26es Journées du Groupe Français des Glycosciences Livre des

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26es Journées du Groupe Français des Glycosciences Livre des
Organisatrice : Prof. Christelle Breton
26es Journées du Groupe
Français des Glycosciences
Aussois, 23-27 mai 2016
Livre des résumés
Sommaire
Le GFG 2016 remercie les organismes suivants pour leur soutien financier ou matériel
partenaires académiques
BIENVENUE À AUSSOIS............................................................... 1
COMITÉ D’ORGANISATION ....................................................... 1
COMITÉ SCIENTIFIQUE NATIONAL......................................... 1
COMITÉ SCIENTIFIQUE LOCAL .................................................. 1
PROGRAMME................................................................................. 2
COMMUNICATIONS INVITÉES (CI)........................................ 5
COMMUNICATIONS ORALES (CO + DUO) .........................19
partenaires industriels
POSTERS .........................................................................................31
LISTE DES POSTERS .....................................................................52
LISTE DES PARTICIPANTS .........................................................54
Bienvenue à Aussois
Comité D’organisation
Dr Sylvie Armand, Pr Christelle Breton, Michèle Carret, Sandrine Coindet & Martine Morales, Cermav
Chers participants, chers membres du GFG, chers amis,
Vous m’avez fait l’honneur, il y a 4 ans, en me nommant Présidente du GFG pour la période 2015es
2016, de me confier l’organisation des 26 Journées du GFG. Nous y sommes. Je suis
particulièrement heureuse de vous accueillir, pour cette nouvelle édition, au Centre Paul Langevin à
Aussois, village savoyard aux portes du Parc National de la Vanoise en Maurienne.
Comité scientifique national
Comme les précédentes éditions, ces Journées seront l’occasion de rassembler chimistes,
polyméristes, structuralistes, biochimistes et biologistes du domaine riche et fascinant des
Glycosciences. Ces rencontres bisannuelles sont un moment fort du GFG : elles permettent de
présenter les dernières avancées, favorisent les échanges scientifiques et enrichissent nos
connaissances. Elles sont aussi l’occasion de retrouver des collègues, de nouer de nouvelles amitiés
et collaborations et de partager des moments de convivialité.
Ces journées seront aussi l’occasion d’attribuer le prix du GFG2016 et le prix Bernard Fournet- André
Verbert et de tenir l’Assemblée Générale des membres du GFG. Au cours de cette AG, les membres
du bureau actuel présenteront le bilan des actions de ces deux dernières années. Vous aurez droit,
en avant-première, à la présentation du nouveau site web du GFG ainsi qu’à une proposition de logo.
Nous élirons également le prochain vice-président Biologiste qui aura en charge l’organisation de la
e
28 édition de ces journées en 2020. L’Assemblée générale des membres est un moment unique
pour faire entendre votre point de vue. Vous êtes tous invités à prendre part à la réflexion sur les
actions futures à mener pour accroitre la visibilité des Glycosciences en France et dynamiser la vie
du GFG.
Pr Christelle Breton
Cermav, Grenoble
Pr Arnaud Tatibouët
ICOA, Orléans
Pr Vincent Ferrières
ENSC, Rennes
Pr David Bonnaffé
ICMMO, Orsay
Pr Philippe Delannoy
UGSF, Lille
Pr. Florence Djedaïni-Pilard
LG, Amiens
Pr Pierre Monsan
INSA, Toulouse
Dr Serge Pérez
DPM, Grenoble
Dr Catherine Ronin
SiaMed’Xpress
Comité scientifique local
L’organisation d’un congrès est avant tout un travail d’équipe. Je tiens à remercier très sincèrement
les membres du comité scientifique local et du comité scientifique national du GFG qui ont participé à
l’élaboration du programme. Nous espérons que ce programme sera à la hauteur de vos attentes.
J’adresse une mention spéciale à Sylvie Armand (secrétaire du GFG) et Michèle Carret pour leur
aide très précieuse dans l’organisation pratique de ce congrès et à Martine Morales et Sandrine
Coindet pour les aspects administratifs. Merci à Kawthar Bouchemal pour le logo du GFG2016 et à
Michèle Carret pour le design du site web du colloque. Arnaud, Emeline, Emilie, Milène et Valérie
vous accueilleront et vous guideront pendant cette semaine. Merci à eux. Merci également aux
partenaires académiques et privés pour leur soutien financier.
Je n’oublie pas non plus Vincent Ferrières, notre trésorier du GFG, et Arnaud Tatibouët, notre VicePrésident chimiste, pour leurs actions au sein de l’association et Philippe Delannoy pour son aide
dans l’attribution des prix du GFG.
Tous les membres du comité d’organisation vous souhaitent un très bon congrès et un séjour
agréable à Aussois. Nous espérons que le cadre sera propice aux échanges et que vous apprécierez
la beauté et la quiétude du site.
Pr Christelle Breton
Cermav, Grenoble
Dr Sylvie Armand
Cermav, Grenoble
Pr Rachel Auzély
Cermav, Grenoble
Dr Sébastien Fort
Cermav, Grenoble
Dr Sami Halila
Cermav, Grenoble
Dr William Helbert
Cermav, Grenoble
Dr Anne Imberty
Cermav, Grenoble
Dr Hugues Lortat Jacob
IBS, Grenoble
Dr Serge Pérez
DPM, Grenole
Dr Jean-Luc Putaux
Bien amicalement à tous,
Christelle
1
Cermav, Grenoble
PROGRAMME
lundi 23 mai
17h30
CEREMONIE D’OUVERTURE
Session 1
17h45
CI-01
modérateur
Ph. Delannoy
18h15
DUO-01
08h45
Jacques Le Pendu
Solange Morera
& Yves Queneau
Glycans in enteric virus infection
CI-02
François Foulquier
Congenital disorders of glycosylation and Golgi homeostasis: an unexpected link !
09h15
CO-01
Steffi Baldini
Regulation of hepatic Fatty Acid Synthase properties by O-GlcNAcylation in vivo and ex vivo
09h30
CO-02
Giuliano Cutolo
The MG system as a ligation tool in biological chemistry
09h45
CI-03
Frédéric Friscourt
Novel cyclooctyne-based probes with exciting physical properties for the bioorthogonal labeling of glycoconjugates
A key pyranose-2-phosphate motif is responsible for both antibiotic import and quorum-sensing regulation in Agrobacterium tumefaciens
mardi 24 mai
Session 2
modérateurs
J. Le Pendu
V. Ferrières
10h15 - pause
Session 3
modérateurs
J. Bouckaert
A. Tatibouët
10h45
CI-04
Cyrille Grandjean
Galectins, key players of homeostasis
11h15
CO-03
Annabelle Varrot
Tectonin2 from Laccaria bicolor is designed for methylated glycans recognition
11h30
CO-04
Sébastien Gouin
Modulateurs multimériques de l’activité des glycosidases
11h45
CI-05
Olivier Renaudet
Chemoselective ligations: highly efficient strategies for the construction of biologically active multivalent glycoconjugates
12h15 - déjeuner
Session 4
modérateurs
R. Auzély
C. Tellier
14h30
CI-06
Claire Moulis
Discovery and applications of new sucrose-active enzymes from GH70 family
15h00
CO-05
Claire Dumon
Exploration of the lignocellulolytic potential of invertebrate microbiome
15h15
CO-06
Mehdi Omri
Selective oxidation of free carbohydrates to corresponding aldonates using gold supported catalysts under microwave-irradiation
15h30
CI-07
Françoise Quignard
Polysaccharides: from hydrocolloids to textured materials
16h00 : pause
Session 5
16h30
CI-08
Nathalie Bourgougnon
modérateurs
C. Boisset
Y. Queneau
17h00
CO-07
Agata Zykwinska
Conventional and sustainable bioprocesses for the extraction of antiherpetic oligo and polysaccharides from the invasive Solieria chordalis
(Rhodophyta, Gigartinales)
Assembly of a marine exopolysaccharide into microgels for protein delivery applications
17h15
CO-08
Véronique Bonnet
Preparation of new nanovectors by synthesis of glycerolipidyl and phosphoramidyl-cyclodextrins
17h30
SESSION POSTERS 1 (n° impairs)
2
mercredi 25 mai
Session 6
modérateurs
T. Lefebvre
J-B. Behr
08h45
CI-09
Jérôme Nigou
09h15
CO-09
Emeline Richard
Molecular bases of Mycobacterium tuberculosis recognition by C-type lectins: from the modulation of innate immune response to the
design of therapeutic molecules
Bacterial synthesis of polysialic acid lactosides in recombinant Escherichia coli K-12
09h30
CO-10
Joanne Xie
Synthesis and property of N-oxyamide-linked glycoconjugates
09h45
CI-10
Laurence Mulard
Synthetic carbohydrate-based vaccines against shigellosis: from concept to clinic … and more
10h15 : pause
Session 7
modérateurs
N. Aghajari
S. Fort
10h45
CI-11
Marcelo E. Guerin
11h15
CO-11
Thomas Hurtaux
11h30
CO-12
Régis Fauré
Membrane enzymes: the structural basis of phosphatidylinositol mannosides biosynthesis in mycobacteria
Activity and structural characterization of Candida albicans β-1,2 mannosyltransferase CaBmt3 involved in the elongation of the cell-wall
phosphopeptidomannan
How to tip the balance from hydrolysis toward transglycosylation: molecular basis in retaining GHs
11h45
CI-12
Yves Blériot
The glycosyl cation: from observation to exploitation
12h15 : déjeuner - après-midi libre
jeudi 26 mai
Session 8
modérateurs
A. Varrot
R. Vivès
08h45
CI-13
Muriel Bardor
Microalgae could help deciphering the evolution of N-glycosylation pathways
09h15
CO-13
Elizabeth Ficko-Blean
Unraveling the multivalent binding of a marine family 6 carbohydrate-binding module with its native laminarin ligand
09h30
CO-14
Corinne Pau-Roblot
Polygalacturonase from Arabidopsis thaliana: to new enzymes for industrial applications
09h45
CI-14
Jérôme Pelloux
Roles of pectin methylesterases (PMEs) in plant development: how to fine-tune the degree of methylesterification of pectins ?
10h15 : pause
Session 9
modérateurs
D. Bonnaffé
S. Pérez
10h45
CI-15
Caroline Rémond
Glycoside hydrolases as enzymatic tools for the functionalization of carbohydrates
11h15
CO-15
Cédric Peyrot
Chemo-enzymatic synthesis of innovant glycolipids for cosmetic formulation
11h30
CO-16
Isabelle Compagnon
Infrared Multiple Photon Dissociation Spectroscopy : a new powerful technique for structural characterization of carbohydrates
11h45
CI-16
Etienne Fleury
Preparation, characterization and properties of bio-hybrid materials from guar gum, ionic liquid and poly(ionic liquid)
12h15 : déjeuner
14h30
SESSION POSTERS 2 (n° pairs)
16h00 : pause
Session 10
modérateurs
P. Lerouge
J-C. Michalski
16h30
CI-17
Richard Daniellou
Enzymatic synthesis of thioglycoconjugates: our recent progresses
17h00
CI-18
Catherine Ronin
Glycoengineering therapeutic biologics : optimization of next generation antibodies
17h30
CI-19
Serge Pérez
Popular glycosciences: building, seeing and playing with complex carbohydrates
18h00
ASSEMBLEE GENERALE DU GFG
vendredi 27 mai
Session 11
08h45
CI-20
Cédric Przybylski
modérateurs
F. Allain
C. Lopin-Bon
09h15
DUO-02
09h30
CI-21
10h00
CEREMONIE DE CLOTURE
Samir Dahbi & Isabelle
Bertin-Jung
David Bonnaffé
Interaction of glycosaminoglycans with cytokine biochips probed by Surface Plasmon Resonance Imaging coupled with Mass
Spectrometry (SPRi-MS)
Chemical synthesis and development of modified xylosides as potential inhibitors targeting β4GalT7, a key enzyme in glycosaminoglycan
biosynthesis initiation
1,2-cis-glycosylation: the 2-azido-2-deoxy-D-gluco case in heparan sulfate fragment synthesis
3
COMMUNICATIONS INVITéES (CI)
5
CI-01
CI-02
Congenital Disorders of Glycosylation and Golgi
homeostasis: an unexpected link!
Glycans in enteric virus infection
Jacques Le Pendu
François Foulquier, Sven Potelle, Eudoxie Dulary, Sandrine Duvet, Dorothée Vicogne, Marie-
CRCNA, Inserm UMR892, CNRS UMR 6299, Université de Nantes
Ange Krzewinski-Recchi, Willy Morelle & Geoffroy de Bettignies
Noroviruses (NoVs) and rotaviruses (RVs) represent the most common causes of
gastroenteritis. Despite their complete lack of phylogenetic relationship, human strains of
these 2 families of viruses share similar carbohydrate-binding properties. Thus, human NoVs
have been known for some time to attach to histo-blood group antigens (HBGAs) and recent
data indicate that some strains additionally bind to gangliosides [1, 4]. Likewise, recent works
showed that human RV strains appear to recognize both gangliosides and HBGAs [5]. These
common glycan-binding properties within the 2 virus families, suggests shared molecular
mechanisms of infection. Moreover, either volunteers’ studies and/or analyses of outbreaks
demonstrated that for both NoVs and RVs, the HBGA polymorphism restricts infection to
individuals presenting the correct HBGAs [2, 4]. A given strain appears to infect a subgroup
of the population only, suggesting a past co-evolution of humans and both NoVs and RVs
that led to a trade-off where the human population is partly protected whilst the virus
circulation is maintained [3]. The partial protection of the population afforded by the HBGAs
polymorphism, termed herd innate protection, can be complemented by herd immunity [4].
This can have important implications for the development of vaccines. In addition, blocking
glycan-binding could provide a common preventive or therapeutic approach.
1.
2.
3.
4.
5.
1
Univ. Lille, CNRS, UMR 8576 – UGSF - Unité de Glycobiologie Structurale et Fonctionnelle, F-59000
Lille, France.
Congenital disorders of glycosylation (CDG) are severe inherited diseases in which aberrant
protein glycosylation is a hallmark. From this genetically and clinically heterogenous group, a
significant subgroup due to Golgi homeostasis defects is emerging. We previously identified
TMEM165 as a Golgi protein involved in CDG. Extremely conserved in the eukaryotic reign,
the molecular mechanism by which TMEM165 deficiencies lead to Golgi glycosylation
abnormalities is enigmatic. As GDT1 is the ortholog of TMEM165 in yeast, both gdt1Δ null
mutant yeasts and TMEM165 depleted cells were used. We highlighted that the observed
Golgi glycosylation defects due to Gdt1p/TMEM165 deficiency result from Golgi manganese
homeostasis defect. We discovered that in both yeasts and mammalian Gdt1p/TMEM165
deficient cells, Mn2+ supplementation could restore a normal glycosylation. This suggests
that TMEM165 is a key determinant for the regulation of Golgi Mn2+ homeostasis.
Han L, Tan M, Xia M, Kitova EN, Jiang X, Klassen JS (2014) Gangliosides are ligands for
human noroviruses. JACS 136:12631-12637
Imbert-Marcille B-M, Barbé L, Dupé M, Le Moullac-Vaidye B, Besse B, Peltier C, RuvoënClouet N, Le Pendu J (2013) A FUT2 gene common polymorphism determines resistance to
rotavirus A of the P[8] genotype. J Infect Dis 209:1227-1230
Le Pendu J, Nystrom K, Ruvoen-Clouet N (2014) Host-pathogen co-evolution and glycan
interactions. Curr Opin Virol 7:88-94
Ruvöen-Clouet N, Belliot G, Le Pendu J (2013) Noroviruses and histo-blood groups: the
impact of common host genetic polymorphisms on virus transmission and evolution. Rev Med
Virol 23:355-366
Tan M, Jiang X (2014) Histo-blood gorup antigens: a common nich for norovirus and rotavirus.
Expert Rev Mol Med 16:e5
7
CI-03
CI-04
Galectins, key players of homeostasis
Novel cyclooctyne-based probes with exciting physical
properties for the bioorthogonal labeling of glycoconjugates
Johann Dion, Christophe Dussouy, Samir Dahbi, Annie Lambert, Nataliya Storozhylova,
Claude Solleux, Charles Tellier, Stéphane Téletchéa & Cyrille Grandjean
Frédéric Friscourt 1, Petr Ledin 2, Richard Steet 2, Geert-Jan Boons 2 & Christoph Fahrni 3
Unité Fonctionnalité & Ingénierie des Protéines, UMR CNRS 6286,
Université des Sciences et Techniques de Nantes
1
Institut Européen de Chimie et Biologie, Université de Bordeaux, INCIA,
CNRS UMR5287, Pessac, France, [email protected]
2
Complex Carbohydrate Research Center, Athens, University of Georgia, GA USA
3
School of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, GA USA
The galectins form a ubiquitous family of lectins which bind to β-galactoside motifs through a
conserved carbohydrate recognition domain (CRD). Galectins play a major role in cell
development, homeostasis as well as in immune and inflammatory response. The
deregulation of their expression/function is directly or indirectly associated to more than 100
pathologies such as cancer, arthritis, fibrosis, polycystic kidney disease… Evidence of their
mode of action is, however, often indirect and their study made difficult due to their
spatiotemporal localization and possible co-expression of several galectins within the same
cell/tissue. [1]
Focusing on Galectin-3, we aim at developing inhibitors of high affinity and specificity to shed
light on biological processes Gal-3 is involved in and, at term, to propose novel therapeutic
strategies.
Lactosamine of type I (Galb1-3GlcNAc] and type II (Galb1-4GlcNAc) are the minimal natural
motifs recognized by Gal-3. While presence of OH groups at positions C4’, C6’ and C3 (or
C4) is mandatory for the binding, modifications at other positions is tolerated. We have
developed access to either type I or type II lactosamine-based inhibitors according to chemoenzymatic or chemical strategy, respectively. Pharmacophores have been introduced at key
positions of these sugar motifs so as to optimize the recognition by the galectin-3 CRD
(Figure).
Selected inhibitors have been further modified for studying the role of galectin-3 in cell
division and migration as well as in inflammation. Some of these biological results will also
been discussed.
The bioorthogonal chemical reporter strategy, which elegantly combines the use of
metabolically labeled azido sugars and highly reactive cyclooctyne probes, is emerging as a
versatile technology for labeling and visualizing glycans.1
Although, the first generation of cyclooctynes exhibited relatively slow kinetics,2 efforts to
increase reaction rates by tailoring the cyclooctyne structure have led to the identification of
the dibenzocyclooctyne framework as key scaffold for high reactivity.3 However, increasing
the aromatic nature of the cyclooctyne probes also augments their hydrophobicity, which can
promote their sequestration by membranes or nonspecific binding to serum proteins, thereby
increasing background signal.
To address these difficulties, we have developed two novel dibenzocyclooctynes (Fig 1):
1. A highly polar O-sulphated-dibenzocyclooctyne (S-DIBO),4 which does not penetrate the
cellular membrane, resulting in the selective labeling of extracellular glycoconjugates in
living cells;
2. A fluorogenic cyclooctyne (Fl-DIBO)5 that undergoes fast cycloadditions with azides to
yield strongly fluorescent triazoles.
Figure 1 : Novel cyclooctynes with enhanced physical properties
References :
[1] J.A. Prescher, C.R. Bertozzi, Nat. Chem. Biol., 2005, 1, 13-21.
[2] N.J. Agard, J.M. Baskin, J.A. Prescher, A. Lo, C.R. Bertozzi, ACS Chem. Biol., 2006, 1, 644-648.
[3] (a) X. Ning, J. Guo, M. A. Wolfert, G-J. Boons, Angew. Chem. Int. Ed., 2008, 47, 2253-2255; (b)
J.C. Jewett, E.M. Sletten, C.R. Bertozzi, J. Am. Chem. Soc., 2010, 132, 3688-3690; (c) M.F.
Debets, S.S. van Berkel, S. Schoffelen, F.P.J. Rutjes, J.C.M. van Hest, F.L. van Delft, Chem.
Commun., 2010, 46, 97-99.
[4] F. Friscourt, P.A. Ledin, N. E. Mbua, H.R. Flanagan-Steet, M.A. Wolfert, R. Steet, G-J. Boons, J.
Am. Chem. Soc., 2012, 134, 5381-5389.
[5] F. Friscourt, C.J. Fahrni, G-J. Boons, J. Am. Chem. Soc., 2012, 134, 18809-18815.
Figure: Access to type I or type II lactosamine and their recognition by Galectin-3 CRD
References:
[1] Galectins, eds. A.A. Klyosov, Z.J. Witczak and D. Platt, Wiley, Hoboken (2008).
[2] S. André, C. Grandjean, F.-M. Gautier, S. Bernardi, F. Sansone, H .-J. Gabius, R. Ungaro,
Chem. Commun., 2011, 47, 6126-6128
8
CI-05
CI-05
CI-06
Chemoselective ligations: highly efficient strategies for the
construction of biologically active multivalent glycoconjugates
Discovery and applications of new sucrose-active
enzymes from GH70 family
Olivier Renaudet1,2
1
Marlène Vuillemin, Marion Claverie, Florent Grimaud, Etienne Severac,
Sandrine Morel, Magali Remaud-Simeon & Claire Moulis
Univ. Grenoble Alpes, DCM, 38000 Grenoble, France; CNRS, DCM, 38000 Grenoble, France
2
Institut Universitaire de France, 103 boulevard Saint-Michel, 75005 Paris, France
LISBP, Université de Toulouse, CNRS, INRA, INSA,
135 avenue de Rangueil, 31077 Toulouse, France
Synthetic glycoclusters and glycodendrimers have stimulated increasing interests over the
past decade [1]. Among the large variety of multivalent scaffolds reported so far, our group is
focusing on cyclopeptide-based glycoconjugates for diverse biological applications [2]. In this
context, well-defined structures with various size, sugar density and combination (Figure 1)
have been prepared in a controlled manner using either single or orthogonal chemoselective
procedures (i.e. oxime ligation, Huisgen 1,3-dipolar cycloaddition, thiol-ene coupling, thiolchloroacetyl coupling). Here we present the synthesis of several 4-, 16- and 64-valent
compounds [3] and their biological properties as nanomolar lectin ligands [4] and antitumoral
vaccines [5].
Polysaccharide-based materials are now recognized as attractive alternatives to polymers
derived from carbon fossil fuels, as revealed by their broad range of applications in food &
feed, agriculture, health, or in chemical industries. In this context, some α-transglucosylases
produced by lactic acid bacteria can be of interest, as they catalyze the synthesis of high
molar mass α-glucans, glucooligosaccharides or gluco-conjugates from sucrose[1], a low-cost
and abundant renewable resource.
These α-transglucosylases are classified in GH70 family[2], which comprises today around
300 sequences for only about sixty enzymes biochemically characterized, that remains low.
To accelerate the development of enzymatic glucosylation tools with desired properties, our
work is focused on their structure-activity relationship studies and engineering. However, the
natural diversity of GH70 enzymes is far from being fully explored, and the repertoire of our
enzymatic tool-box enzymes could be expand by exploring the numerous lactic acid bacterial
genomes sequences available in databases.
This presentation will describe our recent findings on several very original GH70 enzymes
isolated thanks to data mining or genome sequencing campaigns. Distinctive specificities in
term of glucan molar masses and/or structure (degree of α-1,2 or α-1,3 branching onto linear
α-1,6 backbones) will be reported, as their impact on the physico-chemical properties of the
final products.
Figure 1: Molecular model of 4-, 16- and 64-valent glycoconjugates.
References :
[1] Leemhuis H et al. (2013) J. Biotechnol. 163, 250–272
[2] Lombard Vet al. (2013) Nucleic Acids Res. 42, 490–495
References :
[1] O. Renaudet, R. Roy, Chem. Soc. Rev., 2013, 42, 4515.
[2] M. C. Galan, P. Dumy, O. Renaudet, Chem. Soc. Rev., 2013, 42, 4599.
[3] a) B. Thomas, C. Pifferi, G. C. Daskhan, M. Fiore, N. Berthet, O. Renaudet. Org. Biomol. Chem.,
2015, 13, 11529; b) B. Thomas, M. Fiore, G. C. Daskhan, N. Spinelli, O. Renaudet, Chem.
Commun., 2015, 51, 5436; b) B. Thomas, N. Berthet, J. Garcia, P. Dumy, O. Renaudet, Chem.
Commun., 2013, 49, 10796.
[4] a) N. Berthet, B. Thomas, I. Bossu, E. Dufour, E. Gillon, J. Garcia, N. Spinelli, A. Imberty, P.
Dumy, O. Renaudet, Bioconjugate Chem., 2013, 24, 1598; b) M. Fiore, N. Berthet, A. Marra, E.
Gillon, P. Dumy, A. Dondoni, A. Imberty, O. Renaudet, Org. Biomol. Chem., 2013, 11, 7113.
[5] a) B. Richichi, B. Thomas, M. Fiore, R. Bosco, H. Qureshi, C. Nativi, O. Renaudet, L.
BenMohamed. Angew. Chem. Int. Ed., 2014, 53, 11917; b) O. Renaudet, L. BenMohamed, G.
Dasgupta, I. Bettahi, P. Dumy, ChemMedChem, 2008, 3, 737.
9
CI-07
CI-08
Conventional and sustainable bioprocesses for the
extraction of antiherpetic oligo- and polysaccharides from
the invasive Solieria chordalis (Rhodophyta, Gigartinales).
Polysaccharides: from hydrocolloids to textured materials
Françoise Quignard
ICGM, UMR 5253 CNRS-UM2-ENSCM-UM1, Matériaux Avancés pour la Catalyse et la Santé, 8 Rue
de l'Ecole Normale, 34296 Montpellier Cedex 5, France.
Nathalie Bourgougnon1, Anne-Sophie Burlot1, Romain Boulho1, Yolanda Freile-Pelegrin2,
Christel Marty1, Gilles Bedoux1, Daniel Robledo2.
1
The introduction of renewable resources in the production of catalyst supports and adsorbent
is only possible if the materials intended to replace oil-derived or energy-intensive solids
comply with strict requirements, like as high surface area, appropriate surface chemistry and
porosity, thermal and chemical stability, and low cost. Hydrocolloid-forming polysaccharides
are natural polyelectrolytes able to gelify water when added in tiny amounts. Hydrogels
containing 1-2 % polymer and 98-99 % water can be shaped as self-standing spheres or
films with good mechanical stability. Natural polysaccharides, albeit known for many years as
supports for enzymatic catalysts and gelling agents in aqueous phase, suffer from diffusional
limitations, due to the low surface area of the dried materials generally used, xerogels or
lyophilised solids. This lecture deals with the proper methods to prepare dry materials which
retain the dispersion of the polymer hydrogel, namely polysaccharide aerogels [1]. In one
hand, the aerogel formulation opens the way to the exploitation of the surface properties and
the high dispersion of the large family of polysaccharides for reactions at the interface
between the polymer and a gas or an organic solvent. Applications in catalysis [2, 3],
adsorption and chemical sensing can take advantage of the reactivity of the functional
groups of the polymers or of catalytic sites in electrostatic or covalent interaction with the
polysaccharide. In the other hand, aerogel formulation allows the extension to hydrocolloid
derivatives of the techniques classically used for the characterization of inorganic solids, in
particular those implying a high vacuum environment [4].
2
Univ. Bretagne-Sud, EA 3884, LBCM, IUEM, F-56000 Vannes, France.
Marine Resources Department, Centro de Investigación y de Estudios Avanzados
del Instituto Politécnico Nacional (CINVESTAV), Mérida, Mexico
Carrageenan is a generic name for a family of natural, water-soluble, sulphated galactans
that are isolated from Rhodophyta and exploited on commercial scale. These phycocolloids
exhibit high viscosity, and stabilizing, emulsifying and unique gelling properties used in the
pharmaceutical, chemical and food industries. They were also shown to be potent and
selective inhibitors of several enveloped viruses replication in vitro. Their modes of action
have been attributed to the blockage of some early stages of the virus replication cycle.
The carrageenophyte Solieria chordalis (C. Agardh) J.Agardh (Gigartinales, Solieriaceae)
has been observed in the Gulf of Morbihan (France) since 2005 and in the Sarzeau
peninsula (Morbihan, France) where strandings have become more abundant between July
and October. S. chordalis is a real economic and environmental burden due to its littoral
anarchic proliferation. The processing of this raw material is little developed and provides
little added value whereas it constitutes a biomass potentially rich in highly bioactive
polysaccharides that could represent useful avenues for the development of new functional
ingredients in pharmaceutical industries.
The aim of this conference is then to compare and discuss the use of sustainable
bioprocesses for extracting and purifying antiviral polysaccharides from Solieria chordalis. To
improve the extraction conditions of polysaccharides, we propose to use Microwave Assisted
extraction (MAE) and Enzyme-Assisted Extraction (EAE) techniques in comparison with the
conventional Hot Water Extraction (HWE). Comparison of yields and chemical composition
analysis of extracts were performed for each processes. Antiviral activity from oligo- and
polysaccharides was evaluated in mammalian cell lines infected by Herpes simplex virus
type 1 (HSV-1; family Herpesviridae) in vitro.
References :
[1] Quignard, F; Valentin, R; Di Renzo, New . J. Chem. 2008, 32, 1300. DOI: 10.1039/b808218a
[2] Chtchigrovsky, M; Lin, Y; Ouchaou, K; Chaumontet, M; Robitzer, M ; Quignard, F; Taran, F. Chem.
Mater. 2012, 24, 1505. DOI: 10.1021/cm3003595 -Chtchigrovsky, M; Primo, A; Gonzalez, P;
Molvinger, K; Robitzer, M; Taran, F; Quignard, F.Angew Chem, 2009, 32, 5916. DOI:
10.1002/anie.200901309
[3] Pettignano, A; Bernardi, L; Fochi, M; Geraci, L; Robitzer, M; Tanchoux, N; Quignard, F. New . J.
Chem. 2015, 39, 4222. DOI: 10.1039/c5nj00349k.
[4] Robitzer, M; Di Renzo, F; Quignard, F. Microp. Mesop. Mat., 2011, 140, 9-16 DOI:
10.1016/j.micromeso.2010.10.006.
