudu A., Colyn M., Hutterer R. 2006. Preliminary data collected on biodiversity of rodents and insectivores (Mammalia) in the periphery of Kisangani (D.R. Congo). Belgian Journal of Zoology, 00, 00-00. Nicolas V., Colyn M. 2006. Relative efficiency of three types of small mammal traps in an African rainforest. Belgian Journal of Zoology, 136(1), 107-111. Nicolas V., Querouil S., Verheyen E., Verheyen W., Mboumba J.F., Dillen M., Colyn M. 2006. Mitochondrial phylogeny of African wood mice, genus Hylomyscus (Rodentia, Muridae): Implications for their taxonomy and biogeography. Molecular and Phylogenetics Evolution, 38(3), 779-793. Nicolas V., Colyn M. 2006. Swimming ability in 5 species of African rainforest murid rodents in relation to their habitat preferences. Zoological Studies, 45(2), 264-268. Pourtau N., Jennings R., Pelzer E., Pallas J., Wingler A. 2006. Effect of sugar-induced senescence on gene expression and implications for the regulation of senescence in Arabidopsis. Planta, 224(3), 556-568. Refoufi A., Esnault M.A. 2006. Genetic diversity and population structure of Elytrigia pycnantha (Godr.) (Triticeae) in Mont Saint Michel bay using microsatellites markers. Plant Biology, 8(2), 234-242. Sulmon C., Gouesbet G., El Amrani A., Couee I. 2006. Sucrose-induced tolerance to the herbicide atrazine in Arabidopsis seedlings involves activation of oxidative and xenobiotic stress responses. Plant Cell Reports, 25, 489-498. Sulmon C., Gouesbet G., El Amrani A., Couee I. 2006. Involvement of the ethylenesignalling pathway in sugar-induced tolerance to the herbicide atrazine in Arabidopsis thaliana seedlings. Journal of Plant Physiology, 164:1083-1092. Sulmon C., Gouesbet G., Couee I., Cabello-Hurtado F., Cavalier A., Penno C., Zaka R., Bechtold N., Thomas D., El Amrani A., 2006. The pleiotropic Arabidopsis frd mutation with altered coordination of chloroplast biogenesis, cell size and differentiation, organ size and number. Gene, 382, 88-99. Tempel S., Giraud M., Lavenier D., Lerman I.C., Valin A.S., Couee I., El Amrani A., Nicolas J. 2006. Domain organization within repeated DNA sequences: application to the study of a family of transposable elements. Bioinformatics, 22(16), 1948-1954. Tipirdamaz R., Gagneul D., Duhaze C., Ainouche A., Monnier C., Ozkum D., Larher F. 2006. Clustering of halophytes from an inland salt marsh in Turkey according to their ability to accumulate sodium and nitrogenous osmolytes. Environmental and Experimental Botany, 57(1-2), 139-153. 2007 P1. Akpatou B.K., Nicolas V., Pires D., N’Goran E., Colyn M. 2007. Morphometric differentiation between two murid rodents, Praomys tullbergi (Thomas, 1894) and Praomys rostratus (Miller, 1900), in west Africa. Zootaxa, 1607, 21-34. P2. Amirouche N., Misset M.T. 2007. Morphological variation and distribution of cytotype in the diploid-tetraploid complex of the genus Dactylis L. (Poaceae) from Algeria. Plant Systematics and Evolution, 264(3-4), 157-174. P3. Deunff J., Whittaker J.O., Kurta A. 2007. Description of Cameronieta torrei dusbabeki (Acari: Mesostigmata: Spinturnicidae), new subspecies with nymphs, parasitizing Pteronotus quadridens fuliginosus (Chiroptera: Mormoopidae) from Puerto Rico. Journal of Medical Entomology, 44(2), 179-185. P4. Fortune P.M., Schierenbeck K.A., Ainouche A.K, Jacquemin J., Wendel J.F., Ainouche M.L. 2007. Evolutionary dynamics of Waxy and the origin of hexaploid Spartina species (Poaceae). Molecular