10
CI-09
CI-10
Synthetic carbohydrate-based vaccines against
shigellosis: from concept to clinic … and more
Molecular bases of Mycobacterium tuberculosis
recognition by C-type lectins:
from the modulation of innate immune response
to the design of therapeutic molecules
Laurence Mulard 1,2
1
2
Jérôme Nigou
Institut Pasteur, Unité de Chimie des Biomolécules, 28 rue du Dr Roux,
75724 Paris Cedex 15, France
CNRS UMR 3523, Institut Pasteur, 28 rue du Dr Roux, 75724 Paris Cedex 15, France
Institut de Pharmacologie et de Biologie Structurale, Université de Toulouse, CNRS, UPS, France
Shigellosis, or bacillary dysentery, caused by the non capsulated enteroinvasive bacteria
Shigella, is a major burden especially in developing countries. It remains one of the top four
diarrheal diseases in children under five.1 Species and serotype diversity, added to their
geographical distribution, strongly support the need for a multivalent vaccine.2 With regard to
endemic shigellosis, special attention is paid to Shigella flexneri and Shigella sonnei.
Interestingly, protection against re-infection is thought to be achieved, to a large extent, by
antibodies specific for the O-antigen moiety of the lipopolysaccharide. In this context, a
multidisciplinary
strategy
toward
vaccine
candidates
encompassing
synthetic
oligosaccharides mimicking the “protective” determinants carried by the O-antigen of
selected serotypes was undertaken in the laboratory. The two-step process under
development aims first at identifying sets of “protective” epitopes, and second at designing
conjugates thereof acting as strong immunogens.
Mycobacterium tuberculosis, the causative agent of tuberculosis, is one of the most effective
human pathogens. It has evolved multiple molecular mechanisms to alter immune
responses, including inflammation, thereby securing its colonization and survival inside the
infected host. In particular, M. tuberculosis exposes specific glycolipids and lipoglycans at its
cell envelope surface to target C-type lectin receptors (CLRs), DC-SIGN, Mannose Receptor
or Mincle, expressed by innate immune cells, such macrophages and dendritic cells.
The strategies used by M. tuberculosis to modulate the host inflammatory response
prompted us to design synthetic molecules that mimic the bioactive structure of natural
mycobacterial
glycoconjugates,
with
the
objective
of
developing
innovative
immunomodulatory compounds. To achieve this goal, we used a combination of approaches,
including identification of the natural CLR agonist molecules present in the mycobacterial cell
envelope, deciphering the molecular mechanisms of ligand-receptor interaction and bioguided chemical synthesis.
This presentation first highlights the pre-clinical development of a monovalent S. flexneri 2a
glycovaccine candidate now entering the clinical stage.3 Second, it addresses our strategy
for broadening vaccine coverage. Interestingly, with the exception of serotypes 6 and 6a, all
known repeating units from S. flexneri O-antigens comprise a common tetrasaccharide
backbone. Diversity and serotype specificity are related to the occurrence of α-Dglucosylation and/or acetylation at specific hydroxyl groups of the basic tetrasaccharide, itself
a linear combination of three L-rhamnose residues and a N-acetyl-D-glucosamine.4 The
possible impact of these substitutions on vaccine development is discussed, while their
influence on hapten synthesis is exemplified. In particular, we illustrate the multidisciplinary
strategy that we have implemented to identify promising well-defined mimics of the O-antigen
from S. flexneri 3a, another prevalent serotype. We report a detailed investigation of the
immunodominant role of O-antigen stoichiometric O-acetylation as revealed by chemical
synthesis, immunochemistry, physical chemistry, NMR, and X-ray crystallography studies.
Next, we describe the rational design, synthesis, and immunogenicity data of the first
synthetic carbohydrate-based vaccine candidate against S. flexneri 3a. Finally, we discuss
preliminary immunogenicity data for a set of S. flexneri 2a / S. flexneri 3a glycoconjugate
combinations and extension to additional serotypes prevalent in the field.
During my talk, I will present the example of two fully synthetic families of molecules that
display powerful activities in vitro and in vivo in mouse models: i) anti-inflammatory
mannodendrimers, ligands of DC-SIGN, that prevent acute lung inflammation; ii) adjuvant
glycolipids, ligands of Mincle, that induce strong Th1 and Th17 immune responses.
These immunomodulatory compounds are currently tested in different pathologically models
to determine the broader applicability of their therapeutic use.
References :
[1] K. L. Kotloff et al., The Lancet 2013, 382, 209.
[2] M. M. Levine et al., Nat. Rev. Microbiol., 2007, 5, 540.
[3] R. van der Put et al., Bioconjugate Chem., 2016, DOI: 10.1021/acs.bioconjchem.5b00617.
[4] A. V. Perepelov et al., FEMS Immunol. Med. Microbiol., 2012, 66, 201.
11
CI-11
CI-12
Membrane Enzymes: the Structural Basis
of Phosphatidylinositol Mannosides Biosynthesis
in Mycobacteria
The glycosyl cation: from observation to exploitation
Yves Blériot 1, Amélie Martin 1, Ana Arda 2, Jérôme Désiré 1, Agnès Mingot 1, Nicolas
Probst1, Jesus Jimenez-Barbero 2 & Sébastien Thibaudeau 1
Marcelo E. Guerin 1,2
1
1
Structural Biology Unit, CIC bioGUNE, Bizkaia Technology Park, 48160 Derio, Spain
2
IKERBASQUE, Basque Foundation for Science, 48013, Bilbao, Spain.
Membrane enzymes constitute a large class of proteins with critical roles in a variety of
cellular processes in all living organisms. They generate a significant amount of structural
diversity in biological systems, which are particularly apparent not only in the maintenance of
the structural integrity of the cell, but also in cell signaling and metabolism, and cell-pathogen
interactions. Many of these cellular reactions involve both hydrophobic and hydrophilic
molecules that reside within the chemically distinct environments defined by the
phospholipid-based membranes and the aqueous lumens of cytoplasm and organelles.
Thus, enzymes performing this type of reaction are required to access a lipophilic substrate
located in the membranes and to catalyze its reaction with a polar, water-soluble
compound.[1]
Here we focus on the membrane enzymes involved in the early steps of the
phosphatidylinositol mannosides (PIMs) biosynthetic pathway, unique glycolipids found in
abundant quantities in the inner and outer membranes of the cell envelope of all
Mycobacterium species. They are based on a phosphatidylinositol lipid anchor carrying one
to six mannose residues and up to four acyl chains. PIMs are considered not only essential
structural components of the cell envelope but also the structural basis of the lipoglycans
(lipomannan and lipoarabinomannan), important molecules implicated in host-pathogen
interactions in the course of tuberculosis and leprosy. Of particular relevance, we
demonstrate the occurrence of a conformational switch during the catalytic cycle of the
retaining glycosyltransferase PimA, the enzyme that start the pathway, involving both βstrand–to–α-helix and α-helix–to–β-strand transitions.[2] These structural changes seem to
modulate catalysis and are promoted by interactions of the protein with anionic phospholipids
in the membrane surface. Although scant structural information is currently available on
protein catalysis at the lipid-water interface, our studies demonstrate that protein-membrane
interactions might entail unanticipated structural changes in otherwise well conserved protein
architectures, and suggests that similar changes may also play a functional role in other
membrane-associated enzymes.
Finally, we report the crystal structures of PatA, an essential membrane associated
acyltransferase that transfers a palmitoyl moiety from palmitoyl–CoA to the 6-position of the
mannose ring added by PimA, in the presence of its naturally occurring acyl donor palmitate
and a nonhydrolyzable palmitoyl–CoA analog. The structures reveal an α/β architecture, with
the acyl chain deeply buried into a hydrophobic pocket that runs perpendicular to a long
groove where the active site is located. Enzyme catalysis is mediated by an unprecedented
charge relay system, which markedly diverges from the canonical HX4D motif. Our studies
establish the mechanistic basis of substrate/membrane recognition and catalysis for an
important family of acyltransferases, providing exciting possibilities for inhibitor design.
IC2MP, UMR CNRS 7285, Equipe “Synthèse organique” Université de Poitiers, France
2
CIC bioGUNE, Bizkaia Technological Park, 48160 Derio-Bizkaia, Spain
The central reaction in glycosciences is arguably glycosylation, the formation of the
glycosidic bond that connects a sugar to another molecule. It can be performed
enzymatically through the use of glycosyl transferases or chemically using glycosyl donors
and acceptors. Surprisingly, while the enzymatic mechanism has gained a high level of
knowledge and sophistication, some of the details of the chemical glycosylation mechanism
are still poorly understood (Figure 1).1 Both mechanisms probably involve transient glycosyl
cations to some degree. Observation, characterisation and further exploitation of these key
ionic species could have a strong impact on applied and fundamental aspects of
glycosciences. Our recent contribution to this field will be presented.2
ARTICLES
of each of the five
protons as singlets
E X
PO
PO
PO
deduced from this sp
LG
LG
partially protonated
E
Glycosyl
C
B
brium that is not det
donor A
Conformation?
out24. It is remarkable
Stereochemical outcome?
ation reaction takes p
peracetylated α-D-gluc
tonated species 3, also
O
O
tage of the neighbour
O
PO
PO
PO
group at C2 (ref. 25),
X
X
X
known dioxalenium io
E
F
D
the dioxonium signal
C1
carbon (δ = 108.6
b
Figure 1 : Prototype of the chemical glycosylation mechanism
(δ
=
13.8 ppm). A 4H5
O
13
13
paring the experimen
C: 228.5 ppm
References :
C: 3.8 ppm
13
C: 150.7 ppm
1
1
H: 8.89
ppm 14, 3-16. O
[1] L. Bohé, D. Crich, C.R. Chimie,
2011,
H: 2.57 ppm
orbitals–density func
[2] A. Martin, A. Arda,
J. Désiré, N. Probst, A. Mingot, P. Sinaÿ, J. Jimenez-Barbero, S. Thibaudeau,Y.
1
and
coupling constan
Blériot, Nat. Chem. 2016, 8, 186-191.
known oxazolinium i
c
N-acetyl-β-D-glucosam
OAc*
OAc*
*AcO
O
*AcO
O
*AcO
formation according t
*AcO
O
*AcO
*AcO
These results indi
O
O
*AcO
OAc*
*AcHN
OAc*
cations can be trappe
OAc*
group at C2, further
2 (4C1)
3 (4C1)
4 (4H5)
nated and unprotona
meric assistance by
*AcO
O
OAc*
study, targeting stabi
H
OAc*
bining superacid che
O
O
*AcO =
confirmed the potent
HN
O
for the study of high
a
O
References :
[1] Forneris, F.; Mattevi, A. Science 2008, 321, 213-216. [2] Giganti et al., Nat. Chem. Biol. 2015, 11,
16-18. Highlighted in the News and Views Section: Brodhun F, Tittmann K. Nat. Chem. Biol. 2015,
11, 102-103. [3] Albesa-Jove et al., Angew. Chem. Int. Ed. Engl. 2015, 54, 9898-9902.
[4] Albesa-Jove et al., Nat. Commun. 2016, 7, 10906.
12
NATURE
O
O
CI-13
CI-14
Microalgae could help deciphering the evolution
of N-glycosylation pathways
Roles of pectin methylesterases (PMEs) in plant
development: How to fine-tune the degree of
methylesterification of pectins?
Clément Ovide1*, Gaëtan Vanier1*, Elodie Mathieu-Rivet1, Carole Burel1,
Patrice Lerouge1, Marie-Christine Kiefer-Meyer1 & Muriel Bardor1, 2
1
Ludivine Hocq1, Fabien Sénéchal1, Olivier Habrylo1, Françoise Fournet1, Jean-Marc Domon1,
Paulo Marcelo2, Alexis Peaucelle3, Françoise Guérineau1, Katra Kolšek4, Davide
Mercadante4, Valérie Lefebvre1, Jérôme Pelloux1
Normandie Univ, UNIROUEN, Laboratoire Glycobiologie et Matrice Extracellulaire végétale
76000 Rouen, France.
2
Institut Universitaire de France (IUF), Paris, France. *Equal contribution of the two authors
1
Despite the biological and physiological significance, along with knowledge regarding the Nglycosylation processing in Eukaryotes, little attention has been paid so far to this
biosynthetic pathway in microalgae even if they are interesting organisms spread in different
phyla of the tree of life. Moreover, microalgae emerged recently as potential cell bio-factories
for the production of biopharmaceuticals [1] for which glycosylation represent a critical quality
attribute [2].
EA3900-BIOPI Biologie des Plantes et Innovation SFR Condorcet FR CNRS 3417,
Université de Picardie, 33 Rue St Leu, F-80039 Amiens, France.
2
3
4
In order to characterize the N-glycosylation pathways in microalgae, we took advantage of
the recent genomic sequencing of several microalgae models belonging to different phyla of
the tree of life and identify a set of putative orthologs involved in the different key steps of the
N-glycan biosynthesis and maturation. For some of the microalgae like the green microalgae
Chlamydomonas reinhardtii and the diatom Phaeodactylum tricornutum, detailed structural
analyses of the N-glycans bearing by their endogenous proteins have already been
performed, thus reflecting their capabilities in term of N-glycan biosynthesis [3-5]. Moreover,
we started to clone and functionally characterize some of the microalgae
glycosyltransferases and glycosidases. We already demonstrated that a Phaeodactylum
tricornutum gene is encoding for a N-acetylglucosaminyltransferase I which is functional.
Indeed, this gene encodes for an active N-acetylglucosaminyltransferase I which is able to
restore complex-type N-glycans maturation in the Chinese Hamster Ovary Lec1 mutant,
defective in its endogeneous N-acetylglucosaminyltransferase I [3]. This piece of work
represented the first functional characterisation of N-glycan glycosyltransferase from
microalgae. Further functional characterizations and localisation of putative
glycosyltransferases are currently under investigation to shed the light about the specific
Golgi maturations and organisation occurring in microalgae N-glycosylation pathway.
Plateforme d’Ingénierie Cellulaire & Analyses des Protéines ICAP
Université de Picardie Jules Verne, 80039 Amiens, France.
UMR1318-IJPB, INRA Centre de Versailles-Grignon, Versailles, France.
HITS gGmbH - Heidelberg Institute for Theoretical Studies, Schloß-Wolfsbrunnenweg 35,
69118 Heidelberg, Germany.
The fine-tuning of the degree of methylesterification of cell wall pectin is a key to regulate cell
elongation and ultimately the shape of plant body. Pectin methylesterification is spatiotemporally controlled by pectin methylesterases (PMEs, 66 members in Arabidopsis). The
comparably large number of proteinaceous pectin methylesterase inhibitors (PMEIs)
questions the specificity of the PME-PMEI interaction and the functional role of such
abundance. We first characterized the role of PMEs in regulating cell expansion during darkgrown hypocotyl. In this simple model, developmental and cell biology, genomics,
biochemistry, and biophysics can be integrated at a cellular level. Using mutant plants
impaired for the expression of PME2 and PME32, we show how PMEs can mediate changes
in pectin chemistry and cell wall mechanics, with consequent effects on elongation. To gain
more insights into the fine tuning of PME activity, we characterized PME-PMEI interactions.
For this purpose, we combined biochemistry and Molecular Dynamic (MD) simulations
approaches to assess the determinants of the pH-dependence of the interaction. Using sitedirected mutagenesis, we confirmed the role of specific amino acids in modulating the
interaction. MD simulation have proven to be powerful to predict the differences between
PMEI, allowing the discovery of a strategy that may be used by PMEIs to inhibit PMEs in
different micro-environmental conditions and paving the way to identify the specific role of
distinct PMEIs in muro.
References:
[1] Vanier G., Hempel F., Chan P., Rodamer M., Vaudry D., Maier U., Lerouge P. and Bardor M.
(2015) Plos ONE, DOI:10.1371/journal.pone.0139282.
[2] Lingg N., Zhang P., Song Z. and Bardor M. (2012) Biotechnology Journal, 12, 1462-1472.
[3] Baiet B., Burel C., Saint-Jean B., Louvet R., Menu-Bouaouiche L., Kiefer-Meyer M.-C., MathieuRivet E., Lefebvre T., Castel H., Carlier A., Cadoret J.-P., Lerouge P. and Bardor M. (2011) Journal
of Biological Chemistry, 286, 6152-64.
[4] Mathieu-Rivet E., Scholz M., Arias C., Dardelle F., Schulze S., Le Mauff F., Teo G., Hochmal A.K.,
Blanco-Rivero A., Loutelier-Bourhis C., Kiefer-Meyer M.-C., Fufezan C., Burel C., Lerouge P.,
Martinez F., Bardor M.* and Hippler M.* (2013) Mol cell Proteomics. 12(11):3160-83.
[5] Mathieu-Rivet E., Kiefer-Meyer M.C., Vanier G., Ovide C., Burel C., Lerouge P. and Bardor M.
(2014) Frontiers in Plant Science, section Plant physiology, Jul 28; 5:359.
13
CI-15
CI-16
Preparation, characterization and Properties
of Bio-Hybrid materials from Guar Gum,
Ionic Liquid and Poly(Ionic Liquid)
Glycoside hydrolases as enzymatic tools
for the functionalization of carbohydrates
Caroline Rémond
Biao Zhang, Anatoli Serghei, Guillaume Sudre, Julien Bernard,
Aurélia Charlot & Etienne Fleury
UMR FARE 614 - Chaire AFERE, Université de Reims Champagne Ardenne - INRA
Université de Lyon, Lyon, F-69003 France. INSA-Lyon, IMP, Villeurbanne, F-69621 France.
CNRS, UMR 5523, Ingénierie des Matériaux Polymères, Villeurbanne, F-69621, France.
Glycoside corresponds to sugar moiety (monosaccharide to polysaccharide) covalently
linked to an aglycon part (small aglycon to protein and lipid). Numerous glycosides exist in
nature and some can be synthesized for various applications (surfactants, food, biological
activities, antimicrobial activities, …).
The growing interest in utilizing biohybrid materials arises from the possibility to benefit the
best features of each component to reach new tunable and adaptable materials. Indeed
these material are constituted of molecular or polymeric species, of biologic origin with other
components (e.g. synthetic polymers, ceramics, metal and metal oxides…) and their
combinations are in theory infinite.1 Herein we aim at generating non-conventional biobased
solid electrolytes in exploiting the synergistic interactions between galactomannan chains
and hydrophilic imidazolium ionic liquids (IL). Indeed the latter have unique attributes:
thermal and chemical stability, non-inflammability, non-volatility and high conductivity.2,3
Galactomannans, especially guar, are abundant non-toxic polysaccharides with high thermal
stability and commercial availability of very high molecular weights (up to 3 million g.mol-1).
We demonstrated that such guar/IL association leads to solid-like gels. 4,5 Then we focused
on the development of ternary blends presenting a higher degree of sophistication by
incorporating additional reinforcing building-blocks, such as imidazolium-based poly(ionic
liquid) (PIL). PIL are promising synthetic polymers which combine the properties of ILs and
the ones of polymers in terms of mechanical reinforcement, and dimensional stability. We
synthesized a series of PIL by RAFT polymerization and we particularly show the excellent
control of the polymerization.6 finally, we generated biohybrid guar-based grafted copolymer,
which can keep the intrinsic properties and also bring new properties of PILs that raw guar
gum does not have. Structure/properties relationships of the resulting multicomponent
systems were in-depth investigated. The rheological, thermal and conductive properties were
methodically studied and correlated with the morphology of the biohybrids by means of
synchrotron scattering measurements. The concept presented herein, based on biosourced
polymer-containing multi-component systems represents a promising route for the design of
advanced conductive materials.
The attachment of the sugar moiety modifies the properties of the aglycon notably by
improving its solubility in aqueous media. Glycosylation of aglycons can be obtained by
conventional chemical synthesis which allow obtaining reasonable yields but suffer from
numerous drawbacks such as protection and deprotection steps of the substrates, use of
solvents and toxic catalysts [1, 2]. Enzymatic glycosylation represents an interesting
alternative and can be achieved by glycosyl transferases, glycoside phosphorylases,
transglycosidases and glycoside hydrolases [3].
In vivo, glycoside hydrolases catalyze the hydrolysis of glycosidic linkages. In presence of
acceptor molecules different from water, some glycoside hydrolases can catalyze reverse
hydrolysis (thermodynamically controlled) or transglycosylation (kinetically controlled)
reactions which conduct to the synthesis of glycosides [4].
Figure 1 : Reactions catalyzed by glycoside hydrolases
Some examples of glycosides synthesis (alkyl glycosides, vitamin glycosides, …) with
glycoside hydrolases will be presented as well as strategies developed to improve synthesis
which can be achieved by protein engineering and/or by optimization of reactional conditions.
References:
1
Gao J., Maruyama A., Encyclopedia of Polymeric Nanomaterials, DOI: DOI 10.1007/978-3-64236199-9_231-1
2
Pinkert A., Marsh K. N., Pang S., Staiger M. P., Chem. Rev., 2009, 109, 6712–6728.
3
Hayes R., Warr G. G., Atkin R., Chem. Rew., 2015, 115, 6357-6426.
4
Lacroix C., Sultan E., E. Fleury, Charlot A. Polymer Chemistry, 2012, 3, 538
5
Verger L., Corre S., Poirot R., Quintard G., Fleury E., Charlot A., Carbohydr. Polym., 2014,10,932.
6
Zhang B., Yan X., Alcouffe P., Charlot A., Fleury, E., Bernard. J. ACS Macro Lett. 2015, 4, 1008-1011
References :
[1] Brusa, C., et al., beta-xylopyranosides: synthesis and applications. RSC Advances, 2015. 5(110):
91026-91055.
[2] de Roode, B.M., et al., Perspectives for the industrial enzymatic production of glycosides.
Biotechnology Progress, 2003. 19(5): 1391-1402.
[3] Thuan, N.H. and J.K. Sohng, Recent biotechnological progress in enzymatic synthesis of
glycosides. Journal of Industrial Microbiology & Biotechnology, 2013. 40(12): 1329-1356.
[4] van Rantwijk, F., M. Woudenberg-van Oosterom, and R.A. Sheldon, Glycosidase-catalysed
synthesis of alkyl glycosides. Journal of Molecular Catalysis B: Enzymatic, 1999. 6: 511-532.
14
CI-17
— Prix GFG 2016 —
CI-18
Glycoengineering therapeutic biologics :
optimization of next generation antibodies
Enzymatic synthesis of thioglycoconjugates:
our recent progresses
Catherine Ronin
Richard Daniellou 1,2
Siamed’Xpress
1
ICOA, UMR CNRS 7311, Université d’Orléans, rue de Chartres, BP6759, 45067 Orléans cedex 2
2
Cosm’actifs, GDR CNRS 3711
The N-linked glycan profiles of recombinant therapeutics significantly affect the biological
functions of the protein of interest, most often its duration in the circulation. The glycome of a
human protein drug engineered in host cells is largely determined by both the cellular
genotypes and culture settings. More particularly, antigenic sugar determinants are by now
formally prohibited. With pressure from pricing by the regulatory agencies and biosimilars
looming, more efficient and effective approaches are actively sought, among which the field
of glycoengineering is especially attractive because it also allows improvement of the 1st
generation molecules.
Carbohydrates play an important part in a vast array of biological processes and therefore
glycomimetics are currently becoming a powerful class of novel therapeutics.1 Amongst
them, thioglycosides, in which a sulfur atom has replaced the glycosidic oxygen atom, are
tolerated by most biological systems. Their major advantages rely in the fact that they adopt
similar conformations than the corresponding O-glycosides and especially that they prove to
be less sensitive to acid/base or enzyme-mediated hydrolysis. Such compounds have
already demonstrated to be valuable tools as good chemical donors for synthetic purposes,2,3
as stable intermediates in X-ray crystallographic analysis of proteins4 and, of particular
interest, as competitive inhibitors of a wide range of glycosidases involved in numerous
diseases.5 Besides the synthetic methodologies developed throughout the years by organic
chemists, the presence of natural S-glycoconjugates was recently assessed and lead to the
discovery of some glycosyltransferases involved in such rare biocatalytic processes. In
parallel, the increases of knowledge on the mechanism and the structure of glycoside
hydrolases have conducted to the development of original catalysts with greatly improved
synthetic properties for thioglycosidic linkages. However biocatalyzed procedures of
thioglycosylation still represent an emerging area.6
Over the past decade, the segment of therapeutic antibodies has become the highest selling
class of recombinant biological products: 7 out of 10 worldwide prescription drugs have been
antibodies in 2015. Most of them are of the IgG1 isotype. Biological studies have shown that
the distribution of the 27 glycans in the Fc fragment can significantly impact antibody
efficacy, stability and effector function. Indeed, the IgG glycome alternatively encodes proinflammatory or anti-inflammatory activities. This sugar switch is largely based on truncated
unusual biantennary glycans and core fucose. Adverse immunogenicity has been noticed
along with the earliest generation of engineered IgG scaffolds as well as from the use of
various expression systems. Today, there is a clear need to solve several of these different
issues. A key step in development for monoclonal antibodies undoubtedly involves
optimization and control of N-glycan profiles to produce next generation antibodies.
Herein, we will discuss our recent findings in this tremendous field. Firstly we will show our
results dealing with the glycosyltransferase S-UGT74B1 from Arabidopsis thaliana and
demonstrate its ability to promote the synthesis of various desulfoglucosinolates. Then, a
small library of mutants of glycoside hydrolases from Dictyoglomus thermophilum will be
used to demonstrate their ability to prepare the S-glucosylated thiotyrosine. In addition,
comparisons of the tridimensional structures and the mechanisms of these original enzymes
will open us powerful synthetic perspectives.
References :
[1] B. Ernst and J. L. Magnani, Nat. Rev. Drug Discovery, 2009, 8, 661-677.
[2] X. Zhu and R. R. Schmidt, Angew. Chem., Int. Ed., 2009, 48, 1900-1934.
[3] J. D. C. Codee, R. Litjens, L. J. van den Bos, H. S. Overkleeft and G. A. van der Marel, Chem.
Soc. Rev., 2005, 34, 769-782.
[4] H. Driguez, Chembiochem, 2001, 2, 311-318.
[5] D. J. Wardrop and S. L. Waidyarachchi, Nat. Prod. Rep., 2010, 27, 1431-1468.
[6] L. Guillotin, P. Lafite and Daniellou, R., Chapter 10 Enzymatic thioglycosylation: current
knowledge and challenges. In Carbohydrate Chemistry: Volume 40, The Royal Society of
Chemistry: 2014; Vol. 40, pp 178-194.
15
CI-19
CI-20
Popular Glycoscience:
Building, Seeing and Playing with Complex Carbohydrates
Interaction of glycosaminoglycans with cytokine biochips
probed by Surface Plasmon Resonance Imaging coupled
with Mass Spectrometry (SPRi-MS)
Serge Pérez
Department of Molecular Pharmacochemistry, CNRS-Univeristé de Grenoble Alpes, Grenoble, France.
Cédric Przybylski1*
1
In two recently published monographs, “A road-map for Glycoscience in Europe” and
“Transforming Glycoscience: A Roadmap for the future” published respectively under the auspices
of the European Science Foundation and the National Academies USA, a selected number of
goals were identified. One of particular importance was the need for “establishment of long term
databases and bio-informatics and computational tools to enable accurate carbohydrate and
glycoconjugate structural predictions”. One of the challenges facing Glycoscience is the
development and implementation of robust and validated informatics toolbox enabling accurate
and fast determination of complex carbohydrate sequences extendable to 3D prediction,
computational modeling, data mining and profiling. The
concomitant expansion of stable and integrated databases,
cross-referenced with popular bioinformatics resources
should contribute to connecting glycomics with other –
omics.
Laboratoire Analyse et Modélisation pour la Biologie et l’Environnement (LAMBE), Université
Evry-Val-d’Essonne, CNRS UMR 8587, Bld François Mitterrand, 91025 EVRY Cedex, France
*
The non-covalent interactions between proteins and anionic polysaccharides such as
glycosaminoglycans (GAGs) are involved in several physio-patholological processes
including cell signalling and recognition, bacterial and viral infections, and cancer
progression. One of the main barriers in understanding the molecular mechanisms involved
in these interactions hold in decoding the structural information contained in GAGs
sequences. This task remains trick especially because of variable level of acetylation,
sulfation, and epimerization hindering further advances of the glycobiology field.[1-4]
Glyco3D (2) features a family of databases
covering the 3D features of mono-, di-, oligo-, polysaccharides,
glycosyltransferases,
lectins,
monoclonal antibodies and glycosaminoglycanbinding proteins. This ensemble offers a unique
opportunity to characterize the 3D features that a
given oligosaccharide can assume in different
environments. A common nomenclature has been
adopted that conforms to the recommendations for
carbohydrates and including the constraints required
by the developing field of glycobiology in terms of
visualization and encoding. A search engine has
been developed that scans the full content of all the data bases for queries related to sequential
information of the carbohydrates or other related descriptors.
To determine featuring parameters of complexes such as stoichiometry, kinetic constants
and structural determinants involved in interaction, several analytical methods such as NMR
and isothermal calorimetry titration can be used.[5] Nonetheless, most of them meet only one
or two of the aforementioned parameters, while requiring extensive analysis times and/or
large volumes/amounts.
During this last decade, biochips technology has experienced an unprecedented
development coinciding with the spreading of the “omics” sciences. These developments
were motivated by the ability to miniaturize and achieve the high-throughput and parallel
screening of thousands of interactions. In glycobiology, biochips are increasingly regarded as
a reliable tool for glycome exploration, study of protein/glycan interaction, and the discovery
of new enzyme activities. Most of the reported glycobiochip approaches required glycan of
pure and defined structures.[6-11] Moreover, such biochips required labelling of one partner
for detection, provided relative data on interaction strength, and failed to allows kinetics
constant determination and ligand identification.
Whereas macromolecular builders are also made available for generating three-dimensional
structures of polysaccharides and complex carbohydrates, there was a clear need to develop a
molecular visualization program that would cope with the uniqueness of the range of carbohydrate
structural features, either alone or in complex environments in particular with proteins and lipids.
To this aim, video game-based computer graphic software (SweetUnityMol (3)) was developed. All
the specific structural features displayed by the simplest to the most complex carbohydratecontaining molecules have been taken into account and can be conveniently depicted. This
concerns the identification of monosaccharides types, conformations, location in single chain or
multiple branched chains, depiction of secondary structural elements and the essential constituting
elements in very complex structures. In all these instances, particular attention was given to cope
with the accepted nomenclature and pictorial representation used in carbohydrate chemistry,
biochemistry and glycobiology. This program closely follows the most accepted symbolic
representations for monosaccharides and existing formats for atomic coordinates and opens the
route to pictorial representation of carbohydrates when studied at the “coarse-grain” level.
To tackle these limitations, we have developed an original platform where interactions of
oligo/polysaccharides with proteins immobilized on biochips are probed by Surface Plasmon
Resonance experiments and further analysed by on-chip mass spectrometry. This strategy
has been successfully applied to the study of cytokine/GAGs interactions.
References:
[1] Gandhi, N.S., Mancera, R.L. Biol. Drug Des., 2008, 72(6): 455-482.
[2] Handel, T.M., Johnson Z., Crown S.E., Lau E.K., Proudfoot, A.E. Annu. Rev. Biochem., 2005,
74385- 74410.
[3] Sasisekharan, R., Raman, R., Prabhakar,V. Annu. Rev. Biomed. Eng., 2006, 8181-8231.
[4] Capila, I., Linhardt, R.J. Angew. Chem., Int. Ed., 2002, 41(3): 390-412.
[5] Harding, S.E., Chowdhry, B.Z., Protein-Ligand interactions Vol. 1 and 2, Oxford University press,
New York, 2001, 354 and 446 pp.
[6] Krishnamoorthy, L., Mahal L. K., ACS Chem. Biol., 2009, 4(9): 715-732.
[7] Paulson, J.C., Blixt, O., Collins B.E. Nat. Chem. Biol., 2006, 2(5): 238-248.
[8] Beloqui, A., Sanchez-Ruiz, A., Martin-Lomas, M., Reichardt, N.C., Chem. Commun., 2012,
48(11): 1701-1703.
[9] Feizi, T., Chai, W. Nat. Rev. Mol. Cell Biol., 2004, 5(7): 582-588.
[10] Fukui, S., Feizi, T., Galustian, C., Lawson, A.M., Chai, W. Nat. Biotechnol., 2002, 20(10): 1011-1017.
References :
[1] http://glycopedia.eu/IMG/pdf/white_paper_feb2015.pdf
[2] Glyco3D. http://www.glyco3D.cermav.cnrs.fr
[3] S. Perez, T. Tubiana, A. Imberty, M. Baaden, Glycobiology, 2015, 25, 483-491.
16
1
Present adress : Institut Parisien de Chimie Moléculaire (IPCM), Université Pierre et Marie Curie,
CNRS UMR 8232, 4 place Jussieu, 75252 PARIS Cedex 05, France
CI-21
1,2-cis-glycosylation: the 2-azido-2-deoxy-D-gluco case
in Heparan Sulfate fragment synthesis
David Bonnaffé 1
1
Institut de Chimie Moléculaire et des Matériaux d'Orsay, UMR 8182
Équipe Méthodologie, Synthèse et Molécules Thérapeutiques, LabEx LERMIT, Univ Paris Sud,
CNRS, Université Paris-Saclay, Orsay, France
Heparan sulfate (HS), the glycan part of proteoglycans found at the cell surface and in the
extracellular matrix, is a negatively charged linear polysaccharide that displays one of the
highest information potential amongst biomolecules. The regulated HS biosynthesis
machinery allows generating up to 48 dp2 units (figure 1) and combining them into selective
docking sites for more than 500 proteins, with the presumed aim to finely regulate and tune
their bioactivities depending on the needs of the cell where they are produced [1]. Within the
exception of the fully characterized heparin/AT-III interaction, involving a specific
pentasaccharide sequence, there is much debate on the mechanisms allowing specific
HS/protein interactions [2]. Chemists have thus a large playground to conceive tools to
challenge hypotheses on HS-protein interactions [3]. However, HS fragment syntheses is not
trivial and one key points in the total synthesis of
HS fragments is to control the 1,2-cis
stereoselectivity of the glycosylation reaction
involving 2-azido-2-deoxy-D-gluco donors. In this
regard, we will discuss how systematic studies of
the influence of donors and acceptors on the
stereochemical outcome of the glycosylation as
well as low temperature NMR experiments can
shed light on this important reaction.
Figure 1: HS theoretical molecular diversity
and D-glucosaminyl-1,2-cis linkage
References :
[1] Xu, J-D. Esko. Annu. Rev. Biochem. 2014, 83, 129–57. U. Lindahl, L. Kjellén. J. Internal Medicine
2013, 273, 555-571.
[2] A. Sarkar A, U-R. Desai. PLoS One 2015, 10, e0141127D. H. Lortat-Jacob, A. Grosdidier, A.
Imberty. Proc. Natl. Acad. Sci. USA. 2002, 99, 1229–1234.
[2] S-B. Dulaney, Y. Xu, P. Wang, G. Tiruchinapally, Z. Wang, J. Kathawa, M-H. El-Dakdouki, B.
Yang, J. Liu, X. Huang . J. Org. Chem. 2015, 80, 12265−12279. Y-P. Hu, Y-Q. Zhong, Z-G. Chen,
C-Y. Chen, Z. Shi, M-M-L. Zulueta, C-C. Ku, P-Y. Lee, C-C. Wang, S-H. Hung. J. Am. Chem. Soc.
2012, 134, 20722–20727. D. Bonnaffé. C. R. Chimie 2011, 14, 29-73. F. Baleux, L. LoureiroMorais, Y. Hersant, P. Clayette, F. Arenzana-Seisdedos, D. Bonnaffé, H. Lortat-Jacob. Nature
Chemical Biology 2009, 5 (10), 743-748. A. Dilhas, R. Lucas, L. Loureiro-Morais, Y. Hersant, D.
Bonnaffé. J. Comb. Chem. 2008, 10, 166–169. A. Lubineau, H. Lortat-Jacob, O. Gavard, S.
Sarrazin, D. Bonnaffé, Chem. Eur.J. 2004, 10, 4265-4282.
17
COMMUNICATIONS ORALES (CO + Duo)
19
Duo-01
CO-01
DUO-O1
Regulation of hepatic Fatty Acid Synthase properties by OGlcNAcylation in vivo and ex vivo
A key pyranose-2-phosphate motif is responsible for both
antibiotic import and quorum-sensing regulation in
Agrobacterium tumefaciens
Baldini Steffi1, Wavelet Cindy1, Anne-Marie Mir1, Marlène Mortuaire1, Hainault Isabelle2,
Postic Catherine2, Guinez Céline3 & Lefebvre Tony1.
Abbas El Sahili1, Si-Zhe Li2, Julien Lang1, Cornelia Virus3, Sara Planamente1, Mohammed
Ahmar2, Beatriz G. Guimaraes4, Magali Aumont-Nicaise1, Armelle Vigouroux1, Laurent
Soulère2, John Reader3, Yves Queneau2, Denis Faure1 & Solange Moréra1
1
CNRS-UMR 8576, Unité de Glycobiologie Structurale et Fonctionnelle (UGSF),
FRABio FR3688 , Villeneuve d'Ascq, France
2
INSERM, U1016, Institut Cochin, Paris, France
3
Unité Environnement Périnatal et santé UPRES EA 4489, IFR 114, Villeneuve d’Ascq, France
1
2
— Prix Bernard Fournet-André Verbert —
Institute for Integrative Biology of the Cell (I2BC), CNRS CEA Univ. Paris-Sud,
Université Paris-Saclay, Avenue de la Terrasse, Gif-sur-Yvette 91198, France
Institut de Chimie et de Biochimie Moléculaires et Supramoléculaires, ICBMS, Université de Lyon,
INSA Lyon, UMR 5246, CNRS, Université Lyon 1, INSA Lyon, CPE-Lyon;
Bât J. Verne, 20 av A. Einstein, 69621 Villeurbanne, France
3
Department of Cell Biology and Physiology, University of North Carolina at Chapel Hill,
Chapel Hill, NC 27599, USA
4
Synchrotron SOLEIL, 91192 Gif sur Yvette, France
During meal intake, two metabolic pathways are activated in the liver, the glycolysis and the
lipogenesis, to drive the production of fatty acids. The Hexosamine Biosynthesis Pathway
(HBP), which end product is UDP-GlcNAc the substrate of OGT (O-GlcNAc Transferase) to
O-GlcNAcylate proteins, is also activated. O-GlcNAcylation is a dynamic post translational
modification (PTM) that controlled a plethora of protein properties. Disturbance in the OGlcNAcylation dynamism is implicated in several pathologies. Numerous studies link
metabolic disorders emergence to O-GlcNAcylation mechanisms deregulation. Knowing that
there is a close relationship between glucose, O-GlcNAcylation levels and activation of the
glucido-lipid metabolism, a link between the activation enzymes and O-GlcNAcylation should
exist. More precisely we focused on Fatty Acid Synthase, FAS which produces fatty acids. In
this study, O-GlcNAcylation levels and FAS expression were analyzed in liver of C57BL6
mice fed a Chow Diet (CD) or High Carbohydrate Diet (HCD), in liver of mice harboring an
inhibition of OGA and in primary hepatocytes of mice cultured in different O-GlcNAcylation
levels. Co-immunoprecipitation experiments showed that OGT and FAS interacted physically
and O-GlcNAcylation plays an essential role on FAS expression and activity. Indeed, a
correlation between FAS expression and O-GlcNAcylation level was shown and an increase
of O-GlcNAcylation levels paralleled the protection of FAS against this degradation,
increasing the interaction between FAS and its deubiquitinylase USP2a (Fig. 1). Moreover
FAS activity was increased in fasted HCD mice compared to fasted CD mice. Taken
together, our results suggest that O-GlcNAcylation may represent indirectly a new regulation
of FAS protein content and activity in liver under both physiological and physiopathological
conditions.
We succeeded in understanding how the periplasmic protein AccA from the pathogen
A. tumefaciens could bind both the plant compound agrocinopine and the antibiotic agrocin
84. Whereas agrocinopine acts as a nutrient and regulatory signal in A. tumefaciens, agrocin
84 is lethal once degraded by the enzyme AccF into a toxic moiety. We identified the
pyranose-2-phosphate-like moiety (arabino for agrocinopine and gluco for agrocin 84) shared
by these two ligands as the key recognition template for AccA. We hypothesized that agrocin
84 will kill all agrobacteria possessing AccA and AccF and that AccA is a gateway allowing
the importation of any compound possessing such a pyranose-2-phosphate motif, and this
was confirmed using new synthetic analogs of agrocinopine specifically prepared.
Furthermore, among these analogs, arabinose-2-phosphate, resulting from the cleavage of
agrocinopine by AccF, was proved, using affinity and in vivo assays, to be the effector of the
transcriptional repressor AccR, which controls quorum-sensing and virulence plasmid
propagation. Overall, through an interdisciplinary approach, we could identify an original and
specific key pyranose-2-phosphate motif that not only allows selective passage of active
compounds into the pathogen cells, but also,
once these compounds are cleaved, keeps to
the matured products their ability to act as
signals. Our work opens up new opportunities
to rationally design novel antibiotics.
Figure 1: recognition of a key pyranose-2phosphate motif in AccA ligand binding site
Reference : El Sahili A, Li SZ, Lang J, Virus C, Planamente S, Ahmar M, Guimaraes BG, AumontNicaise M, Vigouroux A, Soulère L, Reader J, Queneau Y, Faure D, Moréra S. (2015). PLoS
Pathogens 11(8):e1005071.
Figure 1 : Regulation of Fatty Acid Synthase properties by O-GlcNAcylation
21
CO-02
CO-03
Tectonin2 from Laccaria bicolor is designed
for methylated glycans recognition
The MG system as a ligation tool in biological chemistry
Giuliano Cutolo,1 Franziska Reise,2 Jasna Brekalo,1, 2 Pierre-Yves Renard,3
Marie Schuler,1 Thisbe K. Lindhorst2 & Arnaud Tatibouet1
Roman Sommer1, Silvia Bleuer2, Olga N. Makshakova3,4, Alexander Titz1,
Markus Künzler2, & Annabelle Varrot3
1
ICOA-UMR7311, Université d’Orléans, Rue de Chartres, BP6759, 45067 Orléans Cedex 2, France.
2
Otto Diels Institute of Organic Chemistry, Christiana Albertina Univ; of Kiel, D-24098 Kiel, Germany.
3
COBRA UMR 6014 & FR 3038, UNIV Rouen, INSA Rouen, CNRS, IRCOF,
1 Rue Tesnieres, 7682, Mont-Saint-Aignan Cedex, France ;
1
Chemical Biology of Carbohydrates, Helmholtz Institute for Pharmaceutical
Research Saarland (HIPS), D-66123 Saarbrücken, Germany
2
Institute of Microbiology, Swiss Federal Institute of Technology (ETH), 8093 Zürich, Switzerland
3
University Grenoble Alpes, CERMAV-CNRS-UPR5301, F-38000 Grenoble, France
4
present position: Kazan Institute of Biochemistry and Biophysics, Kazan Scientific Center,
Russian Academy of Sciences, 420111 Kazan, Russia
The myrosinase-glucosinolate (MG) tandem is a well-known mechanism of defense in plants,
restricted to species of the order Brassicales.[1,2] This biochemical system is unique in that
myrosinase acts as a thioglucoside glucohydrolase cleaving the anomeric C-S bond of
glucosinolates (GLs) to liberate transient species that spontaneously form isothiocyanates
(ITCs). This reaction sequence generates a toxic, strong electrophile from a stable non-toxic
precursor. Thus, myrosinase-catalysed cleavage of glucosinolates generating
isothiocyanates is orthogonal to other glycosidases as well as classical chemical ligation
methods. We want to explore the myrosinase-glucosinolate (MG) tandem as an
enzymatically driven bioorthogonal ligation system. As a therapeutically relevant target, the
bacterial lectin FimH will be employed to develop the MG reaction as a new methodology for
site-selective bioconjugation of proteins.[3,4]
The tectonin family of lectins has been associated with innate immunity where members
would act as defense effector molecules or recognition factors. Members present multiple
copies of the so-called tectonin domain predicted to form β-propeller structures but
experimental data are scarce. Tectonin2 from the mushroom Laccaria bicolor (Lb-Tect2) is a
nematotoxic lectin that is also able to aglutinate gram-negative bacteria suggesting a role in
fungal defense [2]. These properties depend on the recognition of O-methylated glycans
present on bacterial LPS or nematode cell surface by Lb-Tect2. Thanks to the synthesis of 2O-methyl-methyl-seleno-L-fucopyranoside, its structure could be solved by MAD using the
selenium signal at 1.65 Å. A Lb-Tect2 structure in complex with 4-O-methyl-α-Dmannopyranoside (4MeMan) was also solved at 1.95 Å. Lb-Tect2 forms a highly symmetrical
six-bladed β-propeller. One binding side is found per blade and not at the blade interface like
in many other lectins. The six binding sites present a hydrophobic pocket designed to
accommodate the methyl group. Modelling studies have shown that it would be difficult to kill
the methyl recognition. Lb-tect2 has a unique quaternary arrangement with three molecules
in the bottom and one on the top forming a pseudo three fold axis in the tetramer. This allows
Lb-Tect2 to have a uniform presentation of its 24 binding sites and to be compared to a sea
mine. This explains the better affinity observed for 4MeMan on a surface rather than in
solution and reflects again the importance of lectin multivalency.
Figure 1: Myrosinase-glucosinolate system as a ligation tool
Herein we will disclose the different approaches developed towards the synthesis of these
complex glucosinolates analogues and our first set of ligations.
Figure 1 : Left: Representation of Lb-Tect2 β-propeller fold. Right: zoom on one Lb-Tect2 binding site
References :
[1] Fahey, J. W.; Zalcmann, A. T.; Talalay, P. Phytochemistry 2001, 56, 5-51.
[2] Rollin, P.; Tatibouët, A. C. R. Chimie, 2011, 14, 194-210.
[3] Hartmann, M.; Lindhorst, Th. K. Eur. J. Org. Chem., 2011, 3583-3609.
[4] Patterson, D. M.; Nazarova, L. A.; Prescher, J. A. ACS Chem. Biol. 2014, 9, 592−605.
References :
[1] Varrot A, Basheer SM, Imberty SM. Fungal lectins: Structure, function and potential applications,
Curr Opin Struct Biol, 2013, 23(5): 678-85.
[2] Wohlschlager, T. et al. Methylated glycans as conserved targets of animal and fungal innate
defense. Proc Natl Acad Sci U S A,2014, 111, E2787-96.
22
CO-04
CO-05
Exploration of the lignocellulolytic potential
of invertebrate microbiome
Multivalent iminosugars to modulate glycosidase activity
Yoan Brissonnet, David Deniaud & Sébastien G. Gouin
Université de Nantes, Laboratoire CEISAM, UMR CNRS 62302
2, rue de la Houssinière, BP 92208, 44322Nantes Cedex 3, France
Gregory Arnal1, Pablo Alvira1, Sophie Bozonnet1, Silvia Melgosa-Vidal2,
William G. T. Willats2, Regis Faure1, Bernard Henrissat3, Claire Dumon1
& Michael O’Donohue1
During recent decades, tremendous efforts have been dedicated to designing potent and
selective glycosidase inhibitors. Potential candidates often lack glycosidase selectivity and
the resulting non- specific inhibition generally leads to severe side-effects. Limiting selectivity
issues due to unwanted inhibition of related glycosidases is a challenge not fully achieved
with the first generation of inhibitors.
1.
2.
We explored an alternative strategy to the traditional “lock and key” concept for the design of
glycosidase inhibitors. Iminosugars were grafted in a multiple fashion onto a common
scaffold, potentially to provide cooperative effects, leading to a greater affinity enhancement
with glycosidase targets than predicted from the sum of the constitutive interactions. This
phenomenon, called the “multivalent” or “clustering” effect has been successfully exploited to
design potent inhibitors of carbohydrate-binding proteins (lectins) but has rarely been
investigated for carbohydrate-processing enzymes. In a first systematic study, we observed a
small, but significant clustering effect on jack bean α-mannosidase with a gain in selectivity.1
Since, several research groups have reported synthetic multivalent inhibitors for
glycosidases and glycosyltransferases with strong inhibitory activities.2 The presentation will
be focused on our efforts to rationalize the multivalent inhibition observed.3 Importantly, this
led to the serendipitous discovery that polymeric iminosugars could also activate specific
glycosidases.4 The concept of glycosidase activation is largely unexplored, with a unique
recent example of small-molecules activators of a bacterial O-GlcNAc hydrolase.5 The
possibility of using these polymers as “artificial enzyme effectors” may therefore open up new
perspectives in therapeutics and biocatalysis.
LISBP, Université de Toulouse, CNRS, INRA, INSA, Toulouse, France
Department of Plant Biology and Biotechnology, University of Copenhagen, Denmark
3.
Université Aix Marseille, CNRS, UMR6098, F-13288 Marseille, France.
Biocatalysts are essential for the development of bioeconomy. Recently, a function-based
metagenomic approach from diverse termite gut microbiota revealed hundreds of new
glycoside hydrolases including 63 non-redundant hypothetical glycoside hydrolases (GH) in
the gut of P. militaris, a fungus-growing termite [1]. Most of these enzymes were found to be
encoded by gene clusters or Polysaccharide Utilization Loci (PUL) [2] and many were found
to be multimeric, displaying a variety of modular configurations often combining more than
one catalytic module, with or without CBMs, or modules of unknown function (UNK).
Therefore, faced with this wealth of new sequences, we have deployed a series of so-called
high-throughput methods that have somewhat accelerated steps such as cloning, expression
and characterization of both full-size enzymes and truncated forms thereof. Starting with a
hundred of target sequences, 48 proteins were expressed as soluble protein. A set of
miniaturized assays including sugar-coated microarrays, binding assay and hydrolysis of
chromogenic substrates revealed activity for all the soluble proteins in their full-size or
truncated form (CBM or UNK modules). Enzymes were also shown to complement cellulase
cocktail on complex biomass such as wheat straw and wheat bran. This study revealed
promising biocatalysts such as multimeric xylanases and esterases, and the activity of two
UNK domains were clearly demonstrated.
References :
[1]
[2]
Figure 1 : Polymeric iminosugars can improve glycosidase activity.
References :
[1] Diot, J.; Carcía-Moreno, I.; Gouin, S.G.; Ortiz Mellet, C.; Haupt, K.; Kovensky, J. Org. Biomol.
Chem. 2009, 7, 357-363.
[2] Gouin S.G. Chem. Eur. J. 2014, 20, 11616-11628.
[3] Brissonnet Y., Ortiz-Mellet C., Morandat S., Garcia Moreno I., Deniaud D., Matthews S. E., Vidal
S., El Kirat K., Gouin. S. G.J. Am. Chem. Soc. 2013, 135, 18427-18435.
[4] Brissonnet,Y.; Tezé, D.; Fabre, E.; Deniaud, D.; Daligault, F.; Tellier, C.; Šesták, S.; Ladévèze, S.;
Remaud-Simeon, M.; Potocki- Véronèse, G.; Gouin, S. G. Bioconjugate chem. 2015, 26, 766-772
[5] Darby, J. F.; Landström, J.; Roth, C.; He, Y.; Davies, G. J.; Hubbard, R. E., Angew. Chem. Int.
Ed. 2014, 53, 13419-13423.
23
Bastien, G., et al. (2013) Mining for hemicellulases in the fungus-growing termite
Pseudacanthotermes militaris using functional metagenomics. Biotechnol. Biofuels 6(1):78.
Arnal, G., et al. (2015). Investigating the Function of an Arabinan Utilization Locus Isolated from a
Termite Gut Community. Appl. Environ. Microbiol. 81, 31–39.
CO-06
CO-07
Selective oxidation of free carbohydrates to corresponding
aldonates using gold supported catalysts under
microwave-irradiation
Assembly of a marine exopolysaccharide into microgels
for protein delivery applications
Agata Zykwinska,1 Mélanie Marquis,2 Corinne Sinquin,1
Stéphane Cuenot,3 & Sylvia Colliec-Jouault1
Mehdi Omri 1, Gwladys Pourceau 1, Matthieu Becuwe 2 & Anne Wadouachi 1
1
Laboratoire de Glycochimie, des Antimicrobiens et des Agroressources, UMR 7378 CNRS
2
Laboratoire de Réactivité et Chimie des Solides, UMR CNRS 7314
1
Ifremer, Laboratoire Ecosystèmes Microbiens et Molécules Marines pour les Biotechnologies,
44311 Nantes, France
2
INRA, UR1268 Biopolymères Interactions Assemblages, F-44300 Nantes, France
3
Institut des Matériaux Jean Rouxel (IMN), Université de Nantes-CNRS, 44322 Nantes, France
The useful chemicals prepared from biomass feedstock such as carbohydrates is becoming
more and more attractive to prepare environmentally friendly products used in various fields
(cosmetics, pharmaceutical, medical...). In fact, a variety of high-value products such as
detergents, pharmaceuticals, cosmetics can be easily obtained from carbohydrates by
different chemical modifications (oxidation, hydrogenation, isomerization, glycosylation…).
Among these transformations, selective oxidation of anomeric position of free carbohydrates
is of particular interest since it led to aldonic acids, which are biocompatible and
biodegradable compounds widely used in several areas such as food, paper, cosmetics and
pharmaceutical industries, and important platform chemicals1. Conventional oxidation
methods require the use of homogenous catalysis2 which exhibits several drawbacks such as
separation of the products, environmental toxicity of catalysts or oxidizing reagent, limited
selectivity leading to multiple-step protocols with protection/deprotection steps. These last
are not in accordance with the green chemistry principles. Therefore, the development of
novel oxidation methodologies using reusable heterogeneous catalysts is a very interesting
alternative allowing reducing waste.
Assembly of biopolymers into microgels is an elegant strategy for bioencapsulation with
various potential biomedical applications. Such biocompatible and biodegradable
microassemblies are developed not only to protect the encapsulated molecule but also to
ensure its sustained local delivery. In the present study, an unusual polysaccharide from
marine origin, namely HE800 EPS was structured for the first time using microfluidics in
functional microcarriers that can be used as protein delivery systems.1,2 The significant
advantage of the present delivery system is based on peculiar polysaccharide
glycosaminoglycan (GAG)-like structure and its biological properties, which can both be
explored to create an innovative biomaterial for tissue engineering applications. This highadded value polysaccharide was shown to be able to form microparticles and microfibers,
through physical cross-linking with copper ions, using microfluidics.3 It was shown that the
microparticle morphology could be modulated by the polysaccharide concentration and its
chain length, and that either homogeneous or heterogeneous structures could be obtained. A
model protein, namely Bovine Serum Albumin (BSA) was subsequently encapsulated within
HE800 microparticles in one-step process using microfluidics. The protein release was tuned
by the microparticle morphology with a lower protein amount released from the most
homogeneous structures. Our findings demonstrate the high potential of HE800 EPS based
microassemblies as innovative protein microcarriers for further biomedical applications.
Herein, we report an efficient methodology for selective oxidation of free carbohydrates to
corresponding aldonates using supported gold catalysts combined with hydrogen peroxide
under microwave-irradiation3 . The proposed methodology was applied to several sugars
(monosaccharides or oligosaccharides, neutral or acidic sugars) leading to good to excellent
conversion yields and selectivity to corresponding aldonates. The influence of several
experimental conditions and recyclability of catalyst were investigated.
MW
MOx
References :
Glucose
MOx
Gluconate
1. Senni et al. (2013). Unusual glycosaminoglycans from a deep sea hydrothermal bacterium improve
fibrillar collagen structuring and fibroblast activities in engineered connective tissues. Marine Drugs,
11, 1351-1369.
O2 orH2O2
AuNps
2. Zykwinska et al., (2016). Assembly of HE800 exopolysaccharide produced by a deep-sea
hydrothermal bacterium into microgels for protein delivery applications. Carbohydrate Polymers,
142, 213-221.
MOx
MOx=CeO2,Al2O3,TiO2
Figure 1: D-glucose oxidation using gold supported catalysts under microwave.
3. Marquis et al. (2015). Microfluidics assisted generation of innovative polysaccharide hydrogel
microparticles. Carbohydrate Polymers, 116, 189-199.
References :
[1] H. Hustede, H. J. Haberstroh, E. Schinzig, Ullmann's Encyclopedia of Industrial Chemistry,
6th ed, Wiley-VCH: Weinheim, 2000, vol A 12, 449
[2] S.J. Mantell, P.S. Ford, D.J. Watkin, G.W.J.Fleet, D.Brown. Tetrahedron, 1993, 49, 3343.
[3] M. Omri, G. Pourceau, M. Becuwe, A. Wadouachi ; ACS Sus. Chem. Eng. 2016. In Press
24
CO-08
CO-09
Preparation of New Nanovectors by Synthesis
of Glycerolipidyl and Phosphoramidyl-cyclodextrins
Bacterial synthesis of polysialic acid lactosides in
recombinant Escherichia coli K-12
Véronique Bonnet1, Florian Nolay1, Florence Djedaïni-Pilard1,
Catherine Sarazin,2 Karim El Kirat3 & Sandrine Morandat2
Emeline Richard, Laurine Buon, Sophie Drouillard, Sébastien Fort, & Bernard Priem
Univ. Grenoble Alpes, CERMAV, F-38000 Grenoble, France
1
Laboratoire de Glycochimie des Antimicrobiens et des Agroressources UMR CNRS 7378
Université de Picardie Jules Verne, 33 R. Saint-Leu, 80039 Amiens Cedex
2
Unité Génie Enzymatique et Cellulaire FRE CNRS 3580 UPJV, 33 R. Saint-Leu 80039 Amiens Cedex
3
BMBI UMR 7338 CNRS UTC, Compiègne, France
Polysialic acids are sialic acid based polysaccharides, mostly found in the nervous system
and largely overexpressed on tumour cells1, that confer interesting properties for medical
applications. Polysialic acids are also bacterial capsular polysaccharide, synthesized by
bacterial polysialyltransferases2. These processive enzymes are also known to synthesize in
vitro polysialic acid from disialylated and trisialylated lactosides acceptors3. Here, we present
the engineering of a non-pathogenic Escherichia coli strain, overexpressing recombinant
sialyltransferases and sialic acid synthesis genes, able to perform the bacterial conversion of
an exogenous lactoside into polysialyl lactosides4. Several bacterial polysialyltransferases
encoding genes were assayed for their ability to perform the synthesis of polysialyl lactosides
in the recombinant strains. Fed-batch-cultures allowed us to produce several grams per liter
of α-2,8 polysialic acid and alternate α-2,8-2,9 polysialic acid. Bacterial culture in presence of
propargyl-β-lactoside as exogenous acceptor led to the production of conjugatable
polysaccharides by mean of copper assisted click-chemistry.
Numerous chemical modifications of CD were reported to form safer compounds or new
structures able to self-organize in water. Among CD derivatives, amphiphilic cyclodextrins
which have capacity to form nanoparticles without cosolvent, could be excellent drug delivery
systems [1]. To create a new family of amphiphilic cyclodextrin easily available, the grafting
of esters by lipases catalyzed reactions in non-conventional media was promising. In
previous work, we reported that the reaction of permethylated 6-amino-6-deoxy-βcyclodextrin and vinyl esters catalysed by various lipases without solvent led to acyl
permethylated β-CD [2]. Using vinyl esters, polyenyl-derivatives of cyclodextrins were
obtained and fully characterized [3].
After optimization of enzymatic reaction with few simple substrates, we have worked with 6(glyceryl)-amidosuccinamide-6-deoxy-permethylated β-CD, 6-(1,3-dihydroxy-propionamidyl)6-deoxy-permethylated β-CD and, 6-(2,3-dihydroxy-propionamidyl)-6-deoxy-permethylated
β−CD. The chemo-enzymatic synthesis and the influence of the nature of the cyclodextrins
will be discussed. A second family of amphiphilic cyclodextrin will be presented, the
lipophosphoramidyl cyclodextrins which are synthesized in one step Atherton Todd reaction
from 6-β-alanyl-6-deoxy permethylated β-CD [4]. Potential capacity of these compounds to be
used as nanovectors in therapeutics will be discussed. Studies of preparation and stability of
nanoparticles in water or physiological media will be presented.