Phylogenetics and Evolution, 43(3), 1040-1055. P5. Gagneul D., Ainouche A., Duhaze C., Le Caherec L., Leport L., Larher F., Bouchereau A. 2007. A reassessment of the function of the so-called compatible solutes in the halophytic Plumbaginaceae Limonium latifolium. Plant Physiology, 144(3), 1598-1611. P6. Kolliker M., Vancassel M. 2007. Maternal attendance and the maintenance of family groups in common earwigs (Forficula auricularia): a field experiment. Ecological Entomology, 32, 24-27. P7. Masclaux-Daubresse C., Purdy S., Lemaitre T., Pourtau N., Taconnat L., Renou J.P., Wingler A. 2007. Genetic variation suggests interaction between cold acclimation and metabolic regulation of Leaf senescence. Plant Physiology, 143(1), 434-446. P8. Murakeozy E.P., Ainouche A., Deslandes E., Meudec A., Poupart N. 2007. Phylogenetic relationships and genetic diversity of the Salicornieae (Chenopodiaceae) native to the Atlantic coasts of France. Plant Systematics and Evolution, 264(3-4), 217. P9. Nicolas V., Colyn M. 2007. Efficiency of fluorescent powder tracking for studying use of space by small mammals in an African rainforest. African Journal of Ecology, 45(4), 577-580. P10. Ramel F., Sulmon C., Cabello-Hurtado F., Taconnat L., Martin-Magniette M.L., Renou J.P., El Amrani A., Couee I., Gouesbet G. 2007. Genome-wide interacting effects of sucrose and herbicide-mediated stress in Arabidopsis thaliana: novel insights into atrazine toxicity and sucrose-induced tolerance. BMC Genomics, 8, 450. P11. Sulmon C., Gouesbet G., Binet F., Martin-Laurent F., El Amrani A., Couee I. 2007. Sucrose amendment enhances phytoaccumulation of the herbicide atrazine in Arabidopsis thaliana. Environmental Pollution, 145(2), 507-515. P12. Sulmon C., Gouesbet G., El Amrani A., Couee I. 2007. Involvement of the ethylene-signalling pathway in sugar-induced tolerance to the herbicide atrazine in Arabidopsis thaliana seedlings. Journal of Plant Physiology, 164(8), 1083-1092. P13. Tempel S., Nicolas J., El Amrani A., Couee I. 2007. Model-based identification of Helitrons results in a new classification of their families in Arabidopsis thaliana. Gene, 403(1-2), 18-28. 2008 Leblanc A, Renault H, Lecourt J, Etienne P, Deleu C, Le Deunff E (2008) Elongation Changes of Exploratory and Root Hair Systems Induced by Aminocyclopropane Carboxylic Acid and Aminoethoxyvinylglycine Affect Nitrate Uptake and BnNrt2.1 and BnNrt1.1 Transporter Gene Expression in Oilseed Rape. Plant Physiology, 146: 19281940 P14. Dubey S., Salamin N., Ruedi M., Barriere P., Colyn M., Vogel P. 2008. Biogeographic origin and radiation of the Old World crocidurine shrews (Mammalia : Soricidae) inferred from mitochondrial and nuclear genes. Molecular Phylogenetics and Evolution, 48(3), 953-963. P15. Fortune P.M., Schierenbeck K., Ayres D., Bortolus A., Catrice O., Brown S., Ainouche M.L. 2008. The enigmatic invasive Spartina densiflora: A history of hybridizations in a polyploidy context. Molecular Ecology, 17(19), 4304-4316. P16. Fortune P., Pourtau N., Viron N., Ainouche M. 2008. Molecular phylogeny and reticulate origins of the polyploid Bromus species from section Genea (Poaceae). American Journal of Botany, 95, 4, 454-464. P17. Gambalemoke M., Mukinzi I., Amundala D., Gembu T., Kaswera K., Katuala G.B., Dudu A., Barriere P., Colyn M., Hutterer R., Kennis J., Leirs H., Vanlinden B., Verheyen E. 2008. Microgeographical distribution of shrews (Mammalia, Soricidae) in