O
MeO
OR
H
N
HN
O
OR'
O
O
OMe
OMe
OMeO
OMe
OMeO
OMe
O
O
O
MeO
O
OR
OR'
H
N
HN
OMe
O
Figure 1: Polysialic acid strucure
OMe
6
O
6
R,R' = H, COC 7H 15, COC 17 H35
O
HN
N
H
O
MeO
OMe
OMeO
References :
[1] C. Sato et al: Disialic, oligosialic and polysialic acids: distribution, functions and related disease.
J. Biochem. (2013) 154(2): 115-136.
[2] Steenbergen et al: Functional relationships of the sialyltransferases involved in expression of the
polysialic acid capsules of Escherichia coli K1 and K92 and Neisseria meningitidis groups B or C.
J Biol Chem. (2003) 278:15349-59.
[3] L. Willis et al: Characterization of the α2-8-polysialyltransferase from Neisseria meningitidis with
synthetic acceptors, and the development of a self-priming polysialyltransferase fusion enzyme.
Glycobiology (2008) 18:177-186.
[4] E. Richard et al: Bacterial synthesis of polysialic acid lactosides in recombinant Escherichia coli
K-12. Glycobiology (2016).
OO
P
O
OMe
O
OMe
O
6
This work was supported by Conseil Régional de Picardie under Agroressources Program.
[1] Bonnet V., Gervaise C., Djedaïni-Pilard F., Furlan A., Sarazin C., 2015, Drug Discovery Today, doi
10.1016/j.drudis.2015.05.008.
[2] Favrelle, A.; Bonnet, V.; Sarazin, C.; Djedaıni-Pilard, F. 2007. J Incl Phenom Macrocycl Chem, 57,
15-20., Favrelle, A.; Bonnet, V.; Avondo, C.; Aubry, F.; Djedaïni-Pilard, F.; Sarazin, C. 2010.
Journal of Molecular Catalysis B: Enzymatic, 66, 224-227.
[3] Favrelle, A.; Bonnet, V.; Sarazin, C.; Djedaïni-Pilard, F. 2008. Tetrahedron: Asymmetry, 19, 2240-2245.
[4] Gervaise, C. ; Bonnet, V. ; Wattraint, O.; Aubry, F.; Sarazin, C. ; Jaffrès, P.A. ; Djedaïni-Pilard, F.,
2012. Biochimie, 94,66-74.
25
CO-10
CO-11
Activity and structural characterization of Candida albicans
β-1,2 mannosyltransferase CaBmt3 involved in the
elongation of the cell-wall phosphopeptidomannan
Synthesis and property of N-oxyamide-linked glycoconjugates
Na Chen, Joanne Xie
PPSM, ENS Cachan, CNRS, Université Paris-Saclay, Cachan, 94235 France
Thomas Hurtaux1,2, Ghenima Sfihi-Loualia1, Emeline Fabre1, Florence Delplace1, Coralie Bompard1,
Anaïs Mée3, Sébastien Gouin4, Jean-Maurice Mallet3, Boualem Sendid2 & Yann Guérardel1
Glycoconjugates like glycolipids and glycoproteins are involved in a variety of important
[1]
biological, physiological and pathological processes. Synthesis of glycoconjugate mimics
has attracted increasing research interest for biological and pharmaceutical applications,
[2]
especially in diagnostics, vaccines and therapeutics. Diversely functionalized carbohydrate
building blocks could provide a versatile platform for the generation of carbohydrate mimics
and various conjugates.
1
2
Aminooxy acid derived peptides can easily organize into turns and helices structures through
intramolecular H bond formation, and the N-oxyamide linkage is resistant to chemical and
[3,4]
This unique property makes N-oxyamide linkage attractive for the
enzymatic hydrolysis.
design of new glycoconjugates. Moreover, the oxyamine function could be readily used for
generating libraries of conjugates through chemoselective neoglycosylation with reducing
[5]
[6]
in addition to coupling with carboxylic
sugars, oxime ligation with carbonyl compounds,
acids. Starting from O-glycosyl glycerol, we have developed a methodology for the synthesis
of N-oxyamide-linked glycoglycerolipids, the (2R)- and (2S)-aminooxy analogues of β-O[7-9]
Synthesis, glycolipid assembly with
glucosylserine and N-oxyamide-linked glycopeptides.
gold nanoparticles for receptor targeting imaging and drug delivery will be presented.
Univ. Lille, CNRS, UMR 8576 UGSF Unité de Glycobiologie Structurale et Fonctionnelle, 59000 Lille, France
Univ. Lille, Inserm, CHU Lille, U995 LIRIC Lille Inflammation Research International Center, 59000 Lille, France
3
UMR 7203, Laboratoire des BioMolécules, Ecole Normale Supérieure, 75231 Paris
4
CEISAM, LUNAM Université, UMR CNRS 6230, 44322 Nantes
Candida albicans is a saprophytic yeast found in the flora of the human gastro-intestinal
tract. It can however become pathogenic in immunocompromised individuals and cause
severe infections, especially in a nosocomial environment, associated with high morbidity
and mortality rates. The cell wall of C. albicans, in contact with the host, contains β-1,2
oligomannosides (β-Man) that are linked to several parietal structures such as
phospholipomannans (PLM) and phosphopeptidomannans (PPM). These β-Man are found in
every pathogenic species of Candida and are considered as virulence factors. The
identification of a family of 9 genes coding for β-mannosyltransferases (CaBmt) led to a
better understanding of the role of the enzymes [1]. Out of these, CaBmt1 adds the first βMannosyl residue [2] whereas CaBmt3 adds a second one [3] onto the acid-stable fraction of
the PPM. Characterization of activity and structure of CaBmt3 is underway using
recombinant forms of this enzyme.
Substrate specificity was determined on pyridylamino or mantyl-tagged oligomannosides and
observed with HPLC-fluorometric detection. We established that CaBmt3 requires an
acceptor substrate capped with βMan(1-2)αMan motif to add a single βMan(1-2) residue.
Crystallogenesis screenings and SAXS studies have allowed us first insight in CaBmt
general surface organization. Furthermore, mutagenesis targets identified in silico allowed
the expression in Escherichia coli of enzymes mutated in the active site. This led to a better
understanding of the role of these specific amino acids in the catalytic mechanism of
CaBmt3.In parallel, we have assessed the modulating activities of monovalent and
multivalent iminosugar analogs on CaBmt1 and CaBmt3 in order to control the enzymatic
biosynthesis of β-Man [4].Ultimately, the goal is to develop CaBmt inhibitors in order to
facilitate the struggle against invasive candidiasis.
Figure 1: Structure of glycosyl aminooxy esters and N-oxyamide-linked glycoconjugates
References :
[1] D. Kolarich, B. Lepenies, P. H. Seeberger, Curr. Opin. Chem. Biol. 2012, 16, 214-220
[2] J.E. Hudak, C.R. Bertozzi, Chem. Biol. 2014, 21, 16-37
[3] X. Li, Y.-D. Wu, D. Yang, Acc. Chem. Res. 2008, 41, 1428-1438
[4] F. Chen, B. Ma, Z.-C. Yang, G. Lin, D. Yang, Amino Acids 2012, 43, 499-503.
[5] R.D. Goff, J. S. Thorson, Med. Chem. Commun. 2014, 5, 1036-1047
[6] E.L. Smith, J. P. Giddens, A.T. Iavarone, K. Godula, L.X. Wang, C.R. Bertozzi, Bioconjugate
Chem. 2014, 25, 788-795
[7] N. Chen, J. Xie, J. Org. Chem. 2014, 79, 10716-10721
[8] N. Chen, J. Xie, Org. Biomol. Chem., 2016, 14, 1102-1110
[9] N. Chen, Z.H. Yu, D. Zhou, X.L. Hu, Y. Zang, X.P. He, J. Li, J. Xie, Chem. Commun. 2016, 52, 2284-2287
Figure 1: Schematic representation of CaBmt3 enzymatic reaction
References:
[1] Mille C, et al. (2008), J Biol Chem., 283, 9724-36.
[2] Fabre E, Sfihi-Loualia G, et al. (2014), Biochem. J, 457, 347-360
[3] Sfihi-Loualia G, Hurtaux T, et al. (2016), Glycobiology, 26(2), 203-14
[4] Hurtaux T, Sfihi-Loualia G, et al. (2016), Carbohydr Res. (in press)
26
CO-12
CO-13
Unraveling the multivalent binding
of a marine family 6 carbohydrate-binding module
with its native laminarin ligand
How to tip the balance from hydrolysis toward
transglycosylation: molecular basis in retaining GHs
Bastien Bissaro1, Julien Durand1, Xevi Biarnés2, Tobias Tandrup3, Claire Dumon1, Pierre Monsan1,4,
Leila Lo Leggio3, Antoni Planas2, Sophie Bozonnet1, Michael J. O’Donohue1 & Régis Fauré1
Elizabeth Ficko-Blean1, Murielle Jam1, Aurore Labourel1,
Robert Larocque1, Mirjam Czjzek1 & Gurvan Michel1
1
LISBP, Université de Toulouse, CNRS, INRA, INSA, Toulouse, France
2
Lab. of Biochemistry, Inst.Químic de Sarrià, Univ. Ramon Llull, Via Augusta, 08017 Barcelona, Spain
3
Dept. of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Kbh Ø, Denmark
4
Toulouse White Biotechnology, UMS INRA/INSA 1337, UMS CNRS/INSA 3582,
3 Rue des Satellites, 31400 Toulouse, France
1
Sorbonne Université, UPMC Univ Paris 06, CNRS, UMR 8227, Integrative Biology of Marine
Models, Station Biologique de Roscoff, CS 90074, F-29688, Roscoff cedex, Bretagne, France
Brown macroalgae are important primary producers from the marine ecosystem and a large
proportion of their organic biomass is recycled through the food chain. Laminarin is an
abundant brown algal storage polysaccharide and marine microorganisms, such as Zobellia
galactanivorans, produce laminarinases for its degradation. These laminarinases are often
modular, as is the case with ZgLamC which has an N-terminal GH16 module, a central family
6 carbohydrate-binding module (CBM) and a C-terminal PorSS module. This is the first study
characterizing the interactions between a true marine CBM6 and its natural laminarin ligand.
The crystal structure of ZgLamC_CBM6 indicates that this CBM has two clefts for binding
sugar (Variable loop site, VLS, and concave face site, CFS). The VLS binds in an exomanner and the CFS interacts in an endo manner with laminarin. Isothermal titration
calorimetry experiments confirm that these binding sites have different modes of
recognition for laminarin. Based on the isothermal titration calorimetry data and structural
data we propose a model of ZgLamC_CBM6 interacting with different chains of
laminarin in a multivalent manner, forming a complex cross-linked protein-polysaccharide
network1 (Figure 1).
Transglycosylases (TGs) are scattered among several glycoside hydrolase (GH) families
within the CAZy classification and are almost indistinguishable from their hydrolytic
counterparts, meaning that any given TG is structurally more related to other members of its
CAZy family than to other TGs from other families. For this reason it is a challenge to
understand how these enzymes can perform transglycosylation reactions in aqueous
medium, where the molarity of water is overwhelming, and thus the propensity to perform
hydrolysis is theoretically enormous.[1] Accordingly, considering this lack of rationale, the
design of new TGs using the vast array of GHs as protein templates is extremely difficult,
and thus the development of new tools for chemoenzymatic glycosynthesis is arduous.
In our work, we have used random and semi-rational techniques to engineer two hydrolytic
retaining GHs. This has provided us with two successes that have progressed our
understanding of the TG-GH conundrum and allowed us to make new hypotheses about how
TGs overcome the omnipresence of water. In a first example we created finely-tuned evolved
GH51-based TGs that can be qualified as the first non-Leloir transarabinofuranosylases.
When acting on nitrophenyl-activated donor sugars these enzymes display an almost
exclusive transglycosylating phenotype, transferring the sugar moiety bound in subsite -1 to
carbohydrate acceptors at high yield (up to 80%).[2] Additionally, we engineered a pH-control
feature that provides the means to obtain a perfectly stable product.[3] In a second example,
site-saturation mutagenesis was used to target active site residues in a GH5 endoglycoceramidase. This procured a mutant that is able to transfer cellobiosyl onto aliphatic
diols and alcohols bearing a δ-hydroxyl ketone function, producing functionalized alkyl
cellobiosides in up to 93% yields (unpublished data).
Our achievements and recent analysis of accumulated bibliographic data,[1] now provide us
with a much clearer understanding of how the T/H partition is established in retaining GHs. In
turn, this knowledge allows us to propose rules for the rational design of TGs.
Acknowledgement: The PhD fellowship of B.B. was supported by INRA (CJS). A part of this research
was supported by the project ‘BioSurf - Novel production strategies for biosurfactants’ (ERA-NET grant
no. 0315928A, ERA-IB10.039). Contribution from R.F. was partially supported by the Région MidiPyrénées grant DESR-Recherche 14052246 (CTP-B) and the research mobility grants from INSA
Toulouse (2015). C.D. and R.F. thank the French-Danish Research Collaboration Program (IFD) for a
travel grant.
References :
[1] B. Bissaro, P. Monsan, R. Fauré, M.J. O’Donohue, Biochem. J., 2015, 467(1):17-35
[2] B. Bissaro, J. Durand, X. Biarnés, A. Planas, P. Monsan, M.J. O'Donohue, R. Fauré, ACS Catal.,
2015, 5(8):4598-4611
[3] B. Bissaro, O. Saurel, F. Arab-Jaziri, L. Saulnier, A. Milon, M. Tenkanen, P. Monsan, M.J.
O'Donohue, R. Fauré, BBA-Gen. Subjects, 2014, 1840(1):626-636
Figure 1 : Complex multivalent CBM6 interactions with laminarin polysaccharide
References :
[1] Elizabeth Ficko-Blean, Murielle Jam, Aurore Labourel, Robert Larocque, Mirjam Czjzek, Gurvan
Michel. Unraveling the multivalent binding of a marine family 6 carbohydrate-binding module with
its native laminarin ligand. FEBS Journal, 2016. In press.
27
CO-14
CO-15
Polygalacturonase from Arabidopsis thaliana: to new
enzymes for industrial applications
Chemo-enzymatic synthesis of innovant glycolipids
for cosmetic formulation
Corinne Pau-Roblot1, Olivier Habrylo1, Ludivine Hocq1, Françoise Fournet1,
Michelle Pillon-Lequart1, Jean-Marc Domon1, Catherine Rayon1, Grégory Mouille2,
Aline Voxeur2, Valérie Lefebvre1 & Jérôme Pelloux1
Cédric Peyrot 1,2, Perrine Cancellieri 3, Laure Guillotin1, Pierre Lafite 1,
Ludovic Landemarre 3, Loïc Lemiégre 2 & Richard Daniellou 1
1
2
1
Unité de biologie des plantes et innovation, EA 3900, Université de Picardie Jules Verne,
UFR des sciences, 33 rue saint Leu, 80039 Amiens, France
2
Institut Jean-Pierre Bourgin, UMR1318, INRA-AgroParisTech, ERL3559 CNRS,
INRA Centre de Versailles-Grignon, Route de St-Cyr (RD10), 78026 Versailles Cedex, France
Univ, Orleans, ICOA, UMR 7311, rue de Chartres F-45067 Orléans, France
ENSC-Rennes, Equipe COS, UMR 6226, 11, allée de Beaulieu 35708 Rennes cedex 7, France
3
GLYcoDiag, 520 rue de Chanteloup, 45520 Chevilly
For twenty years, some low molecular weight carbohydrates have emmerged as a new class
of hydrogels. These compounds, such as glycolipids, can create weak intermolecular
interactions to trap a large amount of water. Synthetic methods are expensive, tedious and
generally leads to low yields.This represent an obstacle to their use in cosmetic industry. Our
challenge is to produce glycolipids using environmentally benign methods like enzymatic
reaction. Thanks to protein engineering we are able to produce new biocatalysts to obtain
these glycolipids. The structure of targeted glycolipids will be made up of three distinct parts :
The plant cell wall not only has a structural role in determining the texture and mechanical
properties of plants and their organs. In fact, it also plays a critically role in growth and
differentiation. Indeed, pectins are major components of plant primary cell walls and
constitute a valuable biomass for food and non-food applications but was also shown to be
involved in major events on plant development [1]. Homogalacturonan (HG) is the most
abundant pectic polysaccharide in the primary cell wall of dicotyledons. It can be acetylated
and/or methyl-esterified on specific carbons [1]. The degree of methyl-esterification (DM) and
acetylation (DA) is controlled within the plants by specific enzymes such as pectin
methylesterases (PME) or pectin acetylesterase (PAE) respectively. Changes in DM can
have dramatic consequences on the rheological and chemical properties of the cell wall,
modulating, for instance, the sensitivity of HG to phytopathogens degrading enzymes such
as polygalacturonases (PG). During pathogen infection, action of PG induces cell wall
degradation and promotes colonization of host tissues by pathogens (bacteria and fungi) [2].
So far, substrates specificity and enzymes (PME and PG) mode of action are so far largely
unknown in plants. In order to bring out new potential applications of substrates (medicine,
preventive treatment of crops against pathogens), a better understanding of the relationships
between their structure, modulated via the action of specific enzymes, and their properties is
required.
- a saccharidic part attached thanks to a thioglycoligase, the specificity owing of forming a
thioglycosidic bond, more stable to chemical and enzymatic hydrolysis. The great
structural diversity concerning the sugar part allows us to imagine many different
compounds,
- a linker, mainly in the form of thioarylic derivate, which can be further functionalized in
meta or para position by different functions,
- a fatty chain attached to the linker by esterification or amidation . The length of the chain,
the presence of branching, unsaturation may vary, so as to equilibrate the
hydrophobic/hydrophilic balance essential to obtain a hydrogelator.
Our goal is to develop a new chemo-enzymatic method of glycolipid synthesis, access to
structural diversity and test all the products as new hydrogelator (figure 1).
Using a multidisciplinary approach, we characterised a PG of A. thaliana to explore its
biochemical activity and functions in planta. The enzyme was expressed in P. pastoris as
secreted a protein. After purification by chromatography, the biochemical characterization
was performed, giving new insights into the enzymatic properties of this enzyme.
References :
[1] Wolf S. et al. (2009). Mol. Plant, 2: 851-860.
[2] Shah P. et al. (2009). Proteomics, 9: 3126-3135
Figure 1 : Structural diversity glycolipids targeted
References :
Estroff, L . Hamilton A. D., Chem. Rev, 2004, 104 (3), pp 1201-1218
Guillotin, L., Lafite, P., Daniellou, R., Carbohydr.Chem, 2014, 10 (40) pp 178-194
28
CO-16
Duo-02
Chemical synthesis and development of modified xylosides
as potential inhibitors targeting β4GalT7, a key enzyme
in glycosaminoglycan biosynthesis initiation
Infrared Multiple Photon Dissociation Spectroscopy :
a new powerful technique for structural characterization
of carbohydrates
Samir Dahbi1, Isabelle Bertin-Jung2, Anne Robert2, Jean-Claude Jacquinet1, Sandrine
Gulberti2, Nick Ramalanjaona2, Sylvie Fournel-Gigleux2 & Chrystel Lopin-Bon1
Baptiste Schindler 1, Loic Barnes 1, Abdul-Rahman Allouche 1,
Stéphane Chambert 2 & Isabelle Compagnon 1,3
1
ICOA, UMR 7311 CNRS Université d’Orléans, Pôle de Chimie, Rue de Chartres, 45100 Orléans
IMoPA, UMR 7365 CNRS Université de Lorraine, Biopôle-Campus Biologie Santé, Faculté de
Médecine, 54505 Vandoeuvre-lès-Nancy
2
1
Université de Lyon, F-69622, Lyon, France; Université Lyon 1, Villeurbanne, France; Institut Lumière
Matière,2 UMR5306 Université Lyon 1-CNRS; Université de Lyon 69622 Villeurbanne Cedex, France.
Université de Lyon, F-69622, Lyon, France; Université Lyon 1, Villeurbanne, France.
Laboratoire de Chimie Organique et Bioorganique, INSA Lyon, CNRS, UMR5246, ICBMS,
Bât. J. Verne, 20 Avenue A. Einstein, 69621 Villeurbanne Cedex, France
3
Institut Universitaire de France IUF, 103 Blvd St Michel, 75005 Paris, France
Proteoglycans (PGs) consist of linear anionic polysaccharide chains called
glycosaminoglycans (GAGs), covalently attached to serine residues of a core protein (Figure
1). PGs are localized in extracellular matrix, but also on cell surfaces. Because of their
anionic characteristics and their structural diversity, GAG chains have the ability to interact
with lots of soluble effectors (as growth factors). This property explains their important roles
in cellular processes like migration, proliferation and cell signaling. However, deregulations of
PG metabolism are involved in pathological contexts such as cancer, osteoarticular and
cardiovascular disorders, as well as severe genetic diseases (Ehlers-Danlos syndrome).
We have built an instrument coupling Mass Spectrometry and vibrational spectroscopy
(IRMPD), dedicated to the structural characterization of carbohydrates.
We present the molecular fingerprint obtained by IR spectroscopy as an universal metric to
resolve carbohydrate isomerisms, whereas previously reported hyphenated methods yielded
partial structural information. Using this metric, we can resolve all structural information of
underivatized carbohydrates, including the monosaccharide content, regiochemistry and
stereochemistry of the glycosidic linkages.
With the combination of mass spectrometry sensitivity and spectroscopic structural
resolution, our method requires typical MS conditions, that is small amount of sample,
minimal chemical purification and applies to underivatized analytes, which represents a
major breakthrough in high-throughput analysis of natural carbohydrates. Example of recent
applications include glycosaminoglycanes and chitines.
This instrument is open to external users via the glycophysics network. We expect that
making this new structural tool available to the glycochemistry and glycobiology communities
will foster the full development of glycosciences applications.
Figure 1: Structure and biosynthesis of PGs
Figure 2: Structure of modified xylosides
PG biosynthesis is initiated by the formation of a tetrasaccharide linker
GlcA(β1→3)Gal(β1→3)Gal(β1→4)Xylβ−, which acts as a primer for the elongation of GAG
chains. Among the glycosyltransferases involved, the β1,4-galactosyltransferase 7 (β4GalT7)
catalyses the transfer of the first Gal residue of the linkage region onto the xylose residue.
Because all GAGs share the same initiating tetrasaccharide, β4GalT7 is a key enzyme of
GAG initiation and a prime target for the study of PG biosynthesis to be potentially
investigated for the development of therapeutic agents.
We have previously reported the structure-guided design of inhibitors which target β4GalT7
[1]. In order to study the influence of each of the three positions of the xylose on the inhibitory
potency, we have synthesized a set of 4-methylumbelliferyl β-D-xylopyranosides (4MU-Xyl)
modified at C-2, C-3 or C-4 (Figure 2). These compounds have been tested as substrates
and/or inhibitors of β4GalT7. We have shown that the 2-modified xylosides are not inhibitors,
but poor β4GalT7 substrates. The best inhibitors are 4-modified xylosides, more particularly
the 4-Fluoro-Xyl-MU, which is able to inhibit β4GalT7 in vitro activity and in cellulo GAG
biosynthesis [1].
To summarize, modified xylosides have the ability to impact in vitro galactosyltransferase
activity and to affect GAG synthesis in cells. These compounds that specifically target
β4GalT7, represent valuable chemical-biological tools to explore β4GalT7 active site and to
evaluate the biological consequences of GAG modulation in cellulo. These molecules have
also significant potential towards pharmaceutical and therapeutic applications.
Figure 1 : example of application: spectroscopic elucidation
of isobaric functional modifications of glucosamine
References :
B. Schindler, J.Joshi, A.-R. Allouche, D.Simon, S. Chambert, V.Brites, M.-P. Gaigeot & I. Compagnon.
Distinguishing isobaric phosphated and sulfated carbohydrates by coupling of mass spectrometry with
gas phase vibrational spectroscopy, Phys Chem Chem Phys, 2014, 16, 22131-22138.
References :
[1] M. Saliba, N. Ramalanjaona, S. Gulberti, I. Bertin-Jung, A. Thomas, S. Dahbi, C. Lopin-Bon, J.-C.
Jacquinet, C. Breton, M. Ouzzine, S. Fournel-Gigleux, J. Biol. Chem., 2015, 290, 7658.
29
POSTERS
31
P-02
P-01
Degradation of wood by the Carbohydrate-Active Enzyme
set of the fungus Pycnoporus coccineus
From Carbohydrate-Based Thioimidate N-Oxides to
Iminosugars Derivatives
Marie Couturier 1,2,3,4 David Navarro 1,2,3, Didier Chevret 5, Bernard Henrissat 6,7,8, François
Piumi 1,2,3, Francisco J Ruiz-Dueñas 9, Angel T Martinez 9, Igor V Grigoriev 10, Robert Riley 10,
Anna Lipzen 10, Jean-Guy Berrin 1,2,3, Emma R Master 4 & Marie-Noëlle Rosso 1,2,3
Marie Schuler, Stéphanie Marquès, Domenico Romano,
Maria Domingues & Arnaud Tatibouët 1
1
ICOA-UMR7311, Université d’Orléans, Rue de Chartres, 45067 Orléans, France.
1
Aix Marseille Université, UMR1163 Biodiversité et Biotechnologie Fongiques,
163 avenue de Luminy, F-13288 Marseille, France
2
INRA, UMR1163 Biodiversité et Biotechnologie Fongiques,
163 avenue de Luminy, F-13288 Marseille, France
3
Polytech'Marseille, UMR1163 Biodiversité et Biotechnologie Fongiques,
163 avenue de Luminy, F-13288 Marseille, France
4
Department of Chemical Engineering and Applied Chemistry,
University of Toronto, Toronto, Ontario, Canada
5
INRA, UMR1319 Micalis, Plateforme d’Analyse Protéomique de Paris Sud-Ouest,
78352, Jouy-en-Josas, France
6
Architecture et Fonction des Macromolécules Biologiques (AFMB),
UMR 7257 CNRS, Université Aix-Marseille, 13288 Marseille, France
7
Department of Biological Sciences, King Abdulaziz University, Jeddah, Saudi Arabia
8
INRA, USC 1408 AFMB, 13288 Marseille, France
9
CIB, CSIC, Ramiro de Maeztu 9, E-28040 Madrid, Spain
10
US Department of Energy Joint Genome Institute (JGI), Walnut Creek, California, USA
Our group has recently revealed an unusual thiofunction: the ThioImidate N-Oxide function (TINO).[1]
Encouraged by the synthetic potential of this “thionitrone” analogue, we designed a general method for
the preparation of thioimidate N-oxides (II) with a view to further exploring the potential of this rarely
known functional group. Herein, we would like to report the synthesis of a small library of various
furanose- and pyranose-based thioimidate N-oxides, representatives of both pentoses and
hexoses.[2] Our approach relies on the cyclisation of a suitably functionalised thiohydroximate (I)
either through a halocyclisation reaction (route A) or a nucleophilic substitution (route B). The reactivity
of these novel structures has then been studied, more specifically in pallado-catalysed LiebeskindSrogl cross-couplings, thus giving access to original ketonitrones (III).
White-rot basidiomycete fungi are potent degraders of plant biomass (i.e. lignocellulose)
which is mineralized through the combined action of a wide range of carbohydrate active and
lignin active enzymes[1]. Genomic studies and functional analyses have started to unveil the
enzymatic mechanisms leading to lignocellulose breakdown by fungi, but their ability to
preferentially degrade some substrates is not well understood[2].
The Polyporale fungus Pycnoporus coccineus BRFM310 displays the interesting capability to
grow well on both coniferous and deciduous wood. In the present study we analyzed the
early response of the fungus to softwood (pine) and hardwood (aspen) feedstocks and tested
the effect of the secreted enzymes on lignocellulose deconstruction. To do so, we performed
transcriptomic and proteomic analyses of P. coccineus grown on pine or aspen to identify the
sets of enzymes potentially involved in lignin and polysaccharide degradation. In parallel, the
enzymes were used in wood hydrolysis experiments.
Scheme 1: Synthesis of carbohydrate-based thioimidates N-oxides
These enantiomerically pure backbones constitute valuable intermediates in the synthesis of
polyhydroxylated biologically active compounds, such as novel iminosugars and imino-C-nucleosides.
The combined analyses of soluble sugars and solid residues showed the suitability of P.
coccineus secreted enzymes for softwood degradation[3]. Beyond the variety of CAZymes
identified in its genome, transcriptome and secretome, other parameters such as the
abundance of many proteins of unknown function could be involved in the efficiency of P.
coccineus for softwood conversion.
[1]
[2]
[3]
References:
[1] a) J. Schleiss, D. Cerniauskaite, D. Gueyrard, R. Iori, P. Rollin, A. Tatibouët Synlett 2010, 725-778;
b) J. Schleiss, P. Rollin & A. Tatibouët Angew. Chem. Int. Ed. 2010, 49, 577-580.
[2] S. Marquès, M. Schuler, A. Tatibouët Eur. J. Org. Chem. 2015, 11, 2411-2427.
[3] a) Iminosugars: From Synthesis to Therapeutic Applications (Eds: P. Compain and O.R. Martin),
Wiley-VCH: Weinheim, 2007; b) Stambasky, J.; Hocek, M.; Kocovsky, P. Chem. Rev. 2009, 109,
6729–6764.
Kubicek CP, (2012) The Actors: Plant Biomass Degradation by Fungi, in Fungi and
Lignocellulosic Biomass, Wiley-Blackwell, Oxford, UK.
Blanchette R (1991) Delignification by wood-decay fungi. Ann Rev Phytopath 29: 381-398.
Couturier M et al (2015) Enhanced degradation of softwood versus hardwood by the white-rot
fungus Pycnoporus coccineus. Biotechnol Biofuels 8:216.
33
P-03
P-04
Enzym’n click synthesis of chitinoligosaccharide probes
for plant biology
Subcellular localization of heparan 3-OST2, 3A and 3B
Maxime Delos, François Foulquier, Charles Hellec, Fabrice Allain and Agnès Denys
Arnaud Masselin, Stéphanie Pradeau, Sylvain Cottaz, Sébastien Fort
Structural and Functional Glycobiology Unit, UMR8576 CNRS/USTL, 59655 Villeneuve d’Ascq
CERMAV CNRS, Univ. Grenoble Alpes, 38000 Grenoble, France
Through their ability to interact with many proteins, heparan sulfates (HS) play an important
role in many physiopathological processes. They are composed of repeat dissacharide units,
which can be sulfated in various positions. The reaction of 3-O-sulfation of glucosamine
residues is the last modification in HS moieties, which can be catalyzed by seven 3-O
sulfotransferases (3-OSTs). Each of them is distinct by virtue of its fine substrate specificity
and tissue distribution. Indeed, 3-OST1 is known to generate the HS-binding motif for
antithrombin-III, while 3OST2, 3A, 3B, 4 and 6 generate an HS motif that may serve as an
entry receptor for the gD protein of HSV-1. While 3-OST4 and 3-OST6 are mainly restricted
to embryonic tissues, 3-OST2 is highly expressed in neurons and anti-inflammatory
macrophages, while 3-OST3B is expressed in pro-inflammatory cells [1]. In contrast, 3OST3A has a more ubiquitous distribution. In addition, recent studies have reported a role for
3-OST2, 3A and 3B in tumor progression, but the biological role of 3-O-sulfated HS is not yet
understood. In the general scheme of HS biosynthesis, HS sulfotransferases were
considered as resident enzymes of the Golgi apparatus [2]. However, such a subcellular
localization of 3-OST2, 3A and 3B has not been yet confirmed by experimental approaches.
In this context, we decided to explore the localization of these isoenzymes by using confocal
microscopy. For each enzyme, we constructed fluorescent probes, which correspond to the
red fluorescent protein (RFP) fused to either the full-length enzymes or to the enzymes
deprived of their catalytic domains. As expected, our results showed a restricted localization
of both 3-OST3B constructs in the Golgi apparatus. In contrast, 3-OST3A was found in the
proximity of the plasma membrane, in addition to a normal localization in the Golgi
apparatus. Moreover, 3-OST2 was found in some specific areas in the plasma membrane.
These results suggesting a specific role for these isoforms, we are now investigating a
possible co-localization and/or trafficking of 3-OST3A and 3-OST2 with cell surface HS
proteoglycans. Our first results show 3-OST3A in a close proximity to syndecan-4, while 3OST2 co-localized with syndecan-2. This study will allow to better understand the specific
function of 3-OST isoenzymes in making 3-O-sulfated HS with distinct activities.
Plants have evolved sensitive and intricate mechanisms to discriminate beneficial and
harmful microorganisms via the signals that these microorganisms produce. Such signals
include chitin-related molecules with huge potential for sustainable agriculture, because of
their abilities to enhance plant nutrition and growth, and to incite plants to defend themselves
against pests.
Lipochitinoligosaccharides (LCOs) are symbiotic signals essential for nodulation in legumes.1
They also activate plant root development and stimulate the establishment of the arbuscular
mycorrhizal (AM) symbiosis in leguminous and non leguminous plants.2 Short chain
chitinoligosaccharides CO 3-5, have also recently been described as signal molecules
involved in the AM symbiosis.3 In contrast, long chain chitinoligosaccharides CO 6-8
commonly produced by pathogenic fungi, have long been described as potent elicitors of
plant defence.4, 5
Pure and well-defined chitinoligosaccharides probes are thus required to address the
fundamental biological question of how these closely related molecules can trigger such
different and sometimes contradictory plant responses. Biocatalysis in combination with click
chemistry offers an efficient way to synthesize complex oligosaccharide probes. In this
context we will describe the enzymatic synthesis of short and long chain
chitinoligosaccharides and their chemical modification in aqueous media with conjugatable
groups. The newly synthetic glycoconjugates will provide molecular tools to decipher plantmicrobes communication.
Figure 1 : Enzym’n click synthesis of chitinoligosaccharide probes
References :
[1] Lerouge P, Roche P, Faucher C, Maillet F, Truchet G, Promé JC, Dénarié J (1990) Symbiotic hostspecificity of Rhizobium meliloti is determined by a sulphated and acylated glucosamine
oligosaccharide signal. Nature 344: 781-784
[2] Maillet F, Poinsot V, André O, Puech-Pages V, Haouy A, Gueunier M, Cromer L, Giraudet D,
Formey D, Niebel A, Martinez EA, Driguez H, Bécard G, Dénarié J (2011) Fungal
lipochitooligosaccharide symbiotic signals in arbuscular mycorrhiza. Nature 469: 58-63
[3] Genre A, Chabaud M, Balzergue C, Puech-Pagès V, Novero M, Rey T, Fournier J, Rochange S,
Bécard G, Bonfante P, Barker DG (2013) Short-chain chitin oligomers from arbuscular mycorrhizal
fungi trigger nuclear Ca2+ spiking in Medicago truncatula roots and their production is enhanced by
strigolactone. New Phytologist 198: 190-202
[4] Boller T (1995) Chemoperception of Microbial Signals in Plant Cells. Annu Rev Plant Physiol Plant
Mol Biol 46: 189-214
[5] Shibuya N, Minami E (2001) Oligosaccharide signalling for defence responses in plant.
Physiological and Molecular Plant Pathology 59: 223-233
References :
[1] Martinez P., Denys A., Delos M., Sikora AS., Carpentier M., Julien S., Pestel J. and Allain F.
(2015) Macrophage polarization alters the expression and sulfation pattern of
glycosaminoglycans. Glycobiology 25, 502-13
[2] Pinhal M. A., Smith B., Olson S., Aikawa J., Kimata K. and Esko J. D. (2001). Enzyme
interactions in heparan sulfate biosynthesis: uronosyl 5-epimerase and 2-O-sulfotransferase
interact in vivo, Proc. Natl. Acad. Sci. USA 98, 12984-12989.
34
P-05
P-06
Characterization of Fungal Lytic Polysaccharide
MonoOxygenases
Total synthesis of modified oligosaccharides
from the linkage region of proteoglycans as potential
inhibitors or effectors of the enzyme CSGalNAcT-1
Simon Ladevèze 1,2, Bernard Henrissat 3, & Jean-Guy Berrin 1,2
B. Ayela1, T. Poisson2, X. Pannecoucke2, C. Lopin-Bon1
1
INRA, UMR1163 Biotechnologie des Champignons Filamenteux, 13288 Marseille, France
Aix-Marseille Université, Polytech Marseille, UMR1163 Biotechnologie des Champignons
Filamenteux, 13288 Marseille, France
3
Aix-Marseille Université, UMR7257 Architecture et Fonction des Macromolécules Biologiques,
13288 Marseille, France
1
2
2
Proteoglycans are complex macromolecules which consist of a protein backbone (or core
protein) covalently linked to characteristic linear polysaccharidic chains called
glycosaminoglycans (GAGs). GAGs are natural polysaccharides constituted of a repetitive
disaccharidic unit, and they are implicated in many biological processes such as cell growth
and proliferation. Proteoglycans also appear to be involved in various diseases such as
arthritis, some forms of cancer and even Alzheimer’s disease. Proteoglycan synthetic
[1]
pathways are still not well known and generate a growing interest in fundamental research .
Lignocellulosic biomass is a central resource for biofuel and chemistry industries. In the last
years, biomass recalcitrance, i.e the natural resistance of plant cell wall degradation by
enzymatic processes has undergone striking evolutions. Lytic Polysaccharide
MonoOxygenases (LPMOs), a new class of secreted enzymes were identified as boosters of
biomass deconstruction through the oxidative cleavage of polysaccharides. AA9 LPMOs are
cellulose-active enzymes of fungal origin, of which several members have been
characterized [1]. The yeast Geotrichum candidum, which is readily used in the cheese
industry, is able to grow on wooden boxes of cheese. Some strains have been demonstrated
to be able to degrade filter paper and cotton more efficiently than some industrial enzyme
preparations, primarily due to an efficient GH7 cellobiohydrolase [2]. Recently, comparative
genomics revealed 4 AA9 LPMOs in its genome [3]. Our work presents the first yeast AA9
enzymes characterization, demonstrating the involvement of LPMOs in the ability of G.
candidum to degrade cellulose and xyloglucan. Moreover, the use of Pichia Pastoris as
expression host for these yeast AA9 LPMOs also grant access to higher protein production
yields that can greatly reduce costs and increase the efficiency of the industrial cocktails
used for lignocellulose degradation.
Figure 1 : Biosynthesis of the Proteoglycans
GAG biosynthesis is initiated by the formation of a tetrasaccharide linkage region covalently
linked to serine residues of the PG core protein. CSGalNacT-1, one of the enzymes involved
in the biosynthesis of proteoglycan, initiates the elongation of the GAG as chrondroitin sulfate
chains.
In order to study the influence of the last disaccharide unit (GlcA-Gal) of the tetrasaccharide
linkage on the activity of CSGalNacT-1, we synthetized both natural and chemically modified
disaccharides and trisaccharides. Starting from monosaccharides such as D-glucose and Dgalactose, we were able to quickly have access to a large library of oligosaccharides. These
compounds will be further tested in collaboration with our biologist partners, as potential
acceptors or inhibitors of CSGalNacT-1.
References :
[1]
[2]
[3]
ICOA-UMR 7311, Université d’Orléans, Orléans, France
Université de Normandie, COBRA,UMR 6014 ,FR 3038; Université de Rouen, France
Bennati-Granier C, Garajova S, Champion C, Grisel S, Haon M, Zhou S, Fanuel M, Ropartz D,
Rogniaux H, Gimbert I, Record E, Berrin J-G (2015) Substrate specificity and regioselectivity of
fungal AA9 lytic polysaccharide monooxygenases secreted by Podospora anserina. Biotechnol
Biofuels. doi: 10.1186/s13068-015-0274-3
Borisova AS, Eneyskaya EV, Bobrov KS, Jana S, Logachev A, Polev DE, Lapidus AL, Ibatullin
FM, Saleem U, Sandgren M, Payne CM, Kulminskaya AA, Ståhlberg J (2015) Sequencing,
biochemical characterization, crystal structure and molecular dynamics of cellobiohydrolase
Cel7A from Geotrichum candidum 3C. FEBS J 282:4515–4537. doi: 10.1111/febs.13509
Morel G, Sterck L, Swennen D, Marcet-Houben M, Onesime D, Levasseur A, Jacques N, Mallet
S, Couloux A, Labadie K, Amselem J, Beckerich J-M, Henrissat B, Van de Peer Y, Wincker P,
Souciet J-L, Gabaldón T, Tinsley CR, Casaregola S (2015) Differential gene retention as an
evolutionary mechanism to generate biodiversity and adaptation in yeasts. Sci Rep 5:11571. doi:
10.1038/srep11571
Figure 2 : Synthetic pathway toward the modified oligosaccharides
References :
[1] Aït-Mohand K; Lopin-Bon C; Jacquinet JC; Carbohydrate Res. 2012 353 ; 33-48
35
P-07
P-08
Catalytic aerobic oxidation of reducing sugars
issued from softwood hemicellulose acid hydrolysis
Deciphering the glycosylation changes occurring during
the differentiation and the activation of monocytic THP-1
cell line into macrophages
Yves Queneau 1,3, Elie Derrien,1,2,5, Catherine Pinel,1,2 Michèle Besson,1,2
Mohammed Ahmar,1,3 Emilie Martin-Sisteron,1,4 Guy Raffin,1,4 Philippe Marion5
Clément P. Delannoy1, Yoann Rombouts1, Sophie Groux-Degroote1, Stephanie Holst2,
Bernadette Coddeville1, Anne Harduin-Lepers1, Manfred Wuhrer2,
Elisabeth Elass1 and Yann Guérardel1
1
Université de Lyon, France
IRCELYON, Institut de recherches sur la catalyse et l’environnement de Lyon,
UMR5256 CNRS-Université Lyon1, Villeurbanne 69626
3
INSA Lyon, ICBMS, Institut de Chimie et Biochimie Moléculaires et Supramoléculaires,
UMR5246 CNRS-Université Lyon1,INSA Lyon, CPE Lyon, Villeurbanne 69621
4
ISA, Institut des Sciences Analytiques, UMR 5280 CNRS-Université Lyon1, Villeurbanne 69626
5
SOLVAY Research and Innovation Centre of Lyon, Saint-Fons 69192
1
2
Structural
and Functional Glycobiology Unit, UMR CNRS 8576, Univ. of Lille, 59655 Villeneuve d’Ascq, France
2
Center for Proteomics and Metabolomics, Leiden Univ. Medical Center, 2300 RC Leiden, The Netherlands
Macrophages mediate innate immune system through the initiation and regulation of
inflammation and contribute to adaptive immunity via antigen processing [1]. Cell surface
glycosylation has been widely described to be involved in different physiological or
pathological processes, such as host defense, immunological and inflammatory responses
[2] but much less is known about the variations of glycosylation related to the differentiation
of monocytes into macrophages. Human monocytic cell line THP-1 is frequently used as
macrophage-like models [3], after treatment with phorbol myristate acetate (PMA), allowing
the prediction of both function and behavior of these phagocytes.
Sugars, the primary constituents of cellulose and hemicelluloses polysaccharides in wood
can be recovered from easily depolymerized hemicelluloses by hydrolysis techniques, and
then used for the production of high added-value compounds. In this work, we will report the
catalytic oxidation with air of aldoses released in a softwood hemicellulosic hydrolysate to the
corresponding aldaric acids. Among these sugar-derived diacids, glucaric acid has been
targeted as a “top value-added chemical from biomass” by the US Department of Energy [1].
Aerobic oxidation over supported metallic catalysts has been reported for the aqueous phase
conversion of D-glucose to D-glucaric acid [2,3].
Based on these observations, the aim of this study was to highlight the glycome variation
during the differentiation of the human monocytic THP-1 cell line into macrophages. In this
study, MALDI-TOF data analysis showed that the differentiation of monocytic THP-1 cells
into macrophages induced gangliosides biosynthesis, but also an increase of complex Nglycan and the degree of branching. This data were correlated with the expression pattern of
glycosyltransferases and glycosidases involved in glycan elongation and trimming.
In the other hand, the differentiated THP-1 cells were exposed to inflammatory agents. The
19-kDa lipoprotein, a component of cell-wall of Mycobacterium tuberculosis, has an important
role in the induction of immune response in macrophages. This lipoprotein induces a proinflammatory response through Toll-like receptor 2 [4]. However, nothing is known about the
influence of the 19-kDa lipoprotein on macrophage glycosylation. To investigate the impact of
this lipoprotein, a synthetic lipopeptide has been used to mimic the lipid moiety of the cellwall associated 19-kDa lipoprotein [5]. By treating macrophages with the synthetic
lipopeptide, the N-glycosylation pattern has been impacted. MALDI-TOF data showed that
this cell-wall component of mycobacterium induced a decrease of complex-type N-glycans.
After 2-step hydrolysis of pine wood chips containing mainly galactoglucomannans and some
arabinoglucuronoxylans, the resulting filtrated aqueous stream consisted of ca. 45 g L-1
monosaccharides with a high proportion of mannose (44%), together with glucose (13%),
galactose (15%), xylose (21%), and arabinose (7%). Synthetic solutions of the different
aldoses, separately or in mixture, and the hydrolysate were oxidized with alkaline pH control
over Pt/C ([aldose]0 = 0.25M, aldose/Pt (n/n) = 157, pH 9 (NaOH 10wt.%, T = 60°C, air flow
0.5 L min-1) or in non-neutralized conditions over AuPt bimetallic catalyst ([aldose]0 = 0.25M,
aldose/metal = 40, T= 100°C, air pressure = 40 bar). Precise quantification of the outcome of
the oxidation reactions was made possible by analysis by ionic chromatography with an
amperometric detector and by comparison with authentic aldaric samples; these were either
commercially available, or were prepared from the native monosaccharides by unambiguous
multistep protocols, notably via dimethylamide intermediates [4].
The poster will describe the organic synthesis of the sugar-diacids and will compare the
yields in the different aldaric acids for the different sugar-rich solutions in basic and neutral
conditions.
Figure 1 : Alteration of glycosphingolipids composition of THP-1 cells after PMA-treatment.
References:
[1] Werpy, J. T. and Petersen, G., “Top Value Added Chemicals from Biomass”, US Department of
Energy, Vol. 1, August 2004, pp. 36-38.
[2] Besson, M.; Flèche, G.; Fuertes, P.; Gallezot, P. ; Lahmer, F. Recl. Trav. Chim. Pays-Bas 1996,
115, 217-221.
[3] Murphy, V. J. et al., US 2011/0306790 (2011)
[4] Carpenter, C. A.; Hardcastle, K. I.; Kiely, D. E. Carbohydrate Res. 2013, 376, 29-36.
References :
[1] Gordon, S., and Taylor, P. R. (2005). Nat. Rev. Immunol. 5, 953–964
[2] Ryan, S. O., and Cobb, B. A. (2012). Microbes Infect. 14, 894–903
[3] Auwerx, J. (1991). Experientia 47, 22–31
[4] Sánchez, A et al. (2012). Clin. Dev. Immunol. 2012, 950503
[5] Schromm, A. B. et al. (2010). Innate Immun. 16, 213–225
36
P-09
P-10
Synthesis of putative inhibitors for the human
endosulfatase, H-sulf 2, a new therapeutic target
in cancer and inflammatory diseases
Structural and functional characterization
of a hypothetical new glycoside hydrolase
Barbara Guyez1,2, Franck Moncassin1,2, Claire Raingeval1,2, Sophie Bozonnet 2,
Bernard Henrissat3, Lionel Mourey1, Michael O’Donohue2, Samuel Tranier1 & Claire Dumon2
Mock-Joubert Maxime 1, Christine Le Narvor 1, David Bonnaffé 1 & Romain Vivès 2 .
1
1
Institut de Pharmacologie et de Biologie Structurale, UMR5089 Toulouse
2
LISBP, Université de Toulouse, CNRS, INRA, INSA, Toulouse, France
3
Laboratoire d‘Architecture et Fonction des Macromolécules Biologiques, UMR 7257 Case 932
Equipe Méthodologie, Synthèse, et Molécules Thérapeutiques, Institut de Chimie Moléculaire et des
Materiaux d’Orsay, Université Paris Sud, CNRS, Université Paris-Saclay
2
Groupe Structures et Activités des Glycosaminoglycanes, Institut de Biologie Structurale, CEA Grenoble
Heparan sulphate proteoglycans (HSPGs) interact with many proteins, especially growth
factors or cytokines via specific sulfation patterns, which are due to its highly regulated
biosynthetic machinery. HS can also be remodeled at the cell surface and in the extracellular
matrix by a novel class of extracellular enzymes, the endosulfatases (HSulf 1 and 2), which
selectively remove 6-O-sulfo groups from glucosamine residues within HS. [1-3]
Plant biomass is a renewable and inexhaustible carbon source, and to maximize its
valorization it is necessary to develop new biocatalysts able to hydrolyze efficiently the
cellulose and hemicellulose content [1] [2]. To do so, glycosides hydrolases (GH) are the
biocatalysts of choice. They catalyze hydrolysis of the very stable O-glycosidic bound. To
degrade hemicellulose, microorganisms produce a panel of GH such as xylanases,
xylosidases, or arabinofuranosidases [3].
HSulfs expression/production are deregulated in many human cancers including breast, lung,
ovarian and hepatocarcinoma.[4-5] HSulf-2 is strongly induced in lung squamous cell
carcinoma and lung carcinoma, which are cancers with poor prognosis. Thus, this enzyme
represents an interesting new therapeutic target.
Sulfatases belongs to a rather large family of enzymes and, although many aspects remain
to be clarified concerning their mechanism of action, the amino acid sequences are relatively
conserved, especially the residues involved in the catalysis.[6] Indeed, all these enzymes
seem to share a common catalytic mechanism, which involved a Cα-formylglycine residue
and efficient inhibitors have been designed by replacing the sulfate’s moiety by a sulfamate
function. [7-8]
New potential GHs were discovered from the functional screening of an earthworm gut
metagenomic library. One metagenomic clone active on cellobiose revealed three putative
GH: a GH1, a GH4 and the third one annotated as a hypothetical GH.
This latter putative GH is particularly interesting, because it could not be assigned to any of
the 135 existing GH families of the CAZy database. Here, we describe the structural and
functional characterization of this GH named after GH-star. A large range of substrates was
tested and activity was observed with arabinoxylan and xylooligosaccharides as substrates.
Additionally, X-ray structure of this protein was solved at 1.6Å resolution and even if the
overall folding is very similar to GH5 enzymes, a major difference is the lack of one of the
catalytic residues. Taken together, results suggest that this enzyme could be the first
characterized member of a new Glycoside hydrolase family.
Here, we report the synthesis of potential HSulf inhibitors based on the incorporation of the
sulfamate residue in heparin sulfate fragments. Starting from the trisaccharide A, we
describe the synthesis of compounds B,C.
OH
MeOOC
HO
HO
HO
Ph
O
HCl.H2N
OAc
O
O
BnO
O
O
N3
OH
CF3
All
N3
O
OBn
BnO
O
AcO
O
O
BnO
Ph
O
O
N3 O
OAc
All
O
OBn
NPh
N3
O
MeOOC
A
BnO
O
AcO
O
O
O O
Ph
References :
[1] Himmel, Ding, Johnson, Adney, Nimlos, Brady and Foust (2007). Science, Vol. 315, Issue 5813,
pp. 804-807 DOI: 10.1126
[2] Sticklen (2008). Nature Reviews Genetics 9, 433-443 doi:10.1038/nrg2336
[3] Dumon, Song, Bozonnet, Fauré and O’Donohue (2012). Process Biochemistry. 47 346–357
DOI:10.1016/j.procbio
O
O
BnO
O
O
HO
N3 O
OAc
OBn
B, n = 2
All
N3
O
MeOOC
BnO
O
AcO
S
NH2
O
HO
NaSO3HN O
OSO3Na
O
O
NaOOC
HO
O
n
NaSO3HN
HO
O
NaO3SO
O
Pr
O
n
C, n = 3
References:
[1] A. Seffouh, et al, FASEB J. 2013, 23, 2431-2439.
[2] R. R. Vivès, et al, Front. Oncol. 2014, 3, 331, 1-11.
[3] M. Buono et al, Cell. Mol. Life Sci. 2010, 67, 769-780.
[4] S. Rosen et al, Expert. Opin. Ther. Targets. 2010, 14, 935-949.
[5] X. Zheng et al, Genes Chromosom. Cancer 2013, 52, 225–236.
[6] H. Lemjabbar-Alaoui, Oncogene 2010, 29, 635–646
[7] S. R. Hanson, et al, Angew. Chem. Int. Ed. 2014, 43, 5736–5763.
[8] M. Schelwies, et al, ChemBioChem 2010, 11, 2393–2397
Acknowledgements:
This work was funded by the grant ANR-10-LABX-33 as members of the Laboratory of Excellence
LERMIT
37
P-11
P-12
Preparation of various sulfoforms of oligosaccharides
for the study of proteoglycans biosynthesis
C-type lectins receptors (CLRs) arrays to screen
immunocompatibility and reactivity of biological sample
Hélène Ledru1, Chrystel Lopin-Bon1
1
Silvia Achilli1,2,3, Blanka Didak1,2,3,4, Corinne Vivès1,2,3, Michel Thépaut1,2,3,
Ludovic Landemarre4, Franck Fieschi1,2,3
Institut de Chimie Organique et Analytique (ICOA) – UMR 7311, Université d’Orléans, France
1
Proteoglycans (PGs) are macromolecular glycoproteins composed of glycosaminoglycan
chains (GAGs) covalently linked to L-serine residues. GAGs play important roles in many
biological processes, such as cell growth and proliferation. However they are also involved in
several diseases including arthropathies, Alzeimer’s disease and cancer. Their biosynthesis
involves the action of glycosyltransferases (GTs) and starts with the formation of a
tetrasaccharidic sequence GlcA-β-1,3-Gal-β-1,3-Gal-β-1,4-Xyl-β-O attached to a core protein
(Figure 1). This GAG-linkage region initiates the formation of two types of GAG chains,
heparin/heparan sulfates (Hep/HS) with the addition of α-D-GlcNAc and chondroitin
sulfates/dermatan sulfates (CS/DS) with addition of β-D-GalNAc. During the biosynthesis, the
linkage region may be modified by sulfation on D-Gal units but the role of these substitutions
is not yet fully understood.
Univ. Grenoble Alpes, Inst. de Biologie Structurale, Grenoble, France
2
CNRS, IBS, F-38044, Grenoble, France
3
CEA, IBS, F-38044 Grenoble, France
4
GLYcoDiag, 45067 Orléans, France
Lectins are unique among proteins in that they bind specifically carbohydrates. Among all of
the animal lectins that have been defined, one family include a large group of calcium
dependent carbohydrate-binding molecules, known as C-type lectins receptors (CLRs) [1].
CLRs are largely present at the surface of antigen presenting cells were they play crucial in
the specific recognition of carbohydrate-based PAMPs (pathogens associated molecular
pattern) or DAMPs (danger associated molecular patters). Thus they are directly involved in
the immune activation and adapted response as a function of the situation (immune
activation or tolerance). Indeed, they offer tremendous potential to enhance the efficacy of
vaccines and as therapeutic targets in infectious and non-infectious diseases. However
CLRs functions are still not perfectly understood and critical questions remain, such as how
CLR responses are regulated, how responses from multiple CLRs are integrated [2]. A major
objective would be to use these CLRs as modulators in order to tailor the immune system
response. To do so, molecules selective to each individual CLRs have to be developed.
Here, we produce several recombinant human CLRs in bacteria, in order to test their
interaction with selective carbohydrate immunomodulators and to develop new lead
structures for highly selective glycan based multivalent immunotherapeutics relevant for the
development of cancer, autoimmune diseases and allergy treatment. In order to foster the
identification of CLRS specific ligand we aim to develop a human C-type lectin arrays. In the
present study, performed in collaboration with the company GLYcoDiag (France), preliminary
data of interaction between CLRs and a panel of natural carbohydrates are presented.
Figure 1 : Linkage region of proteoglycans
Our project aims at preparing potential substrates of GTs and particularly of human EXTL3
and CSGalNAcT-1, which orientate the biosynthesis toward Hep/HS or CS/DS chains
respectively. We are currently developing stereo- and regio-controlled syntheses of sulfated
and unsulfated disaccharides (D-GlcA-β-1,3-D-Gal-β) of the linkage region and the
corresponding trisaccharides (transfer products), with the first aminosugar of each GAG
chains (D-GlcNAc or D-GalNAc) (Figure 2).
References:
[1] Elizabeth J. Soilleux ; « DC-SIGN and DC-SIGN R : friend or foe ? » Clinical Science (2003) ; 104 :
437-446
[2] Ivy M. Dambuza and Gordon D. Brown « C-type lectins in immunity : recent developments »,
Current Opinion in Immunology 2015 (32) : 21-27
Moreover we are currently studying methodologies of sulfation with different techniques like
microwaves, flow reactions and chemoenzymatic reactions.
Figure 2 : Various molecules under investigation
38
P-13
P-14
OZO derived iminosugars
The one-pot Retro-Michael/Michael addition solution
Le catabolisme de la paroi mycobactérienne
Alexandre Méry1, Lin Shen1, Albertus Viljoen2, Sydney Villaume3,
Christophe Mariller1, Stéphane Vincent3, Laurent Kremer2 & Yann Guérardel1
Maria Dominguès,1,2 Marie Schuler, 1 Justyna Jaszczyk1, Pierre Lafite1, Richard Daniellou1,
Isabel Ismael,2 Arnaud Tatibouët1
1
2
Univ. Lille, CNRS, UMR8576, UGSF, Unité de Glycobiologie Structurale et Fonctionnelle,
59000 Lille, France
Mycobacterial Pathogenesis and Novel Therapeutic Targets, CNRS-FRE3689, 34000 Montpellier, France
3
Université de Namur, Laboratoire de Chimie Bio-organique, Namur, Belgium
1
Rue de Chartres, BP 6759, Université d'Orléans et CNRS, ICOA, UMR 7311, 45067 Orléans, France
2
Chemistry Department, Textile and Paper Materials Unity, University of Beira Interior,
6200-001 Covilhã, Portugal
1,3-oxazolidine-2-thiones (OZT) are simple heterocycles which have shown various interests
and applications. In stereoselective synthesis, it has been compared to the chiral auxiliary
1,3-oxazolidine-2-one (OZO) of Evans with the main work of Crimmins, but also has shown
various applications in Michael type addition or sulfur transfer reaction.[1-3] This simple
heterocycle could also be found in Nature as the degradation product of glucosinolates and
acts as a biological marker.[4] Over the years, our group developed methods to anchor this
structure on various carbohydrate backbones to study their chemical reactivities and develop
new bioactive molecules.[5] More recently we have explored the chemistry toward
iminosugars analogues of the indolizidine-type structures related to castanospermine. [6]
Over the years two main approaches have been used to introduce an OZT, from a βaminoalcohol with a thionocarbonyl source or directly on reducing sugars by reacting with
thiocyanic acid.
L’Arabinogalactane (AG) est un élément clé de la paroi myctobactérienne,
représentant approximativement 35 % de ses composants totaux. L’AG se distingue
essentiellement par sa structure glycannique unique composée de D-Ara et de L-Gal,
tous deux sous forme furanose. Contrairement à la plupart des polysaccharides
bactériens, l’AG ne possède pas d’unités de répétition mais comprend plutôt des
motifs structuraux bien distincts.
Ce polysaccharide a une fonction essentielle car il permet la connexion entre la
couche des acides mycoliques et la couche interne du peptidoglycane pour former le
complexe mycolyl-arabinogalactane-peptidoglycane (mAGP). De par son importance
cruciale dans le mode de vie des mycobactéries, la compréhension de la
biosynthèse du complexe mAGP a toujours été essentielle pour le développement de
nouvelles cibles médicamenteuses. De plus, de récentes études ont mises en avant
l’existence d’une D-arabinase endogène chez Mycobacterium smegmatis montrant
ainsi que le catabolisme de la paroi mycobactérienne, et plus particulièrement du
mAGP est une voie innovante vers la découverte de nouveaux traitements antituberculeux.