the Congo River basin (Kisangani, D.R. Congo). Mammalia, 72(3), 213-222. P18. Heulin B., Garnier D., Surget-Groba Y., Deunff J. 2008. Plasma levels of estradiol during vitellogenesis and early gestation in oviparous and viviparous Lacerta (Zootoca) vivipara. Amphibia-Reptilia, 29(1), 135-139. P19. Kouassi S.K., Nicolas V., Aniskine V., Lalis A. Cruaud C., Couloux A., Colyn M., Dosso M., Koivogui L., Verheyen E., Akoua-Koffi C., Denys C. 2008. Taxonomy and biogeography of the African pygmy mice, subgenus Nannomys (Rodentia, Murinae, Mus) in Ivory Coast and Guinea (west Africa). Mammalia, 72(3), 237-252. P20. Nicolas V., Wendelen W., Barrière P., Dudu A, Colyn M. 2008. Morphometric variation in Hylomyscus alleni and H. stella (Rodentia: Muridae), and description of a new species. Journal of Mammalogy, 89(1), 222-231. P21. Nicolas V., Mboumba J.F., Verheyen E., Denys C., Lecompte E., Olayemi A., Missoup A.D., Katuala P., Colyn M. 2008. Phylogeographic structure and regional history of Lemniscomys striatus (Rodentia: Muridae) in tropical Africa. Journal of Biogeography, 35(11), 2074-2089. P22. Nicolas V., Bryja J., Akpatou B., Konecny A., Lecompte E., Colyn M., Lalis A., Couloux A., Denys C., Granjon L. 2008. Comparative phylogeography of two sibling species of forestdwelling rodent (Praomys rostratus and P. tullbergi) in West Africa: different reactions to past forest fragmentation. Molecular Ecology, 17(23), 5118-5134. P23. Refoufi A., Esnault M.A. 2008. Population genetic diversity in the polyploid complex of wheatgrasses using isoenzyme and RAPD data. Biologia Plantarum, 52(3), 543-547. 2009 P1. Renault H, Roussel V, El Amrani A, Arzel M, Renault D, Bouchereau A, Deleu C (2009) The Arabidopsis pop2-1 mutant reveals the involvement of GABA transaminase in salt stress tolerance. BMC Plant Biology (sous presse). P2. Ainouche M.L., Fortune P., Salmon A., Parisod C., Grandbastien M.A., Fukunaga K., Ricou M., Misset M.T. 2009. Hybridization, polyploidy and invasion: lessons from Spartina (Poaceae). Biological Invasions, 11(5), 1159-1173. P3. Mukinzi I., Kadange N., Bapeamoni A., Amundala D., Gembu T., Kaswera K., Danadu M., Gambalemoke M., Katuala P.G.B., Dudu A., Colyn M., Hutterer R. 2006. Preliminary data collected on biodiversity of rodents and insectivores (Mammalia) in the periphery of Kisangani (D.R. Congo). Belgian Journal of Zoology, 00, 00-00 P4. Nicolas V., Barriere P., Tapiero A., Colyn M. 2009. Shrew species diversity and abundance in Ziama biosphere reserve, Guinea: comparison among primary forest, degraded forest and restoration plots. Biodiversity and Conservation, 18(8), 2043-2061. P5. Rousseau-Gueutin M., Gaston A., Ainouche A., Ainouche M.L., Olbricht K., Staudt G., Richard L., Denoyes-Rothan B. 2009. Tracking the evolutionary history of polyploidy in Fragaria L. (strawberry): new insights from phylogenetic analyses of low-copy nuclear genes. Molecular Phylogenetics and Evolution, 51(3), 515-530. P6. Parisod C. Salmon A., Zerjal T., tenaillon M-A, M-A Grandbastien, M-A, Ainouche M. 2009. Rapid structural and epigenetic reorganization near Transposable Elements in hybrid and allopolyploid genomes in Spartina. New Phytologist, 184, 1003-1015 P7. Salmon A. et Ainouche M. 2009. Polyploidy and DNA methylation : New tools available. Molecular Ecology. Perspective. Doi:10.1111/j.1365-294x.2009.04461.x Brevets 1- El Amrani Abdelhak, Christophe Biteau and Francisco Cabello-Hurtado (2008) international Patent n° PCT/EP2008/066176 2- El Amrani A, Biteau C et Cabello-Hurtado F. (2007) Procédé d’amélioration de la résistance des végétaux au stress et produits correspondants, Brevet Français, FR-07 57372 3- Sulmon C, Gouesbet G, Couée I, El Amrani A (2006) Method for improving the phytoremediation of polluted sites by providing plants with exogenous carbohydrates. USA patent, US2007093388 4- Sulmon C, Gouesbet G, Couée I, El Amrani A (2005) "Procédé d'amélioration de la phytoremédiation de sites pollués par l'apport aux plantes de glucides exogènes", Bulletin Officiel de la Propriété Industrielle 11, n° 2 859 600 5- Sulmon C, Gouesbet G, Couée I, El Amrani A International Application (Patent Cooperation Treaty), 2005, PCT/FR04/02294. Articles dans des revues sans comité de lecture AINOUCHE M. 2007 - Effet de la polyploïdie sur la biodiversité et l’évolution du génome des plantes. Publications de l’Institut Français de la Biodiversité. 5e Journées de l’IFB, Tours : Biodiversité,14-19. AINOUCHE M. 2008 – Histoire évolutive et conquêtes de la spartine anglaise : contexte génomique de la naissance d’une espèce. Aestuaria, 13, 35-52. El Amrani A. et Cabello-Hurtado C. (2009) La phytoremédiation : une nouvelle stratégie qui vise à utiliser les plantes pour dépolluer l’environnement, PHM, 514:9-11 El Amrani A. et Cabello-Hurtado C. (2008) La phytoremédiation s’attaque aux sols gorgés de polluants, lesEchos, Rubrique environnement. pp : 22. Article publié le 04 avril 2008 Cabello-Hurtado C. et El Amrani A. (2007) La phytoremédiation : une découverte en biotechnologie environnementale. Bretagne 6 :76-79 El Amrani A. et Cabello-Hurtado C. (2005) Des chercheurs rennais boostent la capacité des plantes à décontaminer les sols. Rennes Atalante Info, Edito : Technopoles de compétitivité, 4ème trimestre 2005, pp5 Ouvrages scientifiques (ou chapitres) (OS) SCHIERENBECK K. and AINOUCHE M. 2006 - The role of evolutionary genetics in the study of plant invasions. In Conceptual Ecology and Invasion Biology: Reciprocal approaches to Nature. M. Cadotte, S.M. Mc Mahon & T. Fukami Eds, 193-221. II.2.8 Direction d'ouvrages (DO) HDR SOUTENUES THESES SOUTENUES 2007 Fortune Philippe 2007. Phylogénie et dynamique des gènes dupliqués chez les plantes polyploides : Evolution dans les genres Bromus L. et Spartina Schreb (Poaceae). Thèse de doctorat de l’Université de Rennes I. 189 p. 27/06/2007. Mboumba Jean-Francois 2007. Histoire des savannes incluses du Mayombe. Phylogéographie comparée de trois Muridés africains (Rodentia, Muroidea) : le cas du Gabon. Thèse de doctorat de l’Université de Rennes I. 18/07/2007. Tempel Sébastien 2007. Dynamique des hélitrons dans le génome d’Arabidopsis thaliana : Développement de nouvelles stratégies d’analyse des éléments transposables. Thèse de doctorat de l’Université de Rennes I. 18/06/2007. 2008 2009 Hugues Renault 2009. Génomique fonctionnelle du métabolisme du GABA chez Arabidopsis thaliana : contribution à l’étude des réponses au stress salin. Thése de doctorat de l’Université de Rennes 1, 11/12/2009 Mahé Frédéric 2009. Phylogénie, Eléments transposables et Evolution de la taille des génomes chez les lupins. Thèse de doctorat de l’Université de Rennes I. 17/12/2009. Ramel Fanny 2009. Implication des sucres solubles dans les réponses aux stress xénobiotique et oxydatif chez Arabidopsis thaliana. Thèse de doctorat de l’Université de Rennes I. 20/01/2009.