Dans ce contexte, ce projet a pour but de prouver que les mycobactéries peuvent
dégrader leur propre mAGP en se focalisant principalement sur les enzymes
capables de cliver les parties arabinane et galactane de l’AG.
En utilisant la chromatographie ionique couplée à l’analyse par spectrométrie de
masse des produits enzymatiques, nous avons développé un outil pour la détection
des activités glycosidasiques chez les mycobactéries. Pour le moment, cette
méthode est principalement utilisée pour contrôler l’activité endo-D-arabinase afin de
la purifier et de l’identifier. Nous avons également cherché des gènes codant des
glycoside hydrolases en criblant le génome mycobactérien et en concentrant nos
recherches sur l’identification de glycoside hydrolases utilisant le D-Araf et le L-Galf
comme substrats grâce à la base de données CAZY (http:www.cazy.org). Cette
seconde approche nous a permis d’identifier et d’exprimer chez E.coli la protéine
Rv3096 de M. tuberculosis. L’analyse fonctionnelle a montré que cette protéine est
une galactofuranohydrolase dégradant de façon récurrente la chaîne galactane
lorsqu’elle est incubée avec de l’AG.
Nous avons donc développé avec succès une méthodologie simple pour le screening
d’activités glycosidasiques et d’identification d’enzymes. Cela nous a ainsi déjà
permis d’identifier l’activité de la galactofuranohydrolase Rv3096.
Figure 1 : Access to aminal type iminosugars
This last approach has been one of the main stream in our laboratory and we have shown
the possible balance of reactivity of an α-hydroxycarbonyl with thiocyanic acid to the
formation of either an OZT or a 1,3-oxazine-2-thione (OXT). This reactivity led to various
structures depending on the carbohydrate series and the nature of the protecting groups. We
have further explored the potential of these heterocyclic moieties in developing the
transformation to oxazolidine-2-one derivatives and its application using a one-pot retroMichael/Michael type addition to the synthesis of iminosugars, analogues of
deoxynojirimycin.
References:
[1] Han, Y.-Y.; Chen, W.-B.; Han, W.-Y.; Wu, Z.-J.; Zhang, X.-M.; Yuan, W.-C. Org. Lett., 2012, 14
490–3.
[2] Cano, I.; Gomez-Bengoa, E.; Landa, A.; Maestro, M.; Mielgo, A.; Olaizola, I.; Oiarbide, M.; Palomo,
C. Angew. Chem., Int. Ed., 2012, 51, 10856–60.
[3] Munive, L.; Rivas, V.M.; Ortiz, A.; Olivo, H.F. Org. Lett., 2012, 14, 3514–7.
[4] Agerbirk, N.; Olsen, C.E. Phytochemistry, 2015, 115, 143–51.
[5] Simao, A.C.; Rousseau, J.; Silva, S.; Rauter, A.P.; Tatibouët, A.; Rollin, P. Carbohydr. Chem.,
2009, 35, 127–72.
[6] Silva, S.; Sanchez-Fernandez, E.M.; Ortiz Mellet, C.; Tatibouët, A.; Pilar Rauter, A.; Rollin, P. Eur.
J. Org. Chem., 2013, 7941–51.
39
P-15
P-16
Synthesis of glycosides restrained in a 1,4B boat conformation.
Impact on the in vitro activity of the β-N-acetylhexosaminidase C
(O-GlcNAcase) and the intracellular O-GlcNAcylation
levels in human cell lines
Role of heparan sulfate 3-O-sulfotransferases in cancer cell
proliferation and survival
Charles Hellec, Agnès Denys, Maxime Delos, Mathieu Carpentier & Fabrice Allain
Unité de Glycobiologie Structurale et Fonctionnelle, UMR 8576 CNRS, Université des Sciences et
Technologies de Lille, 59655 Villeneuve d’Ascq, France
Anne-Sophie Vercoutter-Edouart1, Olivier Massinon2,
Marlène Mortuaire1, Maïté Leturcq1, Tony Lefebvre1 & Stéphane Vincent2
1
Unité de Glycobiologie Structurale et Fonctionnelle, UGSF, Univ. Lille, CNRS, UMR 8576, Lille, France
2
Unité de Chimie Organique, Université de Namur, Namur, Belgique
Heparan sulfates (HS) are linear and sulfated polysaccharides, for which the sulfation pattern
determines the biological properties. During the polymerization of the chains, several
sulfotransferases transfer sulfate groups at different positions. The last step of HS
biosynthesis is catalyzed by 3-O-sulfotransferases (3-OSTs), which transfer sulfate group to
the OH at the position C3 of glucosamine residues. The 3-OST family is represented by
seven isoenzymes, which trigger different substrate specificities and cell-type specific
expression [1]. The role of 3-OSTs in cancer is still misunderstood. Previous studies reported
that cancer cells do not express 3-OSTs and their ectopic expression reduced cell growth
and survival, suggesting an anti-tumoral activity. However, these findings are contradictory
with recent studies arguing that 3-O-sulfated HS may act as pro-tumoral factors. Indeed, it
was recently demonstrated that overexpression of 3-OST3B and 3-OST2 respectively in
leukemia cells and breast cancer cells promoted cell proliferation and migration, two typical
features of invasive cancer cells [2, 3]. Moreover, 3-OST4, which is normally highly
expressed in embryonic neuronal tissues, is re-expressed in some cancer cells, and this
over-expression correlates with immune escape in vivo [4]. Nevertheless, the underlying
mechanism involving 3-OSTs in tumor growth and expansion remains unknown. Here, we
analyzed the effect of an overexpression of 3-OST2, 3-OST3B and 3-OST4 in MDA-MB-231
and BT-20 cancer cells. We find that the three enzymes efficiently enhanced cell proliferation
and survival, which was related to an increase in the activation of c-Src and Akt.
Furthermore, 3-OST overexpression leads to cell protection against apoptosis induced by
either staurosporin or the combination anti-Fas/TNF-α. These effects are similar for the three
isoenzymes, indicating a general pro-tumoral activity of 3-O-sulfated HS. Taken together, our
findings are supporting a model in which 3-OSTs display pro-tumoral activity, thus
suggesting that an increase in the reaction of HS 3-O-sulfation in cancer cells could be
associated with a bad prognosis.
O-GlcNAcylation is a dynamic and reversible glycosylation on serine and threonine residues of
nuclear, cytoplasmic and mitochondrial proteins. O-GlcNAc cycling is regulated by two single
enzymes: O-GlcNAc Transferase (OGT or UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase) and O-GlcNAcase (OGA or β-N-acetylhexosaminidase, GH84). OGlcNAcylation is involved in the regulation of fundamental cellular processes, including signal
transduction, the cell cycle and proteasomal degradation. Dysregulation of O-GlcNAc levels is
associated with various human diseases, such as diabetes, cancer, neurodegenerative and
cardiovascular diseases [1]. To better understand the molecular and cellular mechanisms
regulated by O-GlcNAc post-translational modification, numerous efforts have been made in the
last few years to develop small-molecules inhibitors targeting OGT or OGA activity. In this way,
and thanks to the elucidation of the mechanism of action of these glycosyl-processing enzymes
at the atomic level and particularly at the transition state [2], we developed a new class of
synthetic GlcNAc analogues restrained in a 1,4B conformation [3].The selectivity of these bicyclic
compounds towards the enzymatic activity of β-N-acetylhexosaminidases was measured in
vitro. We also evaluated the impact of these synthetic glycomimetics on the intracellular OGlcNAc levels, the cell cycle progression and the proliferation rate of normal and cancerous
human cell lines. Although most of them show a moderate inhibition of O-GlcNAcase, these
glycoside analogues may be the leaders of a new class of pharmacological inhibitors for
therapeutical purposes.
Figure: Rational design of glycomimetics locked in a
1,4
References :
[1] Esko JD, Selleck SB. Order out of chaos: assembly of ligand binding sites in heparan sulfate.
Annu. Rev. Biochem. 2002;71:435-71
[2] Zhang L, Song K, Zhou L, et al. Heparan Sulfate D-glucosaminyl 3-O-sulfotransferase-3B1
(HS3ST3B1) promotes angiogenesis and proliferation by induction of VEGF in acute myeloid
leukemia cells. J. Cell. Biochem. 2015 Jun;116(6):1101-12
[3] Vijaya Kumar A, Salem Gassar E, Spillmann D, et al. HS3ST2 modulates breast cancer cell
invasiveness via MAP kinase – and Tcf4 (Tcf7I2)-dependent regulation of protease and cadherin
expression. Int. J. Cancer. 2014 Dec 1;135(11):2579[4] Birrocio A, Cherfils-Vicini J, Augereau A, et al. TRF2 inhibits a cell-extrinsic pathway through
which natural killer cells eliminate cancer cells. Nat. Cell. Biol. 2013 Jul;15(7):818-28
B boat conformation.
References:
[1] Lefebvre T, Issad T. (2015) 30 Years Old: O-GlcNAc Reaches the Age of Reason - Regulation of
Cell Signaling and Metabolism by O-GlcNAcylation. Front Endocrinol (Lausanne), 9;6:17
[2] Macauley MS, Vocadlo DJ. (2010) Increasing O-GlcNAc levels: An overview of small-molecule
inhibitors of O-GlcNAcase. Bioch. Biophys Acta 1800; 107–121.
[3] Thiery E, Reniers J, Wouters J & Vincent SP. (2015) Stereoselective synthesis of boat-locked
glycosides designed as glycosyl hydrolase conformational probes. Eur. J Org. Chem. 7 1472-1484.
40
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P-18
Iminosugars-based macrocycles to deliver
new sweet azacrowns
GLYcoPROFILE® : deciphering the sweet side of cells
Blanka Didak1, Alexiane Decout1, Eric Duverger1 and Ludovic Landemarre1
1
A. Bordes, N. Fontelle, J. Désiré, F. Lecornué, J. Guillard and Y. Blériot
GLYcoDiag, 45520 Chevilly
Institut de Chimie des Milieux et Matériaux de Poitiers (IC2MP),
UMR CNRS 7285, Université de Poitiers, Equipe E5 “Synthèse Organique”,
4 rue Michel Brunet, 86073 Poitiers Cedex
The cell-cell or cell-matrix interactions/communications processes are initiated in the first
time of recognition mainly via specific affinities between a glycan moiety and a carbohydrate
recognition region of a protein or glycoprotein (lectin, glycan receptor). These glycobiological
interactions are involved in a number of key biological phenomena occuring in living
organisms. Indeed, glycobiological interactions drive the key steps of life from the beginning
with the first communication between the two parent cells, to the pathological states with the
expression of specific glycans (“glycobiomarkers”), or during the aging with the change of
some glycan structures (glycosaminoglycans) which allow modifications of their recognition
by glycans receptors. Hence, further studying of those glycans-proteins recognitions could be
of great interest for the discovery of new glycan biomarkers on cells.
Iminosugars, sugar analogs in which the endocyclic oxygen has been replaced by nitrogen,
constitute a major class of sugar mimetics. Their use has been limited to the biological field
so far as these compounds have shown promising therapeutic properties[1]. Interestingly,
their incorporation into macrocycles could deliver innovative scaffolds that could display
chelation properties as well as catalytic potential when bound to metals. For this purpose, an
efficient synthesis of iminosugar C-glycosides[2] displaying two arms at C-5 and C-1 positions
is necessary.
Our last results toward the development of a robust synthesis of six membered iminosugars
C-glycosides using a highly diastereoselective tandem Staudinger-Aza-Wittig reaction will be
presented. The conversion of these structures into unprecedented iminosugar duplexes
displaying various linkages between the two iminosugar units and the preliminary chelation
properties of these iminosugar aza-crowns (ISAC) will be disclosed.
Since the beginning of the 21st century, lectin array technology in increasingly used to
generate relevant information related to glycan motifs, accessibility and a number of other
valuable insights of molecules (purified and non-purified) or cells. GLYcoDiag has developed
a technology platform called GLYcoPROFILE ® intended for the determination of interaction
profiles with lectins or glycans allowing to identify "glycan signatures" on the surface of
molecules or cells .
The nature of cell surface glycans can help to distinguish between cell-types, and for a single
cell type, its glycan signature can vary during growth, differentiation and pathological
transformation. Thus, GLYcoPROFILE® could represent a powerful technology for the
monitoring and characterisation of specific glyco-biomarkers related to cells-type, cells
differentiation state, cells behaviour, cells environment or cells interactions. Thus, primary
cells glyco-signatures under the presence of products (glyco or not) can be connected with
specific glycans signatures. Expression of therapeutic recombinant molecules by cells such
as CHO also induces glycan signature modification that can be used to select a specific
clone (lectin-aided capture) and characterize a productive clone during recombinant protein
production process. Finally, GLYcoPROFILE® technology can be applied to germinal cells
and obtention of specific glycan signature (cell surface glycan accessibility) could open the
way to medical applications such as diagnostics of infertility.
Figure 1: iminosugar-aza-crowns developed in this work
References:
[1] Li, H.; Blériot, Y et al.; Bioorg. Med. Chem. 2009, 17, 5598.
[2] Mondon, M.; Fontelle, N.; Désiré, J.; Lecornué, F.; Guillard, J.; Marrot, J.; Blériot, Y. ; Org. Lett.
2012, 14, 870.
41
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P-20
Structural aspects and membrane binding properties
of MGD1, the major galactolipid synthase in plants
Structural investigation of cell surface assossiated
polysaccharides of Lactobacillus delbrueckii subsp.
bulgaricus 17 as potential substrates for bacteriophage
Ld17 glycerophosphodiesterase
Joana Rocha1, Milène Nitenberg,1 Eric Maréchal2, Agnès Girard-Egrot3,
Maryse Block2 & Christelle Breton1
1
1
2
3
Irina Sadovskaya , Evgeny Vinogradov , Anneleen Cornelissen , Thierry Grard ,
Stéphanie Blangy4.5, Silvia Spinelli4.5, Eoghan Casey3, Jennifer Mahony3,
Jean-Paul Noben6, Fabio Dal Bello7, Christian Cambillau4.5 & Douwe van Sinderen3,8*
1
CERMAV-CNRS, Univ. Grenoble Alpes, Grenoble, France
LPCV, UGA-CEA-CNRS-INRA UMR 5168, Grenoble, France
GEMBAS Team, ICBMS, UMR CNRS 5246, University of Lyon, 69622 Villeurbanne, France
2
1
3
Equipe BPA, Université du Littoral-Côte d’Opale, Institut Régional Charles Violette EA 7394, USC
Anses-ULCO, Bd Bassin Napoléon, BP 120, 62327 Boulogne-sur-mer, France
2
National Research Council, 100 Sussex Dr, K1A 0R6, Ottawa, Canada
3
8
School of Microbiology & APC Microbiome Institute, University College Cork, Cork, Ireland
4
Aix-Marseille Université, Architecture et Fonction des Macromolécules Biologiques,
Campus deLuminy, Marseille, France
5
Centre National de la Recherche Scientifique, Architecture et Fonction des Macromolécules
Biologiques, UMR 6098, Campus de Luminy,Marseille, France
6
Biomedical Research Institute (Biomed) and School of Life Sciences, Transnationale
Universiteit Limburg, Hasselt University, Agoralaan-Building C, BE-3590 Diepenbeek, Belgium
7
Sacco srl, Cadorago, Italy
Galactolipids, such as monogalactosyldiacylglycerol (MGDG) and digalactosyldiacylglycerol
(DGDG), are a unique lipid class ubiquitously found in photosynthetic organisms, from
cyanobacteria to land plants. They constitute the most profuse lipid class on earth and they
are essential for the assembly and function of the photosynthetic apparatus. MGDG
synthesis is catalyzed in a single step by a MGDG synthase (called MGD), which transfers a
galactosyl residue from UDP-galactose to diacylglycerol (DAG). MGD1 is the major
galactolipid synthase in Arabidopsis and is essential for the massive expansion of membrane
thylakoids. It is a monotopic protein localized into the inner envelope membrane of
chloroplasts. Once produced, MGDG is transferred to the outer envelope membrane, where
DGDG synthesis occurs, and to thylakoids.
Bacteriophages are the largest cause of fermentation failure in the dairy industry. The study
of interactions between lactic acid bacteria (LAB), in particular lactobacilli, and their infecting
bacteriophages are the focus of intensive research. The cell surface-associated
polysaccharides (sPSs) of LAB were shown to act as receptors for bacteriophages. In the
current work, we identified three different sPSs of an industrial strain Lb. delbrueckii subsp.
bulgaricus 17 (Ldb17), and established their chemical structure by 2D NMR spectroscopy
and methylation analysis : (1) a neutral branched sPS1, composed of hexasaccharide
repeating units (-[α-D-Glcp-(1-3)-]-4-β-L-Rhap2OAc-4-β-D-Glcp-[α-D-Galp-(1-3)]-4-β-Rhap3-β-D-Galp-), (2) an acidic sPS2, a linear D-galactan with the repeating unit having a
structure (-[Gro-3P-(1-6)-]-3-β-Galf-3-α-Galp-2-β-Galf-6-β-Galf-3-β-Galp-), and (3) short
chain poly(glycerophosphate) teichoic acids. We have shown that the sPS2 is the major
substrate for a glycerophosphodiesterase (GDPD) enzyme, derived from the Lb. delbrueckii
ssp bulgaricus group b bacteriophage 17. Further research will help developing new
strategies to prevent lysis of starter cultures during dairy fermentation.
The catalytic domain of MGD1 has been successfully expressed as an active and soluble
form into E. coli and conditions for activity tests and effects of known positive effectors such
as phosphatidic acid (PA) and phosphatidylglycerol (PG) were reassessed [1]. The crystal
structures of the catalytic domain of MGD1, free and in complex with UDP, have been
recently solved [2]. MGD1 displays the canonical GT-B fold with two distinct Rossmann-type
domains. These structures give insight into residues critical for binding UDP-Gal and clues
for DAG recognition. In addition, we identified a few amino acid residues that are expected to
bind PG. Using a Langmuir membrane model which allows tuning of both lipid composition
and packing, we investigated the membrane binding properties of MGD1 [3]. Interestingly,
MGD1 has a large disordered loop in its N-terminal domain (~50 amino acids) that was
shown to be important for DAG binding.
References:
[1] Rocha et al., (2013) Biochimie, 95, 700-708
[2] Rocha et al., (2016) Plant J., 85, 622-633
[3] Sarkis et al., (2014) FASEB J, 28, 3114-3123
* Published in part: Vinogradov, E., Sadovskaya, I., Cornelissen, A., van Sinderen, D. (2015)
Carbohydr. Res. 413, 93-99
42
P-21
1
P-22
Mutations within a water channel change the balance
between transglycosylation and hydrolysis in Agarase
Synthetic access to MecPP and analogues thereof
using D-galactose as a chiral scaffold
Franck Daligault1, Romain Irague1, Benoît David1, Diane Jouanneau2,
Mirjam Czjzek2, Yves-Henri Sanejouand1 & Charles Tellier1
Marie Buchotte 1, Petra Hellwig 2, Franck Borel 3, Jean-Luc Ferrer 3,
Myriam Seemann 4 & Jean-Bernard Behr 1
1
UFIP, UMR-CNRS 6286, Université de Nantes, 2 rue de la Houssinière, 44322 Nantes, France
2
LBI2M CNRS-UPMC 8287, Station biologique de Roscoff, France
2
Up to now, most mechanistic enzyme studies have focused on the protein sequence and the
impact of the spatial arrangement of aminoacid sidechains on the mechanism. On the other
hand, although the role of hydration in proteins is largely recognized for protein folding,
stability and dynamics, few studies have been dedicated to the hypothesis that water may
have a more direct role in enzymatic catalysis. This later point could indeed prove particulary
important in the case of hydrolysis, since water is also a substrate of the reaction.
Institut de Chimie Moléculaire de Reims, UMR-CNRS 7312, 51687 Reims
Laboratoire de bioelectrochimie et spectroscopie, UMR 7140 CMC, Université de Strasbourg-CNRS,
1 rue Blaise Pascal, 67000 Strasbourg
3
Univ. Grenoble Alpes, CNRS, CEA, IBS, F-38044 Grenoble, France
4
Laboratoire Chimie Biologique et Applications Thérapeutiques, Institut Le Bel, 67070 Strasbourg
The discovery of the methylerythritol phosphate (MEP) pathway in bacteria in the early 90’s
offered new opportunities to overcome the issue of resistance to standard antibiotic
treatment.[1] The MEP pathway is built on seven consecutive enzymatic activities, all of them
being fundamental for bacterial survival. It has been clearly demonstrated that deletion or
inhibition of any of these enzymes in E. coli is lethal for the microorganism. The ANR-project
in which we are involved (Antiobio-T), aims at developing new antibacterial agents with
unprecedented mode of action to enlarge the therapeutic repertoire. To this goal, we wish to
design, synthesize and assay potent inhibitors of GcpE and LytB, the two last enzymes
involved in the MEP pathway (Figure 1). This goes through an accurate knowledge of the
structures and the mode of action of both enzymes, notably through crystallographic
analysis, which requires molecular tools like substrate and substrate analogues in
preparative amount. We present here the synthetic route towards a series of analogues of
MEcPP (the natural substrate for GcpE), which will serve as mechanistic probes in our
investigations. Galactose was used as a building block for the enantioselective synthesis of
the target compounds.
Known for their ability to hydrolyse glycosidic linkages, numerous retaining glycoside
hydrolases are also able to catalyse transglycosylation reaction which can be harnessed for
the synthesis of complex oligosaccharides [1]. Although in the vast majority of cases
hydrolysis prevails over transglycosylation reaction, propensity has already been increased
through mutagenesis and directed evolution experiments [2,3,4]. However, little is known
about the regulation of the balance between both activities.
We discover, via molecular dynamics (MD) simulations, a potential intermittent water channel
connecting the bulk to the active site in a β-agarase belonging to glycoside hydrolases
families GH16 which supports the hypothesis of a possible role of internal water dynamics in
the hydrolytic activity of glycosidases [5,6]. Mutagenesis of specific buried amino acid
residues in the vicinity of these water channels coupled with the biochemical characterization
of the corresponding mutants allowed us to identify four specific residues in the enzyme
involved in the regulation of the activity balance between hydrolysis and transglycosylation.
In this enzyme, two of those functional residues tend to form a bottleneck at the end of the
channel at the interface with the catalytic pocket. Within this context, it is tempting to
speculate that those residues may be involved in controlling water release from the core
channel to the active site, thus regulating the balance between hydrolysis and
transglycosylation in those β-glycosidases.
References:
[1] Bissaro B., Monsan P., Fauré R., and O’Donohue M.J. (2015). Glycosynthesis in a waterworld: new
insight into the molecular basis of transglycosylation in retaining glycoside hydrolases. Biochem. J. 467,
17-35.
[2] Feng H.-Y., Drone J., Hoffmann L., Tran V., Tellier C., Rabiller C., and Dion M. (2005). Converting
a β-glycosidase into a β-transglycosidase by directed evolution. J. Biol. Chem. 280, 37088–37097.
[3] Teze D., Hendrickx J., Czjzek M., Ropartz D., Sanejouand Y.-H., Tran V., Tellier C., and Dion M.
(2014). Semi-rational approach for converting a GH1 β-glycosidase into a β-transglycosidase.
Protein Eng. Des. Sel. 27,13–19.
[4] Teze D., Daligault F., Ferrières V., Sanejouand Y.-H., and Tellier C. (2015). Semi-rational approach
for converting a GH36 α-glycosidase into an α-transglycosidase. Glycobiology 25(4), 420–427.
[5] Hehemann, J.-H., Correc, G., Thomas, F., Bernard, T., Barbeyron, T., Jam, M., Helbert, W., Michel,
G., and Czjzek, M. (2012). Biochemical and structural characterization of the complex agarolytic
enzyme system from the marine bacterium Zobellia galactanivorans. J. Biol. Chem. 287, 30571–30584.
[6] Teze, D., Hendrickx, J., Dion, M., Tellier, C., Woods, V.L., Tran, V., and Sanejouand, Y.-H. (2013).
Conserved water molecules in family 1 glycosidases: a DXMS and molecular dynamics study.
Biochemistry 52, 5900–5910
Figure 1
References :
N. Campos, M. Rodríguez-Concepción, M. Seemann, M. Rohmer & A. Boronat (2001) FEBS Letters,
488, 170; M. Seemann, B. Tse Sum Bui, M. Wolff, D. Tritsch, N. Campos, A. Boronat, A. Marquet & M.
Rohmer (2002) Angew. Chem. Int. Ed. 41, 4337; M. Seemann, K. Janthawornpong, J. Schweizer, L. H.
Böttger, A. Janoschka, A. Ahrens-Botzong, E. Ngouamegne Tambou, O. Rotthaus, A. X. Trautwein, M.
Rohmer & V. Schünemann (2009), J. Am. Chem. Soc., 131, 13184; A. Ahrens-Botzong, K.
Janthawornpong, J. A. Wolny, E. Ngouamegne Tambou, M. Rohmer, S. Krasutsky, C.D. Poulter, V.
Schünemann, M. Seemann (2011), Angew. Chem. Int. Ed. 50, 11976. K. Janthawornpong, S.
Krasutsky, P. Chaignon, M. Rohmer, C.D. Poulter, M. Seemann (2013), J. Am. Chem. Soc. 135, 1816.
Faus, I.; Reinhard, A.; Rackwitz, S.; Wolny, J. A.; Schlage, K.; Wille, H.-C.; Chumakov, A.; Krasutsky,
S.; Chaignon, P.; Poulter, C. D.; et al (2015) Angew. Chem. Int. Ed., 54, 12584.
43
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PAGés platform : a tool for glycan analysis
New nanomolar biphenyl C-mannopyranoside ligands
reveal unprecedented binding modes in the FimH adhesin
of Escherichia coli
Bernadette Coddeville, Yann Guérardel, Frédéric Krzewinski, Emmanuel Maes, Dounia
Mouajjah, Olga Plechakova, Martine Ratajczak, Xavier Trivelli & Nao Yamakawa
Eva-Maria Krammer 1, Emmanuel Maes 1, Nao Yamakawa 1, Jérôme De Ruyck 1, Gérard
Vergoten 1, Stefan Oscarson 2, Mohamed Touaibia 3, René Roy 3, Julie Bouckaert 1
Plateforme PAGés, UGSF, Av. Mendeleiev, Bat C9, Université de Lille 1, 59655 Villeneuve d’Ascq
Established in december of 2012 and supported by a French national scheme for platform
coordination (IBiSA) that assesses national and international standards of analytical quality.
The PAGés platform is expert in glycans analysis whatever their origin. PAGés is located in
the “Unité de Glycobiology Structurale et Fonctionnelle” UMR 8576 at the University of Lille1.
It is composed of nine persons who ensure the continuity of service.
1
Unité Glycobiologie Structurale et Fonctionnelle, UMR8576 CNRS Univ. Lille, 59000 Lille, France
2
Center for Synthesis and Chemical Biology, Univ. College Dublin, Belfield, Dublin 4, Ireland
3
Pharmaqam, Dept of Chemistry, Univ. du Québec, Montréal, Québec, H3C 3P8, Canada
Selective inhibitors for the type-1 fimbrial adhesin FimH are recognized as attractive
alternatives for antibiotic therapies and prophylaxes against acute or recurrent uropathogenic
Escherichia coli infections.
The platform operates on the principle of customers-service and the customer can be
categorized into three groups, from the private sector, from the academic sector or sector
from FraBio federation (“federation of research”) which financially supports the platform. The
collaboration needs to be in form of contract or service delivery. Nevertheless the
establishment of a project file (downloaded on the website) is required before quote the work.
The specificity and affinity of a small comprehensive library of FimH inhibitors including five
different families of mannopyranoside derivatives harboring hydrophobic aglycons was
systematically investigated to derive a set of structure-activity relationships.
The main objective of the platform is to provide an engineering service for private and
academic research in the field of structural analysis of carbohydrate. PAGés is able to afford
glycan mapping of a purified protein and identify the both position and nature of glycan
sequences carried by glycopeptides. It is also able to describe i) the primary structure of
polysaccharides under specific conditions, ii) to analyze complex mixtures and extract
sweetened information (e.g. : milk, serum, freeze-dried products of diverse and various
origins etc ...) iii) offer, under certain conditions, guidance in the development and analysis
strategy. Meanwhile, PAGés is engaged in technological development for example in the
miniaturization and optimization of specific methods to sugars, analyzes strategies,
development of analytical methods in all areas of expertise which are affordable through the
platform.
Functionalities were suitably positioned to fit within the “tyrosine gate” of the FimH
carbohydrate binding site, by amide, sulfamide, thioalkyl or alkyl spacers connected through
a O- or C-glycosidic bond to alpha-D-mannopyranoside.
Alkylated alpha-D-mannosides, that do not contain a sulfur, and those alpha-anomeric Dmannosides coupled via an O-glycosidic linkage with para- and ortho- substituted biphenyl
alkenes were among the most potent ligands described (Kd’s of near 3 nM). Importantly,
alpha-D-mannosides with C-glycosidic linkage showed similar affinity as their O-linked
analogs, with a Kd near 7 nM. This finding is of interest for therapeutical purposes because
C-glycosidic bonds are better resistant to enzymatic degradation.
To carry out its work, the platform has an infrastructure perfectly suited to the analysis of
glycans. Also the location on two laboratories or chemical analyzes and derivations can be
made, it has at its disposal the perfect tools to overcome glycan sequences including mass
spectrometry in different modes and nuclear magnetic resonance with different fields both
available on site or on the technology platforms of the University of Lille. Finally, all
information regarding the platform or work’s requests are available on its website
(plateforme-pages.univ-lille1.fr).
The three-dimensional solution structure of
such a compound has been determined
using NMR: NOESY, TOCSY and
heteronuclear multiple-bond correlation
spectroscopy (HMBC). This conformation
was then docked into the FimH binding site
of crystal structures with different Tyr48 side
chain
conformations.
The
mannose
saccharide makes the usual interactions
and the first phenyl ring stacks with Tyr48.
Remarkably, the second ortho-placed
phenyl ring has pushed out of the way
Tyr48 to take over its interaction with Ile13
at the lower lip of the mannose-binding
pocket.
Binding of anti-adhesive compounds at this
site where large shear-force induced
changes occur, and by the exchange with
the tyrosine 48 side chain, is a mechanism
as yet unexplored in drug discovery of FimH
antagonists of Escherichia coli adhesion.
Figure 1: That we can do for you!
44
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Fluorescent screening of glyco-active compounds
with GlycoFluo technology
Chemical synthesis of multivalent chemical probes
and their study as modulators of multivalent
glycan-protein interactions
Isabelle Bertin-Jung1, Anne Robert1, Sandrine Gulberti1, Chrystel Lopin-Bon2,
Jean-Claude Jacquinet2, Sylvie Fournel-Gigleux1
U. Alali,1 M. Taouai,1 S. Kravchenko,1 C. Epoune,1 D. Arosio,2 A. Bernardi,3 A. Siriwardena1
1
UMR 7365 CNRS-Université de Lorraine - Ingénierie Moléculaire et Physiopathologie Articulaire
(IMoPA) - Groupe MolCelTEG (Molecular, Cellular, Therapeutic Engineering & Glycosyltransferases) Biopôle de l'Université de Lorraine - 54505 Vandoeuvre-lès-Nancy, France
2
UMR CNRS 7311 CNRS - Université d’Orléans - Institut de Chimie Organique et Analytique (ICOA) –
Equipe Glycochimie et protéoglycanes - Rue de Chartres - 45067 Orléans
1
2
GlycoFluo is a new generation of fluorescence-based screening technology for the
identification of bioactive compounds targeting interactions between proteins and
carbohydrates. The involvement of protein-carbohydrate interactions has been indeed
described in many pathophysiological situations, like tumor cell adhesion, cell migration or
host-pathogen recognition. The development of therapeutics targeting these interactions has
lagged behind due, at least in part, to the lack of convenient screening technologies. The
GlycoFluo technology uses a fluorescent probe (a carbohydrate labeled with Nmethylanthranilate, N-MANT) which specifically interacts with the target protein (Figure 1).
This interaction leads to a modification in the probe fluorescence spectrum properties, which
can be measured by direct fluorescence, anisotropy or FRET (Förster / fluorescence
Resonance Energy Transfer).
Fluorescent
function
coupling
Carbohydrate
ofinterest
Fluorescent
dye Interacting
properties
validation
Le Laboratoire de Glycochimie, des Antimicrobiens et des Agroressources (LG2A)
UMR 7378 CNRS,33 Rue St Leu, 30083 Amiens, France
CNR-ISTM MI, c/o Dipartimento di Chimica, Università di Milano, Via C. Golgi,19, 20133Milano, Italy
3
Universita' degli Studi di Milano, Dipartimento di Chimica, via Golgi 19, 20133 Milano, Italy
We have recently demonstrated that simple monosaccharides conjugated to nanodiamond
particles are not only stable to the action of glycosyl hydrolases but inhibit these enzymes
[1]. The present work seeks to investigate the behaviour of glyco-gold nanoparticles (GNPs,
Fig1) towards the hydrolytic action of these same enzymes in the hope of shedding further
light on the unexpected activity of multivalently glycostructures as glycosidase inhibitors.
Bioactive
molecule
+
+
Protein
ofinterest
Figure 1 : Principle of GlycoFluo technology
GlycoFluo represents a low cost, rapid and effective technology, proposing an original
alternative for identifying bioactive molecules targeting carbohydrate-protein interactions.
.
Figure1. The monosaccharide-grafted gold nanoparticles targeted in the present work
Current available services: (i) Available on request: feasibility study of functional analysis
of protein-carbohydrate interactions, including the development of specific fluorescent
ligands targeting the proteins of interest (in collaboration with our partners which are
specialists of chemical synthesis of oligosaccharides-ICOA, Orléans, France); (ii)
Fluorescence-based screening of glycoactive compounds and hit selection; (iii) In vitro
functional characterization of ligands targeting the protein of interest (Kd and Ki
determination)
The required glyco-GNPs have been obtained using the biofunctionalised linker, SAc-TEGUndecene-N3, synthesised adapting a previously developed method [2]. A “click” coupling
has been exploited for the conjugation of propargyl-functionalised monosaccharides to the
linker. The target glyco-GNPs were obtained using the classical route [3].
Latest development of the “Nancy” glycobiology platform:
References:
[1] A. Siriwardena, et al, RSC Adv., 2015, 5, 100568
[2] A. Barrientos, et al., Chem. Eur. J., 2003, 9, 1909
[3] B. V. Enustun and J. Turkevich, J. Am. Chem. Soc., 1963, 85, 3317.
The valorization of GlycoFluo technology is being realized within an integrated platform
dedicated to glycobiology. This platform will propose innovative services in glycobiology,
including glycoactive compounds screening and/or glycan analysis and glycosyltransferase
assays in vitro and in cellulo. The new patented and original GlycoFluo technology
represents an added-value within this platform in terms of carbohydrate-protein interaction
studies and in cellulo analysis of biological effects of bioactive compounds.
Latest services of the “Nancy” glycobiology platform: (i) In cellulo GAG anabolism
evaluation, (ii) Disaccharidic analysis of neo-synthesized GAG chains, (iii)
Glycosyltransferase assays and kinetics.
This work has been supported by Région Lorraine, Fédération de Recherche FR3209 BMCT-CNRS
Université de Lorraine and SATT Grand Est. Patent: Fournel-Gigleux S, Gulberti S, Bertin-Jung I,
Ramalanjaona N, Lopin-Bon C, Jacquinet JC, Ouzzine M. Conjugués glucidiques fluorescents, leur
procédé de préparation et leurs utilisations. Pat2503562fr00. 2014
45
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Infrared Multiple Photon Dissociation Spectroscopy:
a new powerful technique
for structural characterization of carbohydrates
Angiogenesis in hypoxic conditions: implication
of the syndecan-4 ectodomain shedding
Amena Butt1, Hanna Hlawaty1, Oualid Haddad1, Erwan Guyot1,2, Christelle LaguillierMorizot1,2, Carole Planès3,4, Olivier Oudar1, Nathalie Charnaux1,2, Angela Sutton1,2.
Baptiste Schindler 1, Loic Barnes 1, Abdul-Rahman Allouche 1,
Stéphane Chambert 2 & Isabelle Compagnon 1,3
1
1
Université de Lyon, F-69622, Lyon, France; Université Lyon 1, Villeurbanne, France; Institut Lumière
Matière, UMR5306 Université Lyon 1-CNRS; Université de Lyon 69622 Villeurbanne Cedex, France.
2
Université de Lyon, F-69622, Lyon, France; Université Lyon 1, Villeurbanne, France.
Laboratoire de Chimie Organique et Bioorganique, INSA Lyon, CNRS, UMR5246, ICBMS,
Bât. J. Verne, 20 Avenue A. Einstein, 69621 Villeurbanne Cedex, France
3
Institut Universitaire de France IUF, 103 Blvd St Michel, 75005 Paris, France
INSERM U1148, UFR SMBH, Université Paris 13, PRES Paris Sorbonne Cité, Bobigny, France
2
Service de Biochimie, Hôpital Jean Verdier, APHP, Bondy, France
3
EA2363,
UFR SMBH, Université Paris 13, PRES Paris Sorbonne Cité, Bobigny, France
4
Explorations fonctionnelles, Hôpital Avicenne, APHP, Bobigny, France
The atheroma plaques induce vessel obstruction, leading to a reduced blood flow and a local
hypoxia. To counteract this hypoxia, the formation of new blood vessels from pre-existing
ones takes place, this phenomenon being called angiogenesis. Our laboratory demonstrates
that syndecan-4, a heparan sulfate chains proteoglycan, exerts a pro-angiogenic effect [1].
High levels of syndecan-4 in the serum of patients with cardiovascular diseases has been
observed, suggesting a syndecan-4 ectodomain shedding whose role is still undetermined
[2]. The purpose of our work is to assess whether hypoxia induces the shedding of
syndecan-4 and to evaluate the role of the shedded ectodomain in the formation of vascular
networks in vitro. The human umbilical vein endothelial cells (HUVECs) are placed under
hypoxia for 24 hours in 1% O2 or under normoxia in 21% O2. The expression of syndecan-4
is evaluated by qRT-PCR, flow cytometry and western blot. Then, the formation of vascular
networks is studied on a 2D matrigel angiogenesis assay and the syndecan-4 ectodomain
shedding is measured by dot blot using the cell conditioned media. The expression of
metalloproteinases is studied by qRT-PCR and their activity by zymography. The
conditionned media of endothelial cells placed in hypoxia promotes the formation of vascular
networks. Our results demonstrate that hypoxia induces an increase in gene and protein
expression of syndecan-4, as well as its ectodomain shedding. Furthermore, hypoxia
induced the over-expression of MMP2, which could be responsible for syndecan-4
ectodomain shedding. Our results suggest the involvement of syndecan-4 ectodomain
shedding in the vascular networks formation under hypoxia that could be induced by the
MMP2. Ultimately, this issue will increase our knowledge of the mechanisms involved in
angiogenesis and favor to consider new therapeutic strategies for cardiovascular disease.
We have built an instrument coupling mass spectrometry and vibrational spectroscopy
(IRMPD), dedicated to the structural characterization of carbohydrates. We present the
molecular fingerprint obtained by IR spectroscopy as an universal metric to resolve
carbohydrate isomerisms, whereas previously reported hyphenated methods yielded partial
structural information.
With the combination of mass spectrometry sensitivity and spectroscopic structural
resolution, our method requires typical MS conditions that is small amount of sample,
minimal chemical purification and applies to underivatized analytes, which represents a
major breakthrough in high-throughput analysis of natural carbohydrates.
Using this metric, we can resolve all structural information of underivatized carbohydrates,
including position of functional modifications (sulfate in HS/CS disaccharides),
monosaccharide content (in particular the nature of uronic acid in glycosaminoglycans),
regiochemistry and stereochemistry of the glycosidic linkages.
Figure 1: The implication of syndecan-4 shedding in the formation of vascular networks
References :
[1] L. Maillard, N. Saito, H. Hlawaty, V. Friand, N. Suffee, F. Chmilewsky, O. Haddad, C. Laguillier, E.
Guyot, T. Ueyama, O. Oudar, A. Sutton, and N. Charnaux, “RANTES/CCL5 mediated-biological
effects depend on the syndecan-4/PKCα signaling pathway.,” Biol. Open, 3(10), 995-1004, 2014.
[2] T. Kojima, A. Takagi, M. Maeda, T. Segawa, A. Shimizu, K. Yamamoto, T. Matsushita, and H.
Saito, “Plasma Levels of Syndecan-4 (Ryudocan) Are Elevated in Patients with Acute Myocardial
Infarction,” Thromb. Haemost., 85(5), 793-799, 2001.
46
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P-30
Expression of OGT correlates with migration and
proliferation of colon cell lines
Impact of sialic acids on the molecular dynamic
of bi-antennary and tri-antennary glycans
Agata Steenackers1, Vanessa Dehennaut1, Stéphanie Olivier-Van Stichelen1,
Tony Lefebvre1 & Ikram El Yazidi-Belkoura1
Alexandre Guillot1, Manuel Dauchez1,2, Nicolas Belloy1,2, Jessica Jonquet1,2,
Laurent Duca1, Béatrice Romier1, Pascal Maurice1, Laurent Debelle1,
Laurent Martiny1, Vincent Durlach1,3, Sébastien Blaise1, Stéphanie Baud1,2
1
CNRS/UMR 8576, Unit of Structural and Functional Glycobiology (UGSF),
Lille 1 Université, Villeneuve d’Ascq, France
1
The O-GlcNAc transferase (OGT) is a key regulator of the post-translational modification of
proteins by O-linked β-N-acetylglucosamine (O-GlcNAc) onto Ser/Thr residues. OGT uses
the end product of the hexosamine biosynthetic pathway (HBP), UDP-GlcNAc, as a donor for
O-GlcNAcylation processes. It is reported that OGT and O-GlcNAcylation levels are
increased in cancers. We showed that in the colorectal cancers (CRC) cell lines (HT29,
HCT116) the expression of OGT and O-GlcNAcylation level were elevated, and that OGlcNAcylation directly interfered with β-catenin stability and proliferation of cells. Previous
studies showed that oncogenic factors such as p53, MYC or β-catenin are O-GlcNAcylated.
The Wnt/β-catenin pathway is modified in most CRC by genetic alteration of β-catenin or one
member of the destruction complex. Consequently, β-catenin is protected from proteasomal
degradation and therefore induces cell proliferation. A similar observation was made when
HBP flux was increased by culturing cells in high glucose medium. In these conditions, βcatenin was protected against the degradation thus accelerating cell proliferation. In a recent
study, we identified four O-GlcNAcylation sites at the N-terminus of β-catenin, one of those
(T41) localized in the destruction box is crucial for the control of β-catenin degradation. In
that context we studied the effect of OGT silencing in CRC cell lines and non-cancerous cells
CCD841CoN. We reported that silencing of OGT halved proliferative and migratory
capacities of cancer cells. OGT knock-down also diminished cell adhesion corroborating
previous observations that inhibiting O-GlcNAcylation decreases β-catenin/α-catenin
interactions necessary for mucosa integrity, which suggests that O-GlcNAcylation also
affects localization of β-catenin at adherens junction level.
Université de Reims Champagne-Ardenne, UMR CNRS 7369,
Matrice extracellulaire et Dynamique Cellulaire, Reims
2
Plateau de Modélisation Moléculaire Multi-échelle, Reims
3
Pôle Thoracique-Cardio-Neuro-Vasculaire, CHU de Reims
Sialic acids (SA) are monosaccharides that can be located at the terminal position of glycan
chains on a wide range of proteins [1]. The post-translational modifications, such as N-glycan
chains, are fundamental to protein functions. Indeed, the hydrolysis of SA by specific
enzymes such as neuraminidases can lead to drastic modifications of protein behaviour [2] [3].
However, the relationship between desialylation of N-glycan chains and possible alterations
of receptor function remains unexplored. Thus, we aimed to establish the impact of SA
removal from N-glycan chains on their conformational behaviour. We therefore undertook an
in silico investigation using molecular dynamics to predict the structure of an isolated glycan
chain. We performed, for the first time, 500 ns simulations on bi-antennary and tri-antennary
glycan chains displaying or lacking SA. We showed that desialylation alters both the
preferential conformation and the flexibility of the glycan chain. We also developed an
original visualization method allowing to estimate the covered area provided by the glycan on
proteins. With this tool, we showed that the removal of SA causes modifications of the
protein surface protected by the glycan. These results suggest that the dynamic of glycan
chains induced by presence or absence of SA may explain the changes in the protein
function.
Figure: monofucosylated disialylated bi-antennary glycan chain
References:
[1] Schauer, R. Sialic acids as regulators of molecular and cellular interactions. Current Opinion in
Structural Biology 19, 507–514 (2009).
[2] Hinek, A., Bodnaruk, T. D., Bunda, S., Wang, Y. & Liu, K. Neuraminidase-1, a subunit of the cell
surface elastin receptor, desialylates and functionally inactivates adjacent receptors interacting
with the mitogenic growth factors PDGF-BB and IGF-2. Am. J. Pathol. 173, 1042–1056 (2008)
[3] Blaise, S. et al. Elastin-Derived Peptides Are New Regulators of Insulin Resistance Development
in Mice. Diabetes 62, 3807–3816 (2013)
47
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The MCM2-7 helicase complex is glycosylated by OGlcNAc Transferase. Towards a new role of OGT in the
regulation of DNA replication
Iminosugar-Based Galactoside Mimics as Pharmacological
Chaperones for Lysosomal β-Galactosidases
Estelle Gallienne 1, Anna Biela-Banas 1, Sophie Front 1 & Olivier R. Martin 1
1
Maïté Leturcq, Marlène Mortuaire, Tony Lefebvre, Anne-Sophie Vercoutter-Edouart
Unité de Glycobiologie Structurale et Fonctionnelle, UGSF, Univ. Lille,
CNRS, UMR 8576, Lille, France
ICOA, Université d’Orléans & CNRS, Orléans, France
As part of our research program dedicated to the design of new iminosugars as therapeutic
agents for lysosomal storage disorders (LSD), we synthesized iminosugar-based galactoside
mimics as pharmacological chaperones (PCs) for lysosomal β-galactosidases, responsible
for GM1-gangliosidosis, Morquio B and Krabbe diseases. Pharmacological chaperone
therapy is a new and innovative strategy, which consists in the administration at very low
concentrations of small molecules having strong interactions with the enzyme. These
compounds, which are paradoxically potent inhibitors of the glycosidase involved, help
stabilize the mutant protein and save it from degradation.[1] This results in an increased
enzymatic activity in the lysosome and a concomitant decrease of the symptoms.
O-GlcNAcylation (O-linked N-acetylglucosaminylation) is a dynamic and reversible posttranslational modification regulated by OGT (O-GlcNAc Transferase) and OGA (OGlcNAcase). This glycosylation consists in the addition of a single residue of β-D-Nacetylglucosamine (GlcNAc) to the hydroxyl group of serine and threonine residues of
cytosolic, nuclear and mitochondrial proteins and can compete with phosphorylation to
regulate the activity of target-proteins [1]. Several works, including those of our lab, showed
that a disruption of the dynamic of O-GlcNAcylation affects mitotic events and cellular
division. In addition, overexpression of OGT and increase of its activity contribute to
tumorigenesis by promoting growth and invasion of cancer cells, both in vitro and in vivo [2].
We previously described for the first time the cell cycle-dependent O-GlcNAcylation of the
Mini-Chromosome Maintenance Proteins MCM2, MCM3, MCM6 and MCM7 which are key
proteins involved in the formation of the pre-replicative complex [3]. The aim of our work is
now to understand the role of O-GlcNAcylation and OGT on the formation of the MCM2-7
complex and its recruitment to the chromatin. By WGA affinity chromatography and clickchemistry approaches, we showed that the O-GlcNAcylated forms of MCM are mainly
detected in the chromatin-bound protein fraction. Co-immunoprecipitation and GST pull-down
experiments further showed that OGT preferentially interacts with some of the MCM proteins.
Finally, we are currently investigating the crosstalk between phosphorylation and OGlcNAcylation of the MCM proteins by using two-dimensional electrophoresis and westernblotting combined with Click-chemistry strategy. This study will bring new elements to
understand the role of OGT and O-GlcNAc modification in the molecular mechanisms
involved in the initiation of DNA synthesis. The question remains whether a pathological
dysregulation of O-GlcNAc status of the MCM2-7 complex could disrupt the control of the
initiation of the genome replication and thus contribute to the uncontrolled proliferation of
cancerous cells.
Given our very promising results in the design of 1-C-alkyl imino-D-xylitols as PCs for βglucocerebrosidase,[2] the enzyme involved in Gaucher disease, we turned our efforts to the
synthesis of 1-C-alkyl imino-L-arabinitols such as 1,[3] which were found to be deprived of
inhibitory activity against the three tested lysosomal galactosidases.[4] The challenging
synthesis of 1-C-alkyl imino-D-galactitols of type 2 [5] was then investigated leading to potent
inhibitors of lysosomal α-galactosidase A, responsible for Fabry disease.[4] As 1-Niminosugars are known to preferably inhibit β-glycosidases, 4-epi-isofagomine 3 was
synthesized and evaluated towards lysosomal galactosidases. It was found to be a potent
inhibitor of lysosomal β-galactosidase and the first iminosugar reported to inhibit the βgalactocerebrosidase, the enzyme involved in Krabbe disease, a devastating neurological
LSD.[4] In order to test the influence of an alkyl chain on the inhibitory properties, 1-C- and 5C-alkyl-iminoribitols 4a and 4b, as simplified alkylated analogs of 3, were synthesized and
tested against various galactosidases.[6] Results of this evaluation and further perspectives
will be described in this communication.
( )4
( )4
Galactoside
References:
[1] Lefebvre T, Issad T. (2015) 30 Years Old: O-GlcNAc Reaches the Age of Reason - Regulation of
Cell Signaling and Metabolism by O-GlcNAcylation. Front Endocrinol (Lausanne), 9;6:17
[2] Ma Z, Vosseller K. (2014) Cancer metabolism and elevated O-GlcNAc in oncogenic signaling. J
Biol Chem. 289(50):34457-65.
[3] Drougat L, Olivier-Van Stichelen S, Mortuaire M, Foulquier F, Lacoste AS, Michalski JC, Lefebvre
T, Vercoutter-Edouart AS. (2012) Characterization of O-GlcNAc cycling and proteomic identification
of differentially O-GlcNAcylated proteins during G1/S transition. Biochim Biophys Acta,
1820(12):1839-48.
1
2
3
4a
4b
Figure 1: Iminosugar-based galactoside mimics
References:
[1] J.-Q. Fan, Biol. Chem. 2008, 389, 1-11.
[2] W. Schönemann, E. Gallienne, K. Ikeda-Obatake, N. Asano, S. Nakagawa, A. Kato, I. Adachi,
M. Górecki, J. Frelek, O.R. Martin, ChemMedChem 2013, 8, 1805-1817.
[3] A. Biela, F. Oulaïdi, E. Gallienne, M. Górecki, J. Frelek, O. R. Martin, Tetrahedron 2013, 69,
3348-3354.
[4] A. Biela-Banaś, F. Oulaïdi, S. Front, E. Gallienne, K. Ikeda-Obatake, N. Asano, D. A. Wenger,
O.R. Martin, ChemMedChem 2014, 9, 2647-2652.
[5] A. Biela-Banaś, E. Gallienne, S. Front, O. R. Martin, Tetrahedron Lett. 2014, 55, 838-841.
[6] S. Front, E. Gallienne, J. Charollais-Thoenig, S. Demotz, O.R. Martin, ChemMedChem 2016, 11,
133-141.
48
P-33
P-34
Deciphering the complex alginolytic system
of the marine bacterium Zobellia galactanivorans
Anti-Metastatic Properties of a Marine Bacterial
Exopolysaccharide-Based Derivative Designed
to Mimic Glycosaminoglycans
François Thomas 1, Robert Larocque 2, Yongtao Zhu 3, Mark J. McBride 3,
Tristan Barbeyron 1, Mirjam Czjzek 1 & Gurvan Michel 1
Dominique Heymann 1, Carmen Ruiz-Velasco 1, Julie Chesneau 1,
Jacqueline Ratiskol 2, Corinne Sinquin 2 & Sylvia Colliec-Jouault 2
1
Sorbonne Université, UPMC, CNRS, UMR 8227, Integrative Biology of Marine Models,
Station Biologique de Roscoff, Roscoff, France
2
FR2424 CNRS, Station Biologique de Roscoff, Roscoff, France
3
Department of Biological Sciences, University of Wisconsin-Milwaukee, Milwaukee, USA
1
INSERM, UMR 957, Laboratoire de Physiopathologie de la Résorption Osseuse et Thérapie des
Tumeurs Osseuses Primitives, Equipe Ligue Contre le Cancer 2012, Nantes 44035, France
2
3
IFREMER, Laboratoire EM B Ecosystèmes Microbiens et Molécules Marines pour les Biotechnologies,
Centre Atlantique, BP21105, Nantes 44311, France
Osteosarcoma is the most frequent malignant primary bone tumor characterized by a high
potency to form lung metastases.
The marine flavobacterium Zobellia galactanivorans is able to degrade a great variety of
polysaccharides from marine macroalgae, and to use them as carbon and energy sources. In
this study, we have focused on the degradation of alginate. This main cell wall
polysaccharide from brown algae consists of β-D-mannuronate (M) and α-L-guluronate (G)
monomers and is widely used as gelling agent in industrial applications. Z. galactanivorans
possesses a complex alginolytic system, comprising 12 degradation enzymes, three import
proteins and a regulation factor. The majority of these proteins are encoded within two
operons conserved in other heterotrophic bacteria and their expression is induced by the
presence of alginate [1]. Z. galactanivorans possesses notably seven alginate lyases (2 PL6,
3 PL7, 1 PL14 and 1 PL17), questioning their potential redundancy or synergistic action. To
elucidate their functions, we therefore cloned the seven genes and obtained recombinant
proteins for biochemical and structural characterization. In-depth study of the alginate lyases
AlyA1 and AlyA5 showed that although belonging to the same PL7 family, they displayed
drastically different modes of action. Namely, AlyA1 is an endolytic guluronate lyase,
whereas AlyA5 cleaves monomers from the non-reducing end of oligo-alginates in an
exolytic fashion. Crystal structures revealed a common jelly-roll fold for the two enzymes.
However, additional loops in AlyA5 obstruct the cleft and create a pocket topology
contrasting with that of AlyA1, thus explaining the different modes of action [2]. Genetic tools
have been recently developed for Z. galactanivorans in collaboration with Dr McBride’s group
and, to further decipher the biological role of AlyA1, a first deletion mutant (ΔalyA1) has been
obtained. Compared to the wild type strain, ΔalyA1 showed a strong growth delay on gelified
alginate and an impaired liquefaction efficiency. Interestingly, among the seven alginate
lyases in the system, AlyA1 was the only one containing a carbohydrate binding module
(CBM) and found secreted in the medium. Therefore, it might be a crucial enzyme to initiate
the degradation pathway of alginate when present in the context of an algal cell wall.
Characterization of the other alginate lyases is underway and will help decipher this complex
catabolic system.
In this study, the effect of three oversulfated low molecular weight marine bacterial
exopolysaccharides (OS-EPS) with different molecular weights (4, 8 and 15 kDa) were first
evaluated in vitro on human and murine osteosarcoma cell lines. Different biological activities
were studied: cell proliferation, cell adhesion and migration, matrix metalloproteinase
expression. This in vitro study showed that only the OS-EPS 15 kDa derivative could inhibit the
invasiveness of osteosarcoma cells with an inhibition rate close to 90%. Moreover, this
derivative was potent to inhibit both migration and invasiveness of osteosarcoma cell lines; had
no significant effect on their cell cycle; and increased slightly the expression of MMP-9, and
more highly the expression of its physiological specific tissue inhibitor TIMP-1. Then, the in vivo
experiments showed that the OS-EPS 15 kDa derivative had no effect on the primary
osteosarcoma tumor induced by osteosarcoma cell lines but was very efficient to inhibit the
establishment of lung metastases in vivo.
These results can help to better understand the mechanisms of GAGs and GAG-like derivatives
in the biology of the tumor cells and their interactions with the bone environment to develop new
therapeutic strategies.
Figure 1 : Effect of OS-EPS 15
kDa derivative on the lung
metastatic incidence: (A)
metastatic incidence in treated
animals (OS-EPS derivative or
heparin; s.c. 6 mg/kg daily) vs.
control; (B) histological analyses
of the lung tissue of treated
animals or not (* metastatic foci)
and (C) survival rate (%) of
treated animals (OS-EPS
derivative or heparin) vs.
control. ** p < 0.01.
References :
[1] Thomas, F. et al. Characterization of the first alginolytic operons in a marine bacterium: from their
emergence in marine Flavobacteriia to their independent transfers to marine Proteobacteria and
human gut Bacteroides. Environ. Microbiol. 14, 2379-94 (2012).
[2] Thomas, F. et al. Comparative characterization of two marine alginate lyases from Zobellia
galactanivorans reveals distinct modes of action and exquisite adaptation to their natural
substrate. J. Biol. Chem. 288, 23021-37 (2013).
49
P-35
P-36
Structural and Functional Studies of a Trehalulose
Hydrolase MutA from Rhizobium sp.
B3GALT6 mutations causes a pleiotropic form of Ehlers-Danlos
syndrome (EDS) due defects in glycosaminoglycan biosynthesis
Xiaomeng Pang1, Anne Robert1, Isabelle Bertin-Jung1, Tim Van Damme2,
Fransiska Malfait2, Sandrine Gulberti1, Sylvie Fournel-Gigleux1
1
Alexandra Lipski1, Sébastien Violot1, Hildegard Watzlawick2, Richard Haser1,
Ralf Mattes2 & Nushin Aghajari1
UMR 7365 CNRS-Univ. Lorraine, MolCelTEG group, Biopôle de l'Université de Lorraine, 54505 Vandoeuvre-lès2
Nancy, France ; Center for Medical Genetics, Ghent Univ. Hospital, De Pintelaan 185, 9000 Gent, Belgium
1
Laboratory for Biocrystallography and Structural Biology of Therapeutic Targets, Molecular
Microbiology and Structural Biochemistry, CNRS and University of Lyon 1, UMR 5086,
7 passage du Vercors, F-69367 Lyon Cedex 07, France
2
Universität Stuttgart, Institut für Industrielle Genetik, Allmandring 31, D-70569 Stuttgart, Germany
Introduction: Proteoglycans (PGs) are major components of cell plasma membranes and
extracellular matrices (ECM). These complex macromolecules play important
pathophysiological roles in the organization of ECM of connective tissues as well as in cell
signaling and embryonic and post-natal development. PGs are composed of
glycosaminoglycan (GAG) chains covalently attached to a core protein through a
tetrasaccharide linkage [Glucuronic acid-β1,3-Galactose-β1,3-Galactose-β1,4-Xylose-β1-O-].
The addition of the third residue (galactose) is catalyzed by β1,3-galactosyltransferase 6
(β3GalT6), a key glycosyltransferase in GAG initiation [1]. Recently, mutations of β3GalT6
have been associated to a pleiotropic form of Ehlers-Danlos Syndrome (EDS), a severe
connective tissue disorder characterized by skin and bone fragility, musculoskeletal
malformations, delayed wound healing, joint hyperlaxity and intellectual disabilities [2; 3].
Objective and strategy: The objective of this work is to understand the consequences of
β3GalT6 defects in the development of EDS clinical symptoms, starting with evaluation of
GAG anabolism and cell migration in patient dermal fibroblasts. β3GalT6 gain- and loss-offunction studies have been conducted to better decipher the implication of this
galactosyltransferase in EDS pathophysiology.
Experimental methods: GAG anabolism has been determined by quantifying incorporation
of a radiolabelled precursor (35S) in neosynthesized GAG chains in patient fibroblasts or
control cells. Fibroblast migration has been evaluated by wound healing tests. Over
expression of β3GalT6 in defective cells has been carried out by electroporation of B3GALT6
cDNA in patient fibroblasts. The evaluation of GAG anabolism and cell migration in the
genetically modified cells has been performed as described above.
Main results: β3GalT6 defective fibroblasts exhibited a marked reduction in GAG anabolism.
An impaired glycanation of decorin core protein was also observed in patient cells,
confirming that the GAG defect is due to β3GalT6 loss of function. In vitro wound healing
tests revealed a significant delay in defective fibroblast migration compared to control cells,
which possibly explains some phenotypic aspects of the disease, such as defective wound
closure in relation to GAG defect. The impact of mutations (point mutations, deletions) will be
discussed in terms of GAG anabolism and cell migration, in attempt to establish a possible
correlation between β3GalT6 loss of function in patient cells and the severity of clinical symptoms.
Overexpression of wild-type β3GalT6 has been conducted in patient defective cells. Enzyme
expression is stable up to 72h after electroporation in genetically modified cells. Interestingly,
GAG anabolism and cell migration were partially restored (around 30%) when β3GalT6 is
overexpressed in patient fibroblasts, which could be the starting point to the development of
therapeutic strategies including gene therapy and enzyme replacement therapy.
Conclusions: This work has shown that β3GalT6 is a key glycosyltransferase in GAG
initiation. Mutations of this galactosyltransferase are responsible for a unique combination of
severe generalized symptoms in EDS, characterized by important connective tissue
disorders. This work provides a better understanding of the crucial role of β3GalT6 in EDS
pathophysiological process, more precisely, in terms of GAG anabolism and cell migration.
Trehalulose (α-D-glucopyranosyl-1,1-D-fructose) is one of the natural occurring isomers of
sucrose (α-D-glucopyranosyl-1,2-β-D-fructofuranoside) and is found in honey and sugar cane
in small amount. This disaccharide possesses physical and organoleptic properties similar to
sucrose. The production of trehalulose by Rhizobium sp. from sucrose is catalyzed by
sucrose isomerases (SI), namely by the trehalulose synthase (TS), MutB. Recently, an
adjacent TS homologous gene, mutA, encoding a hydrolytic enzyme was identified
(Watzlawick & Mattes, 2009). This enzyme catalyzes the hydrolysis of trehalulose,
isomaltulose (α-D-glucopyranosyl-1,6-D-fructose), and sucrose into glucose and fructose,
with a highest activity on trehalulose. The enzyme MutA belongs to the GH13 family and
possesses the common characteristics found in this family. The genes mutA and mutB are
putatively responsible for the uptake and utilization of trehalulose and isomaltulose in the
bacterium and could possibly be involved in transcriptional regulation. Gene regulation is
essential for prokaryotes to increase versatility and adaptability regulation of transcription, an
issue necessary for the cell to adapt rapidly to the changes in the outer environment as eg.
stress, and the availability of nutrients. We have crystallized and solved the threedimensional structure of MutA to 2.5 Å resolution, and functional studies have been carried
out as well for this enzyme. Comparative studies with SIs SmuA (isomaltulose synthase)
(Ravaud et al., 2009) and MutB (trehalulose synthase) (Ravaud et al., 2007), with
Saccharomyces cerevisiae isomaltase (Yamamoto et al., 2010; 2012) and with Bacillus
cereus oligo-1,6-glucosidase OGL (Watanabe et al., 1997) have been performed and show
overall structural similarity to these enzymes. The atypical form of the active site of MutA
seems to be important for substrate hydrolysis and minor transferase activity. Based on
primary- and tertiary structure analysis, four active (P232F, F266A, F290A and F266AF290A) and two inactive mutants (D210N and E264Q) were generated in order to gain a
better understanding of the structure/function/activity relationships of these enzymes. MutA is
the first enzyme described as being able to hydrolyse trehalulose, and could potentially find
its use in industry, e.g. in the treatment of sticky cotton fibers in textile factories.
This work was supported by the CNRS (PhD scholarship of AL) and by the University of Lyon1. We
acknowledge access to beamlines at the European Synchrotron Radiation facility (ESRF, Grenoble,
France) and at Swiss Light Source (SLS, Paul Sherrer Institute, Switzerland) and the excellent support
by the beamline scientists.
AMSEDgenetique Association is gratefully acknowledged for its financial support to our research and
Valérie Gisclard for her constant support.
References:
[1] X. Bai et al., 2001, J. Biol. Chem., 276, 48189-48195
[2] F. Malfait, et al., 2013, Am. J. Hum. Genet., 92, 935-945
[3] M. Nakajima et al., 2013, Am. J. Hum. Genet., 92, 927–934
50
51
Liste des posters
Marie Couturier, David Navarro, Didier Chevret, Bernard Henrissat, François Piumi, Francisco Ruiz-Dueñas, Angel Martinez, Igor Grigoriev, Robert Riley, Anna Lipzen,
Jean-Guy Berrin, Emma R Master & Marie-Noëlle Rosso : Degradation of wood by the Carbohydrate-Active Enzyme set of the fungus Pycnoporus coccineus .........................
33
Marie Schuler, Stéphanie Marquès, Domenico Romano, Maria Domingues & Arnaud Tatibouët : From Carbohydrate-Based Thioimidate N-Oxides to Iminosugars
Derivatives ..............................................................................................................................................................................................................................................................................................
33
P-03
Arnaud Masselin, Stéphanie Pradeau, Sylvain Cottaz & Sébastien Fort : Enzym’n click synthesis of chitinoligosaccharide probes for plant biology ..............................................
34
P-04
Maxime Delos, François Foulquier, Charles Hellec, Fabrice Allain & Agnès Denys : Subcellular localization of heparan 3-OST2, 3A and 3B ...........................................................
34
P-05
Simon Ladevèze, Bernard Henrissat & Jean-Guy Berrin : Characterization of Fungal Lytic Polysaccharide MonoOxygenases ...................................................................................
35
P-06
B. Ayela, T. Poisson, X. Pannecoucke & C. Lopin-Bon : Total synthesis of modified oligosaccharides from the linkage region of proteoglycans as potential inhibitors or
effectors of the enzyme CSGalNAcT-1 .............................................................................................................................................................................................................................................
35
Yves Queneau, Elie Derrien, Catherine Pinel, Michèle Besson, Mohammed Ahmar, Emilie Martin-Sisteron, Guy Raffin & Philippe Marion : Catalytic aerobic oxidation of
reducing sugars issued from softwood hemicellulose acid hydrolysis .........................................................................................................................................................................................
36
Clément Delannoy, Yoann Rombouts, Sophie Groux-Degroote, Stephanie Holst, Bernadette Coddeville, Anne Harduin-Lepers, Manfred Wuhrer, Elisabeth Elass & Yann
Guérardel : Deciphering the glycosylation changes occurring during the differentiation and the activation of monocytic THP-1 cell line into macrophages ....................................
36
Barbara Guyez, Franck Moncassin, Claire Raingeval, Sophie Bozonnet, Bernard Henrissat, Lionel Mourey, Michael O’Donohue, Samuel Tranier & Claire Dumon :
Structural and functional characterization of a hypothetical new glycoside hydrolase .............................................................................................................................................................
37
Maxime Mock-Joubert, Christine Le Narvor, David Bonnaffé & Romain Vivès : Synthesis of putative inhibitors for the human endosulfatase, H-sulf 2, a new therapeutic
target in cancer and inflammatory diseases .....................................................................................................................................................................................................................................
37
P-11
Hélène Ledru & Chrystel Lopin-Bon : Preparation of various sulfoforms of oligosaccharides for the study of proteoglycans biosynthesis ..................................................................
38
P-12
Silvia Achilli, Blanka Didak, Corinne Vivès, Michel Thépaut, Ludovic Landemarre & Franck Fieschi : C-type lectins receptors (CLRs) arrays to screen immunocompatibility
and reactivity of biological sample ......................................................................................................................................................................................................................................................
38
Alexandre Méry, Lin Shen, Albertus Viljoen, Sydney Villaume, Christophe Mariller, Stéphane Vincent, Laurent Kremer & Yann Guérardel : Le catabolisme de la paroi
mycobactérienne ...................................................................................................................................................................................................................................................................................
39
Maria Dominguès, Marie Schuler, Justyna Jaszczyk, Pierre Lafite, Richard Daniellou, Isabel Ismael & Arnaud Tatibouët : OZO derived iminosugars. The one-pot RetroMichael/Michael addition solution .......................................................................................................................................................................................................................................................
39
P-01
P-02
P-07
P-08
P-09
P-10
P-13
P-14
P-15
P-16
1,4
Anne-Sophie Vercoutter-Edouart, Olivier Massinon, Marlène Mortuaire, Maïté Leturcq, Tony Lefebvre & Stéphane Vincent : Synthesis of glycosides restrained in a B
boat conformation. Impact on the in vitro activity of the β-N-acetylhexosaminidase C (O-GlcNAcase) and the intracellular O-GlcNAcylation levels in human cell lines ..............
40
Charles Hellec, Agnès Denys, Maxime Delos, Mathieu Carpentier & Fabrice Allain : Role of heparan sulfate 3-O-sulfotransferases in cancer cell proliferation and survival....
40
®
P-17
Blanka Didak, Alexiane Decout, Eric Duverger & Ludovic Landemarre : GLYcoPROFILE : deciphering the sweet side of cells ...................................................................................
41
P-18
A. Bordes, N. Fontelle, J. Désiré, F. Lecornué, J. Guillard & Y. Blériot : Iminosugars-based macrocycles to deliver new sweet azacrowns ...............................................................
41
P-19
Irina Sadovskaya, Evgeny Vinogradov, Anneleen Cornelissen, Thierry Grard, Stéphanie Blangy, Silvia Spinelli, Eoghan Casey, Jennifer Mahony, Jean-Paul Noben, Fabio
Dal Bello, Christian Cambillau & Douwe van Sinderen : Structural investigation of cell surface assossiated polysaccharides of Lactobacillus delbrueckii subsp. bulgaricus
17 as potential substrates for bacteriophage Ld17 glycerophosphodiesterase .........................................................................................................................................................................
42
52
P-20
P-21
P-22
P-23
P-24
P-25
P-26
P-27
P-28
P-29
P-30
P-31
P-32
P-33
P-34
Joana Rocha, Milène Nitenberg, Eric Maréchal, Agnès Girard-Egrot, Maryse Block & Christelle Breton : Structural aspects and membrane binding properties of MGD1,
the major galactolipid synthase in plants ..........................................................................................................................................................................................................................................
42
Franck Daligault, Romain Irague, Benoît David, Diane Jouanneau, Mirjam Czjzek, Yves-Henri Sanejouand & Charles Tellier : Mutations within a water channel change the
balance between transglycosylation and hydrolysis in Agarase ...................................................................................................................................................................................................
43
Marie Buchotte, Petra Hellwig, Franck Borel, Jean-Luc Ferrer, Myriam Seemann & Jean-Bernard Behr : Synthetic access to MecPP and analogues thereof using Dgalactose as a chiral scaffold ..............................................................................................................................................................................................................................................................
43
Bernadette Coddeville, Yann Guérardel, Frédéric Krzewinski, Emmanuel Maes, Dounia Mouajjah, Olga Plechakova, Martine Ratajczak, Xavier Trivelli & Nao Yamakawa :
PAGés platform : a tool for glycan analysis ......................................................................................................................................................................................................................................
44
Eva-Maria Krammer, Emmanuel Maes, Nao Yamakawa, Jérôme De Ruyck, Gérard Vergoten, Stefan Oscarson, Mohamed Touaibia, René Roy & Julie Bouckaert : New
nanomolar biphenyl C-mannopyranoside ligands reveal unprecedented binding modes in the FimH adhesin of Escherichia coli .................................................................................
44
Isabelle Bertin-Jung, Anne Robert, Sandrine Gulberti, Chrystel Lopin-Bon, Jean-Claude Jacquinet, Sylvie Fournel-Gigleux : Fluorescent screening of glyco-active
compounds with GlycoFluo technology .............................................................................................................................................................................................................................................
45
U. Alali, M. Taouai, S. Kravchenko, C. Epoune, D. Arosio, A. Bernardi & A. Siriwardena : Chemical synthesis of multivalent chemical probes and their study as modulators
of multivalent glycan-protein interactions ..........................................................................................................................................................................................................................................
45
Baptiste Schindler, Loic Barnes, Abdul-Rahman Allouche, Stéphane Chambert & Isabelle Compagnon : Infrared Multiple Photon Dissociation Spectroscopy: a new
powerful technique for structural characterization of carbohydrates ..........................................................................................................................................................................................
46
Amena Butt, Hanna Hlawaty, Oualid Haddad, Erwan Guyot, Christelle Laguillier-Morizot, Carole Planès, Olivier Oudar, Nathalie Charnaux & Angela Sutton : Angiogenesis
in hypoxic conditions: implication of the syndecan-4 ectodomain shedding...............................................................................................................................................................................
46
Agata Steenackers, Vanessa Dehennaut, Stéphanie Olivier-Van Stichelen, Tony Lefebvre & Ikram El Yazidi-Belkoura : Expression of OGT correlates with migration and
proliferation of colon cell lines ............................................................................................................................................................................................................................................................
47
Alexandre Guillot, Manuel Dauchez, Nicolas Belloy, Jessica Jonquet, Laurent Duca, Béatrice Romier, Pascal Maurice, Laurent Debelle, Laurent Martiny, Vincent Durlach,
Sébastien Blaise & Stéphanie Baud : Impact of sialic acids on the molecular dynamic of bi-antennary and tri-antennary glycans................................................................................
47
Maïté Leturcq, Marlène Mortuaire, Tony Lefebvre & Anne-Sophie Vercoutter-Edouart : The MCM2-7 helicase complex is glycosylated by O-GlcNAc Transferase. Towards
a new role of OGT in the regulation of DNA replication .................................................................................................................................................................................................................
48
Estelle Gallienne, Anna Biela-Banas, Sophie Front & Olivier R. Martin : Iminosugar-Based Galactoside Mimics as Pharmacological Chaperones for Lysosomal βGalactosidases.......................................................................................................................................................................................................................................................................................
48
Dominique Heymann, Carmen Ruiz-Velasco, Julie Chesneau, Jacqueline Ratiskol, Corinne Sinquin & Sylvia Colliec-Jouault : Anti-Metastatic Properties of a Marine
Bacterial Exopolysaccharide-Based Derivative Designed to Mimic Glycosaminoglycans .......................................................................................................................................................
49
François Thomas, Robert Larocque, Yongtao Zhu, Mark J. McBride, Tristan Barbeyron, Mirjam Czjzek & Gurvan Michel : Deciphering the complex alginolytic system of
the marine bacterium Zobellia galactanivorans ...............................................................................................................................................................................................................................
49
P-35
Xiaomeng Pang, Anne Robert, Isabelle Bertin-Jung, Tim Van Damme, Fransiska Malfait, Sandrine Gulberti & Sylvie Fournel-Gigleux : B3GALT6 mutations causes a
pleiotropic form of Ehlers-Danlos syndrome (EDS) due defects in glycosaminoglycan biosynthesis ................................................................................................................................... 50
P-36
Alexandra Lipski, Sébastien Violot, Hildegard Watzlawick, Richard Haser, Ralf Mattes & Nushin Aghajari : Structural and Functional Studies of a Trehalulose Hydrolase
MutA from Rhizobium sp. .....................................................................................................................................................................................................................................................................
Les CO-01, 02, 06, 07, 09, 10 et 14 présenteront également leurs résultats sous forme de posters (P-37 à P-43).
53
50
Liste des participants
Silvia ACHILLI
IBS, UMR CEA-CNRS-UGA 5075
Grenoble
[email protected]
Stéphanie BAUD
MEDyC, UMR 7369
Reims
[email protected]
Nathalie BOURGOUGNON
LBCM, Univ. Bretagne Sud
Vannes
[email protected]
Giuliano CUTOLO
ICOA, UMR 7311
Orléans
[email protected]
Claire DUMON
LISBP
Toulouse
[email protected]
Nushin AGHAJARI
MMSB, UMR 5086
Lyon
[email protected]
Jean-Bernard BEHR
ICMR, UMR 7312
Reims
[email protected]
Christelle BRETON
Cermav, UPR CNRS 5301
Grenoble
[email protected]
Samir DAHBI
ICOA, UMR 7311
Orléans
[email protected]
Ikram EL YAZIDI - BELKOURA
UGSF, UMR Lille1-CNRS 8576
Villeneuve d’Ascq
[email protected]
Urjwan ALALI
LG2A, UMR 7378
Amiens
[email protected]
Isabelle BERTIN-JUNG
ImoPA, UMR 7365
Vandoeuvre-lès-Nancy
[email protected]
Laurine BUON
Cermav, UPR CNRS 5301
Grenoble
[email protected]
Franck DALIGAULT
UFIP, UMR 6286
Nantes
[email protected]
Régis FAURÉ
LISBP
Toulouse
[email protected]
Fabrice ALLAIN
UGSF, UMR Lille1-CNRS 8576
Villeneuve d’Ascq
[email protected]
Yves BLERIOT
IC2MP, UMR 7285
Poitiers
[email protected]
Amena BUTT
LVTS, Inserm, U1148
Bobigny
[email protected]
Richard DANIELLOU
ICOA, UMR 7311
Orléans
[email protected]
Vincent FERRIERES
ENSCR, UMR 6226
Rennes
[email protected]
Sylvie ARMAND
Cermav, UPR CNRS 5301
Grenoble
[email protected]
Claire BOISSET
Cermav, UPR CNRS 5301
Grenoble
[email protected]
Michèle CARRET
Cermav, UPR CNRS 5301
Grenoble
[email protected]
Benoît DARBLADE
Elicityl
Crolles
[email protected]
www.elicityl-oligotech.com
Elizabeth FICKO-BLEAN
Marine Glycobiology, UMR 8227
Roscoff
[email protected]
Rachel AUZELY
Cermav, UPR CNRS 5301
Grenoble
[email protected]
David BONNAFFÉ
ICMMO, UMR 8182
Orsay
[email protected]
Valérie CHAZALET
Cermav, UPR CNRS 5301
Grenoble
[email protected]
Benjamin AYELA
ICOA, UMR 7311
Orléans
[email protected]
Silvère BONNET
Elicityl
Crolles
[email protected]
www.elicityl-oligotech.com
Luc CHEVRIER
Elicityl
Crolles
[email protected]
www.elicityl-oligotech.com
Véronique BONNET
LG2A, UMR 7378
Amiens
[email protected]
Sylvia COLLIEC-JOUAULT
Ifremer, Laboratoire EM3B
Nantes
[email protected]
Maxime DELOS
UGSF, UMR Lille1-CNRS 8576
Villeneuve d’Ascq
[email protected]
Alexandra BORDES
IC2MP, UMR 7285
Poitiers
[email protected]
Isabelle COMPAGNON
Institut Lumière Matière, UMR 5306
Villeurbanne
[email protected]
Agnès DENYS
UGSF, UMR Lille1-CNRS 8576
Villeneuve d’Ascq
[email protected]
Julie BOUCKAERT
UGSF, UMR Lille1-CNRS 8576
Villeneuve d’Ascq
[email protected]
Marie COUTURIER
BBF, UMR 1163
Marseille
[email protected]
Blanka DIDAK
GLYcoDiag
Orléans
[email protected]
Steffi BALDINI
UGSF, UMR Lille1-CNRS 8576
Villeneuve d’Ascq
[email protected]
Muriel BARDOR
Glyco-MEV, EA4358, UNIROUEN
Rouen
[email protected]
Ludovic BASTIDE
Elicityl
Crolles
[email protected]
www.elicityl-oligotech.com
54
Clément DELANNOY
UGSF, UMR Lille1-CNRS 8576
Villeneuve d’Ascq
[email protected]
Philippe DELANNOY
UGSF, UMR Lille1-CNRS 8576
Villeneuve d’Ascq
[email protected]
Etienne FLEURY
IMP INSA, UMR 5223
Lyon
[email protected]
Sébastien FORT
Cermav, UPR CNRS 5301
Grenoble
[email protected]
François FOULQUIER
UGSF, UMR Lille1-CNRS 8576
Villeneuve d’Ascq
[email protected]
Frederic FRISCOURT
IECB/INCIA, UMR 5287
Pessac
[email protected]
Estelle GALLIENNE
ICOA, UMR 7311
Orléans
[email protected]
Emilie GILLON
Cermav, UPR CNRS 5301
Grenoble
[email protected]
Simon LADEVEZE
BBF, UMR 1163
Marseille
[email protected]
Maxime MOCK-JOUBERT
ICMMO, UMR 8182
Orsay
[email protected]
Cédric PEYROT
ICOA, UMR 7311
Orléans
[email protected]
Baptiste SCHINDLER
Institut Lumière Matière, UMR 5306
Villeurbanne
[email protected]
Sébastien GOUIN
CEISAM, UMR 6230
Nantes
[email protected]
Hélène LEDRU
ICOA, UMR 7311
Orléans
[email protected]
Solange MORERA
I2BC, UMR 9198
Gif sur Yvette
[email protected]
Jacques PRANDI
IPBS, UMR 5089
Toulouse
[email protected]
Marie SCHULER
ICOA, UMR 7311
Orléans
[email protected]
Tony LEFEBVRE
UGSF, UMR Lille1-CNRS 8576
Villeneuve d’Ascq
[email protected]
Dounia MOUAJJAH
UGSF, UMR Lille1-CNRS 8576
Villeneuve d’Ascq
[email protected]
Loïc LEMIEGRE
ENSCR, UMR 6226
Rennes
[email protected]
Claire MOULIS
LISBP
Toulouse
[email protected]
Jacques LE PENDU
CRCNA, UMR 892 Inserm/6299 CNRS
Nantes
[email protected]
Laurence MULARD
UCB, Institut Pasteur
Paris
[email protected]
Patrice LEROUGE
Glyco-MEV, EA4358, UNIROUEN
Rouen
[email protected]
Jérôme NIGOU
IPBS, UMR 5089
Toulouse
[email protected]
Mialy RANDRIANTSOA
Elicityl
Crolles
[email protected]
www.elicityl-oligotech.com
Milène NITENBERG
Cermav, UPR CNRS 5301
Grenoble
[email protected]
Caroline RÉMOND
UMR, INRA-URCA FARE
Reims
[email protected]
Chrystel LOPIN-BON
ICOA, UMR 7311
Orléans
[email protected]
Mehdi OMRI
LG2A, UMR 7378
Amiens
[email protected]
Olivier RENAUDET
DCM, UMR UGA-CNRS 5250
Grenoble
[email protected]
Emmanuel MAES
UGSF, UMR Lille1-CNRS 8576
Villeneuve d’Ascq
[email protected]
Xiaomeng PANG
ImoPA, UMR 7365
Vandoeuvre-lès-Nancy
[email protected]
Emeline RICHARD
Cermav, UPR CNRS 5301
Grenoble
[email protected]
Arnaud MASSELIN
Cermav, UPR CNRS 5301
Grenoble
[email protected]
Corinne PAU-ROBLOT
BioPI, EA3900, Univ. Picardie
Amiens
[email protected]
Anne ROBERT
ImoPA, UMR 7365
Vandoeuvre-lès-Nancy
[email protected]
Alexandre MERY
UGSF, UMR Lille1-CNRS 8576
Villeneuve d’Ascq
[email protected]
Jérôme PELLOUX
BioPI, EA3900, Univ. Picardie
Amiens
[email protected]
Catherine RONIN
Siamed’Xpress
Gardanne
[email protected]
Jean-Claude MICHALSKI
UGSF, UMR Lille1-CNRS 8576
Villeneuve d’Ascq
[email protected]
Serge PEREZ
DPM, UMR UGA-CNRS 5063
Grenoble
[email protected]
Irina SADOVSKAYA
Equipe BPA, Univ. Littoral-Côte d’Opale
Boulogne-sur-mer
[email protected]
Cyrille GRANDJEAN
UFIP, UMR 6286
Nantes
[email protected]
Marcelo GUERIN
CIC BioGUNE
Derio, spain
[email protected]
Alexandre GUILLOT
MEDyC, UMR 7369
Reims
[email protected]
Sandrine GULBERTI
ImoPA, UMR 7365
Vandoeuvre-lès-Nancy
[email protected]
Barbara GUYEZ
IPBS et LISBP
Toulouse
[email protected]
William HELBERT
Cermav, UPR CNRS 5301
Grenoble
[email protected]
Charles HELLEC
UGSF, UMR Lille1-CNRS 8576
Villeneuve d’Ascq
[email protected]
Thomas HURTAUX
UGSF, UMR Lille1-CNRS 8576
Villeneuve d’Ascq
[email protected]
Boutros KERBAJE
LIBIOS
Pontcharra Sur Turdine
[email protected]
www.libios.fr
Maïté LETURCQ
UGSF, UMR 8576
Villeneuve d’Ascq
[email protected]
55
Cédric PRZYBYLSKI
IPCM, UMR 8232
Paris
[email protected]
Yves QUENEAU
ICBMS, UMR 5246
Villeurbanne
[email protected]
Françoise QUIGNARD
ICGM, UMR 5253
Montpellier
[email protected]
Arnaud TATIBOUET
ICOA, UMR 7311
Orléans
[email protected]
Charles TELLIER
UFIP, UMR 6286
Nantes
[email protected]
François THOMAS
LBI2M, UMR 8227
Roscoff
[email protected]
Annabelle VARROT
Cermav, UPR CNRS 5301
Grenoble
[email protected]
Anne-Sophie VERCOUTTER-EDOUART
UGSF, UMR Lille1-CNRS 8576
Villeneuve d'Ascq
[email protected]
Romain VIVES
IBS, UMR CEA-CNRS-UGA 5075
Grenoble
[email protected]
Joanne XIE
PPSM, UMR 8531
Cachan
[email protected]
Nao YAMAKAWA
UGSF, UMR Lille1-CNRS 8576
Villeneuve d'Ascq
[email protected]
Agata ZYKWINSKA
Ifremer, Laboratoire EM3B
Nantes
[email protected]
Glycoproducts for life sciences
Oligosaccharides & Polysaccharides
Free & functionalized glycans
Glycoconjugates
Extraction from biomass
Biosynthesis by fermentation
Lectins
Customized products & services
Analysis
R&D contracts
[email protected]
ph +33 476 407 161
fax +33 476 559 950
Elicityl SA
746 avenue Ambroise Croizat
F-38920 - Crolles - France
www.elicityl-oligotech.com
56
Siamed'Xpress innove dans les dosages sanguins en dépistant
précocément les troubles de la thyroïde ,
évocateurs des expositions aux polluants
L’entreprisevientdevalidersestestsdedépistageprécocedestroublesdelathyroïde
sur plus de 1300 patients. Elle souhaite à présent porter au marché les premiers
dosages harmonisés compatibles avec la Santé connectée et développer différents
partenariatsstratégiques.
SiaMed’Xpress développe des protéines humaines dont le glycoprofil hypersialylé est
pour la première fois, en tout point identique à celles qui sont présentes dans notre
circulation. Les biomarqueurs ainsi développés peuvent avantageusement servir à
construire des dosages plus précis, de valeur diagnostique précoce sur la base d’une
calibrationmassiquerépondantauxnouvellesnormesinternationales.
Les avancées technologiques développées par SiaMed’Xpress au cours de ses 5
dernières années sur l’ingénierie des protéines glycosylées ont également permis de
finaliser plusieurs preuves de concept sur des biomolécules d’usage thérapeutique
majeuretd’engagerdifférentsprojetspartenariaux.
Siamed'Xpress s'adresse à Wiseed
pour financer l'accès au marché de ses dosages
https://www.wiseed.com/fr/startups/siamed-xpress
57
Editeurs
C. Breton, S. Armand & M. Carret, Cermav, 2016
© Logo
Kawthar Bouchemal
Illustration couverture
M. Carret d’après photo J.L. Rigaux
Impression
Impression et Ressources en Imagerie Scientique (IRIS)
Grenoble INP, 1025 rue de la Piscine, 38402 Saint Martin d’Hères
Programme
Lundi 23 mai
8h45
9h15
9h45
Mardi 24 mai
Mercredi 25 mai
CI-02 F. Foulquier
CI-09
CO-1 S. Baldini (Prix BF-AV)
CO-2 G. Cutolo
CI-03 F. Friscourt
J. Nigou
Jeudi 26 mai
Vendredi 27 mai
CI-13 M. Bardor
CI-20 C. Przybylski
CO-09 E. Richard
CO-10 J. Xie
CO-13 E. Ficko-Blean
CO-14 C. Pau-Roblot
Duo2 S. Dahbi & I. Bertin-Jung
CI-10
CI-14 J. Pelloux
CI-21 D. Bonnaffé
L. Mulard
10h15 : Pause café
10h45
11h15
11h45
CI-04 C. Grandjean
CI-11
M. E. Guerin
CO-3 A. Varrot
CO-4 S. Gouin
CO-11 T. Hurtaux
CO-12 R. Fauré
CO-15 C. Peyrot
CO-16 I. Compagnon
CI-05 O. Renaudet
CI-12
CI-16
Y. Blériot
12h15
ACCUEIL
et
Montage des posters
16h30
18h30
19h00
19h30
CO-5 C. Dumon
CO-6 M. Omri
Session POSTERS (nos pairs)
CI-07 F. Quignard
16h00 : Pause café
CI-08 N. Bourgougnon
17h00
17h45
E. Fleury
CI-06 C. Moulis
15h00
17h30
C. Rémond
Déjeuner
14h30
15h30
CI-15
Après-midi libre
(randonnée, visites)
CO-7 A. Zykwinska CO-8 V. Bonnet
16h00 : Pause café
CI-17 R. Daniellou (Prix GFG)
CI-18 C. Ronin
CI-19 S. Pérez
CEREMONIE D'OUVERTURE
CI-01 J. Le Pendu
Session POSTERS (nos impairs)
Duo1 S. Morera & Y. Queneau
ASSEMBLEE GENERALE GFG
Apéritif d'accueil
Dîner
Dîner de gala
60
Soirée dansante
CEREMONIE DE CLOTURE